; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019436 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019436
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr12:13054815..13055699
RNA-Seq ExpressionIVF0019436
SyntenyIVF0019436
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025749.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.22e-2670.89Show/hide
Query:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKG
        ME ESSN+KKN+ S+E KEKS           GHMSKDCVNKK MVIRNGIIDSKD+CDE+DAPLE+ESDAHD+EYI+G
Subjt:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKG

KAA0066461.1 uncharacterized protein E6C27_scaffold21G005620 [Cucumis melo var. makuwa]2.29e-1453.16Show/hide
Query:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAH-DNEYIK
        +E ESSNTKK ++S+EV+EK+           GHMSKDC+NK+ MV+RNG+IDS+D+C+E DA LE+E +   D+EYI+
Subjt:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAH-DNEYIK

KGN53753.1 hypothetical protein Csa_014547 [Cucumis sativus]4.96e-2569.51Show/hide
Query:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKGERM
        MEVESSNTK N  S+EVKEKS          +GHMSKD VNKK MVIRN IIDSK++CDE+DAPLE+ESDAHD+EYI+ ERM
Subjt:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKGERM

TYK06180.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]3.85e-2569.62Show/hide
Query:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKG
        ME ESSN+KKN+ S+E KEKS           GHMSKDCVNKK MVIRNGIIDSKD+ DE+DAPLE+ESDAHD+EYI+G
Subjt:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKG

XP_038902374.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120089011 [Benincasa hispida]1.03e-1455.13Show/hide
Query:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIK
        +E  S+ TKKN+ S+E ++KS           GH+SKDCVNKK MVIRNGIIDS+++CDE  + LE+ES+A D+EYIK
Subjt:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIK

TrEMBL top hitse value%identityAlignment
A0A0A0KW07 Uncharacterized protein8.8e-1869.51Show/hide
Query:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKGERM
        MEVESSNTK N  S+EVKEKS          +GHMSKD VNKK MVIRN IIDSK++CDE+DAPLE+ESDAHD+EYI+ ERM
Subjt:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKGERM

A0A5A7SKE7 Transposon Ty3-I Gag-Pol polyprotein3.2e-2070.89Show/hide
Query:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKG
        ME ESSN+KKN+ S+E KEKS           GHMSKDCVNKK MVIRNGIIDSKD+CDE+DAPLE+ESDAHD+EYI+G
Subjt:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKG

A0A5A7VLF9 CCHC-type domain-containing protein2.7e-1153.16Show/hide
Query:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAH-DNEYIK
        +E ESSNTKK ++S+EV+EK+           GHMSKDC+NK+ MV+RNG+IDS+D+C+E DA LE+E +   D+EYI+
Subjt:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAH-DNEYIK

A0A5D3C4C3 Transposon Ty3-I Gag-Pol polyprotein4.7e-1969.62Show/hide
Query:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKG
        ME ESSN+KKN+ S+E KEKS           GHMSKDCVNKK MVIRNGIIDSKD+ DE+DAPLE+ESDAHD+EYI+G
Subjt:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKG

A0A5D3CCP8 CCHC-type domain-containing protein3.6e-1153.16Show/hide
Query:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAH-DNEYIK
        +E ESSNTKK + S+EV+EK+           GHMSKDC+NK+ MV+RNG+IDS+D+C+E DA LE+E +   D+EYI+
Subjt:  MEVESSNTKKNDTSREVKEKSR---------IGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAH-DNEYIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTGAGAGCTCCAACACTAAAAAGAATGACACTTCAAGGGAGGTAAAGGAGAAGTCTAGGATTGGACACATGAGCAAAGATTGTGTCAATAAAAAATTCATGGT
GATAAGAAATGGGATAATTGATTCAAAAGACAAATGTGATGAGTATGATGCACCACTTGAGAAAGAATCCGATGCCCATGACAATGAATACATTAAAGGAGAAAGAATGT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTGAGAGCTCCAACACTAAAAAGAATGACACTTCAAGGGAGGTAAAGGAGAAGTCTAGGATTGGACACATGAGCAAAGATTGTGTCAATAAAAAATTCATGGT
GATAAGAAATGGGATAATTGATTCAAAAGACAAATGTGATGAGTATGATGCACCACTTGAGAAAGAATCCGATGCCCATGACAATGAATACATTAAAGGAGAAAGAATGT
GA
Protein sequenceShow/hide protein sequence
MEVESSNTKKNDTSREVKEKSRIGHMSKDCVNKKFMVIRNGIIDSKDKCDEYDAPLEKESDAHDNEYIKGERM