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IVF0019449 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019449
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDynein light chain
Genome locationtig00000430:829340..832539
RNA-Seq ExpressionIVF0019449
SyntenyIVF0019449
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR019763 - Dynein light chain, type 1/2, conserved site
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134221.1 dynein light chain 1, cytoplasmic [Cucumis sativus]7.89e-7694.17Show/hide
Query:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_016898981.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]7.29e-81100Show/hide
Query:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_022945423.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]6.31e-6179.17Show/hide
Query:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +S+R+  +P P +VK ES +DRKPSS +P+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_022973755.1 dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima]1.01e-5975.83Show/hide
Query:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +S+R+     PS++    ++DRKPSS +P+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_038904701.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]3.96e-6485.83Show/hide
Query:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN ES R+  +PPP +VK ES DDRKPSS + +SKKIVIKSADMF+DMQKEAID AIAAFEKHSVEKDIAEQIKK+FDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

TrEMBL top hitse value%identityAlignment
A0A0A0LAM1 Dynein light chain1.6e-5694.17Show/hide
Query:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A1S4DSP2 Dynein light chain2.4e-60100Show/hide
Query:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A5D3CY39 Dynein light chain9.0e-4497.89Show/hide
Query:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGS
        MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNF +
Subjt:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGS

A0A6J1G0U9 Dynein light chain3.6e-4579.17Show/hide
Query:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +S+R  ++P P +VK ES +DRKPSS +P+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A6J1IC60 Dynein light chain3.1e-4475.83Show/hide
Query:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +S+R+     PS++    ++DRKPSS +P+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic6.4e-3171.59Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        + +K VIK+ADM  DMQ++AID A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  LSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q3MHR3 Dynein light chain 2, cytoplasmic1.1e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q78P75 Dynein light chain 2, cytoplasmic1.1e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q96FJ2 Dynein light chain 2, cytoplasmic1.1e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q9D0M5 Dynein light chain 2, cytoplasmic1.1e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein2.8e-1341.67Show/hide
Query:  IKSADMFTDMQKEAIDAA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS
        ++++DM    Q  A   +   + A    +  K +A  +KK+FD  +GP WHCIVG +FGSYVTH T  F+YF +D+  +LLFK+
Subjt:  IKSADMFTDMQKEAIDAA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS

AT1G52240.2 RHO guanyl-nucleotide exchange factor 116.9e-1240.91Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVE--KDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK
        L  K +++ +DM   MQ +A+  A  A +   V   K IA  IKKEFD+ +G  W C+VG NFG + TH    F+YF L+    L+FK
Subjt:  LSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVE--KDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK

AT4G15930.1 Dynein light chain type 1 family protein3.0e-3977.67Show/hide
Query:  DDRKPSSPS-----PLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLF
        DDR+ S P      P  K+ VIKSADM  DMQKEAI+ AI+AFEK+SVEKDIAE IKKEFDK HG TWHCIVGRNFGSYVTHETNHFVYFYLDQKA+LLF
Subjt:  DDRKPSSPS-----PLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLF

Query:  KSG
        KSG
Subjt:  KSG

AT4G27360.1 Dynein light chain type 1 family protein2.0e-1142.05Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEK--DIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK
        L  K V+   DM   M+++A+  A  A +   V +   IA  IKKEFD+++G  W CIVG +FGS+VTH +  F++F +    ILLFK
Subjt:  LSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEK--DIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK

AT5G20110.1 Dynein light chain type 1 family protein8.7e-1550Show/hide
Query:  IKSADMFTDMQKEAIDAA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS
        I +ADM   MQ  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FGS+VTH T  F+YF +D+  +LLFK+
Subjt:  IKSADMFTDMQKEAIDAA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTAGAATCTCGACGCACCACCAATCATCCTCCACCTTCAATTGTGAAGACTGAATCTACAGATGATCGCAAACCCTCATCTCCCTCTCCCCTCTCCAAGAAAAT
CGTCATCAAGAGCGCCGATATGTTCACCGACATGCAGAAGGAAGCTATTGACGCTGCCATAGCCGCATTTGAGAAGCATTCCGTTGAGAAGGATATTGCCGAACAGATAA
AGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGTTCTTACGTGACACACGAAACAAACCATTTTGTTTACTTCTACCTCGAT
CAGAAAGCAATTCTACTTTTCAAATCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
AGAAGAGCGGGTAGAGAGGACGACTGGGCGACGGGAATCTTACAGAAGAGACGGCAGAGTGATAGTGGTTGAGAGCGATACCCTCTTCTTCTCTCTCACTCTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCATCTCTTACCCACCTAAACCAAACAAAATATTCTCTCCCAAAACTCCATCACAATCATGAACCTAGAATCTCGACGCACCACCAATCATC
CTCCACCTTCAATTGTGAAGACTGAATCTACAGATGATCGCAAACCCTCATCTCCCTCTCCCCTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCACCGACATG
CAGAAGGAAGCTATTGACGCTGCCATAGCCGCATTTGAGAAGCATTCCGTTGAGAAGGATATTGCCGAACAGATAAAGAAAGAGTTTGATAAGAATCATGGACCCACCTG
GCATTGCATCGTCGGTCGTAATTTTGGTTCTTACGTGACACACGAAACAAACCATTTTGTTTACTTCTACCTCGATCAGAAAGCAATTCTACTTTTCAAATCTGGTTGAG
GATTGTTGTCCCCTTGAAAAAGATGCCACCAGCTACTATGGCGAGCTTGCGATAATGCTACTACAACTGTTTCTTGTATGTATAATTTAGTCTGCCAGTGTATGTAAGTA
AATCAGCTGGTGTAGCATTTTCTATATTATAACTGTTATATATATATATATATATATATATATATATATATCACTGGGGGAGTAGATTAAATGGTGAAACAAGAAATTCG
ATATGCCATTCACATAATGTCTCAGAAAAGGGCCTCTTTGTCAATGTCATTAAAACAAAAGGGTGCAGTAAAAGCTTCAAAAAGAAAAAGAAAATGCTGTGTCATTGGCC
AAATGGTCACTGTCGTTTGAAATTTTGTCATTACTTCTTGATAGAGGAGTTTATGTTTTCTGGTTCAATTTTCAAATATTGCCTTGGAAGTTGTTTTGGTTTAGAAGAGT
AAATGCACTAGCGGAGTAGAACAAGTACAATACAAAGATAGGGTGTAGTAAAAAGGGGTAAAAACAGACTGGAATTTTGAAAGAAAGAATTTTTGTACTGTTGCTGAATA
AAGGAAGGAGTTAAAGGTGATGGGTATGTATATTTAGTAGTAGAGAAATGAGATTTTGCTGTGTAGATTTGATTTATTGCTCTTCATTATTTCTTTTTATTTCATGTAAT
GGTTTGCTCTTTTACACAGCTTAGCAGCACCCTGCCCTCAACTTTCTTAGGCAGGGGAGGAACTTTGGGGCCTTTGTTCTTGAAAATTATGGTATAGTCATGAGTGTGTG
GTAATATTAAGGATTTGTAGTCTTGAATTTTTGTTTTATATTTCCAGCTTTGCTTAATTTGGTAAAGCCATGTTTGTTT
Protein sequenceShow/hide protein sequence
MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLD
QKAILLFKSG