CuGenDBv2

Gene ID	IVF0019462
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	HNH domain-containing protein
Genome location	chr02:21597938..21600554
RNA-Seq Expression	IVF0019462
Synteny	IVF0019462
Gene Ontology terms	GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0004519 - endonuclease activity (molecular function)
InterPro domains	IPR002711 - HNH endonuclease IPR003615 - HNH nuclease

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004138170.1 uncharacterized protein LOC101222461 [Cucumis sativus]

5.26e-125

90.5

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Query:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGDLKFSP+DS              QQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_008453210.1 PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo]

5.71e-129

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Query:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS              QQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_022972967.1 uncharacterized protein LOC111471489 [Cucurbita maxima]

4.26e-115

84.5

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Query:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT   T  ES R+GS+ S LSPS SLLDRDLVT E+NLLGDLK SP+DS              QQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_023529236.1 uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]

4.26e-115

84.5

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Query:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT   T  ES R+GSH S LSPS SLLDRDLVT E+NLLGDLK SP+ S              QQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_038880609.1 uncharacterized protein LOC120072255 [Benincasa hispida]

6.59e-119

86.5

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Query:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPND--------------SQQCWDKAEKIKGRDPDRW
        MRR+KESKKKTR SSPLRDRTG PTSLES RYGS+PSSLSPSASLLDRDL+TGE++LLGDLK SP+D               QQCWDKAEKIKGRDP RW
Subjt:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPND--------------SQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LUI5 HNH domain-containing protein

1.2e-95

90.5

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Query:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGDLKFSP+DS              QQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A1S3BWU4 uncharacterized protein LOC103493997

1.2e-98

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Query:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS              QQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A5A7US43 HNH endonuclease

1.2e-98

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Query:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS              QQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A6J1EZE0 uncharacterized protein LOC111440950

1.2e-87

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Query:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT      ES R+GSH S LSPS SLLDRDLVT E+NLLGDLK SP+DS              QQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQD GGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A6J1I688 uncharacterized protein LOC111471489

4.1e-88

84.5

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Query:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT   T  ES R+GS+ S LSPS SLLDRDLVT E+NLLGDLK SP+DS              QQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDS--------------QQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G18680.1 HNH endonuclease domain-containing protein

1.3e-25

40.16

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Query:  FSPNDSQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRD
        F      +CW  A+ + GR P+RWR+D  GN V ++   C GCLC +YDHI+PYSKGG+S  ENCQ+LQ  VNR K  +  +    L   S   + + ++
Subjt:  FSPNDSQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRD

Query:  MDLLELSAYGNVHRGQDSGGCR
        +D++E++ YG+V R      C+
Subjt:  MDLLELSAYGNVHRGQDSGGCR

AT3G47490.1 HNH endonuclease

2.6e-58

62.83

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Query:  SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRD---LVTGESNLLGDLKFSPND-----SQQCWDKAEKIKGRDPDRWRRDALGNTV
        S  S  KTRP       +G+P        G     +  SA+LLDR+   L  G     GD    P        QQCW+KAEKIKGRDP+RWRRD LGN V
Subjt:  SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRD---LVTGESNLLGDLKFSPND-----SQQCWDKAEKIKGRDPDRWRRDALGNTV

Query:  FRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        FRKLVGCPGCLCHDYDHI+PYSKGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+GRDMDL+EL+AYGNV R   S GCRIQ
Subjt:  FRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

AT3G47490.2 HNH endonuclease

8.4e-25

52.85

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Query:  SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRD---LVTGESNLLGDLKFSPND-----SQQCWDKAEKIKGRDPDRWRRDALGNTV
        S  S  KTRP       +G+P        G     +  SA+LLDR+   L  G     GD    P        QQCW+KAEKIKGRDP+RWRRD LGN V
Subjt:  SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRD---LVTGESNLLGDLKFSPND-----SQQCWDKAEKIKGRDPDRWRRDALGNTV

Query:  FRKLVGCPGCLCHDYDHILPYSK
        FRKLVGCPGCLCHDYDHI+PYSK
Subjt:  FRKLVGCPGCLCHDYDHILPYSK

AT3G47490.3 HNH endonuclease

1.0e-54

56.87

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Query:  SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRD---LVTGESNLLGDLKFSPND-----SQQCWDKAEKIKGRDPDRWRRDALGNTV
        S  S  KTRP       +G+P        G     +  SA+LLDR+   L  G     GD    P        QQCW+KAEKIKGRDP+RWRRD LGN V
Subjt:  SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRD---LVTGESNLLGDLKFSPND-----SQQCWDKAEKIKGRDPDRWRRDALGNTV

Query:  FRKLVGCPGCLCHDYDHILPYS--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVH
        FRKLVGCPGCLCHDYDHI+PYS                    KGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+GRDMDL+EL+AYGNV 
Subjt:  FRKLVGCPGCLCHDYDHILPYS--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVH

Query:  RGQDSGGCRIQ
        R   S GCRIQ
Subjt:  RGQDSGGCRIQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGGCGAAGCAAGGAATCGAAGAAGAAAACTCGCCCCTCGTCACCGCTCAGGGACCGAACTGGTGCTCCAACAAGTCTCGAATCGACGCGTTATGGGTCTCACCCATC
AAGCCTCAGCCCCTCTGCATCCCTTCTGGACCGGGACCTCGTCACCGGCGAATCCAATCTCCTCGGAGACCTAAAATTCTCTCCCAATGACTCACAGCAATGTTGGGATA
AGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGCTGGCGACGGGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTAT
GATCACATTTTGCCTTACTCTAAGGGAGGAAAGAGCACACTAGAAAATTGTCAGGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACAGAAATTTCGAGGGC
AGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTA
GAATTCAATGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDSQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDY
DHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

IVF0019462 (gene) of Melon (IVF77) v1 genome