CuGenDBv2

Gene ID	IVF0019454
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Genome location	chr05:25358732..25360828
RNA-Seq Expression	IVF0019454
Synteny	IVF0019454
Gene Ontology terms	NA
InterPro domains	IPR019188 - Small nuclear RNA activating complex (SNAPc), subunit SNAP43

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0063525.1 putative mediator of RNA polymerase II transcription subunit 26 isoform X1 [Cucumis melo var. makuwa]

1.56e-201

100

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Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
        KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV

KAE8651536.1 hypothetical protein Csa_019424 [Cucumis sativus]

6.97e-188

96.83

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAY KLFNDTPI NYIHMDLGMEVGSN+LTKMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
        KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQ +PVEADQQLLEDH DVNFDKELERMLTDV
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV

XP_008457139.1 PREDICTED: uncharacterized protein LOC103496883 isoform X1 [Cucumis melo]

1.28e-200

99.3

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Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELV+DAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
        KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDV+FDKELERMLTDV
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV

XP_008457155.1 PREDICTED: uncharacterized protein LOC103496883 isoform X2 [Cucumis melo]

4.83e-198

98.94

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELV+DAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
        KKLALY ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDV+FDKELERMLTDV
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV

XP_031737111.1 uncharacterized protein LOC101216308 isoform X1 [Cucumis sativus]

2.28e-194

96.83

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAY KLFNDTPI NYIHMDLGMEVGSN+LTKMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
        KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQ +PVEADQQLLEDH DVNFDKELERMLTDV
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL25 Uncharacterized protein

5.2e-151

96.83

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAY KLFNDTPI NYIHMDLGMEVGSN+LTKMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
        KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQ +PVEADQQLLEDH DVNFDKELERMLTDV
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV

A0A1S3C4E1 uncharacterized protein LOC103496883 isoform X1

9.2e-156

99.3

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELV+DAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
        KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDV+FDKELERMLTDV
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV

A0A1S3C4X9 uncharacterized protein LOC103496883 isoform X2

6.6e-154

98.94

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELV+DAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
        KKLALY ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDV+FDKELERMLTDV
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV

A0A5A7VCA1 Putative mediator of RNA polymerase II transcription subunit 26 isoform X1

1.9e-156

100

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
        KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV

A0A6J1CN36 uncharacterized protein LOC111013003

2.1e-128

83.22

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPFRLDIDELI E+AE G+TSF DMK VW GRKFTYIFEAAPS NLAFFMQS++AQSI HM   ASL  RLGG YCLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELVVDAKE NVKV S V KRMLEKNMFLFGSVDMNES+ALETVNQLTELQNAR+QVAYNKLF+DTPIE+YIHMDLGMEVG N+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEA--DQQLLEDHTDVNFDKELERMLTDV
        KKLALYEAS I+DVQDIKHI+ED++LIGDTVE+IAE+WNVQRGVFYEQTGLD+QL+PVEA  + QLL  H D NFDKELERMLTD+
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEA--DQQLLEDHTDVNFDKELERMLTDV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G53270.1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

2.8e-80

52.43

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        EL K ++LVV+AK+  V++ + V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVNFDKELERMLT
        KK A+  A +I+++ DIKHI+E+++L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE D+       D  FD EL+R+L+
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVNFDKELERMLT

AT3G53270.2 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

2.8e-80

52.43

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        EL K ++LVV+AK+  V++ + V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVNFDKELERMLT
        KK A+  A +I+++ DIKHI+E+++L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE D+       D  FD EL+R+L+
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVNFDKELERMLT

AT3G53270.3 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

2.8e-80

52.43

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        EL K ++LVV+AK+  V++ + V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVNFDKELERMLT
        KK A+  A +I+++ DIKHI+E+++L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE D+       D  FD EL+R+L+
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVNFDKELERMLT

AT3G53270.4 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

2.8e-80

52.43

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        EL K ++LVV+AK+  V++ + V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVNFDKELERMLT
        KK A+  A +I+++ DIKHI+E+++L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE D+       D  FD EL+R+L+
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVNFDKELERMLT

AT3G53270.5 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

2.8e-80

52.43

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Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        EL K ++LVV+AK+  V++ + V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVNFDKELERMLT
        KK A+  A +I+++ DIKHI+E+++L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE D+       D  FD EL+R+L+
Subjt:  KKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVNFDKELERMLT

Sequences

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CDS sequence

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ATGGATCTCTCTCCATTCAGGCTTGATATTGATGAGTTGATCAATGAATTTGCAGAGTGTGGATTCACATCTTTTGGTGATATGAAGAAAGTATGGATTGGAAGAAAATT
CACTTACATATTTGAGGCTGCTCCTTCTACCAACTTGGCCTTCTTTATGCAATCAATCTTTGCCCAATCAATCAGTCACATGCGTAGTGCTGCTTCTTTGCCACACAGAT
TAGGTGGCCTTTATTGCCTTTACTGCCTTTATGAGACACAGCCCTTTAGACCCCCTTACAAAATCTACCTGTCTATTGGAGAGTTGAAGAAACTGAAGGAACTTGTTGTT
GATGCAAAAGAAAATAATGTAAAAGTGGTATCTTTTGTGGTGAAAAGAATGTTAGAAAAGAACATGTTTCTCTTTGGATCTGTGGACATGAATGAGAGTGCTGCTTTGGA
AACGGTGAATCAACTAACAGAATTGCAAAATGCTCGCGTTCAAGTAGCCTATAATAAGTTGTTTAATGATACTCCAATTGAAAATTATATCCATATGGACTTGGGGATGG
AAGTTGGTTCAAATTTATTAACAAAGATGTCAACAGATTATTCAGAGGCCAAGAAACTTGCATTATATGAAGCAAGTAAGATAGTGGATGTTCAGGACATAAAGCACATA
GCAGAAGATGAGAAATTGATTGGAGATACGGTTGAAAAGATTGCTGAGGACTGGAATGTTCAGAGAGGAGTTTTTTATGAACAAACCGGACTCGACCAACAGCTTATTCC
AGTCGAGGCAGATCAGCAGTTACTTGAAGATCACACCGATGTAAATTTTGATAAGGAACTCGAAAGAATGCTAACTGATGTTTAA

mRNA sequence

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Protein sequence

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MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIGELKKLKELVV
DAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEAKKLALYEASKIVDVQDIKHI
AEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVNFDKELERMLTDV

IVF0019454 (gene) of Melon (IVF77) v1 genome