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IVF0019491 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019491
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr01:18698053..18698328
RNA-Seq ExpressionIVF0019491
SyntenyIVF0019491
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051113.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.92e-51100Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.32e-2896.88Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNN
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLE+N+
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNN
TYK02703.1 gag-pol polyprotein [Cucumis melo var. makuwa]7.24e-52100Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
TYK08901.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]6.39e-3196.88Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNN
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLE+N+
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNN
TYK18867.1 hypothetical protein E5676_scaffold204G00690 [Cucumis melo var. makuwa]2.15e-3074.73Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVV-ILHHVELAHYGS
        METSSGQHSETSPSLSP+PAPSTNNATGTVSSS+PPLPDKK+ RA+KKTTST WDHFTKLEKN+         K     IL HVELAHY S
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVV-ILHHVELAHYGS
TrEMBL top hitse value%identityAlignment
A0A5A7U5G1 Gag-pol polyprotein1.0e-39100Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.3e-2396.88Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNN
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLE+N+
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNN
A0A5D3BSP6 Gag-pol polyprotein1.0e-39100Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST
A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.3e-2396.88Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNN
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLE+N+
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNN
A0A5D3CAM1 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.3e-2396.88Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNN
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLE+N+
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACAAGTAGTGGACAACATAGTGAAACTAGCCCCAGTCTTAGTCCTAGTCCTGCCCCTTCCACTAATAACGCAACGGGAACTGTGAGTTCAAGTAAACCACCACT
ACCCGATAAGAAGAAAGTTAGAGCCACTAAGAAAACAACTTCCACGGTATGGGATCACTTCACAAAGTTGGAAAAGAATAATTTAGGTGCACATGCAATTATTGTGTTAA
AGAGTATTGTTGTGATACTACATCATGTGGAACTAGCACATTATGGAAGCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACAAGTAGTGGACAACATAGTGAAACTAGCCCCAGTCTTAGTCCTAGTCCTGCCCCTTCCACTAATAACGCAACGGGAACTGTGAGTTCAAGTAAACCACCACT
ACCCGATAAGAAGAAAGTTAGAGCCACTAAGAAAACAACTTCCACGGTATGGGATCACTTCACAAAGTTGGAAAAGAATAATTTAGGTGCACATGCAATTATTGTGTTAA
AGAGTATTGTTGTGATACTACATCATGTGGAACTAGCACATTATGGAAGCACCTAA
Protein sequenceShow/hide protein sequence
METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEKNNLGAHAIIVLKSIVVILHHVELAHYGST