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IVF0019508 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019508
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr08:16053464..16053892
RNA-Seq ExpressionIVF0019508
SyntenyIVF0019508
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055470.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.87e-8192.96Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQ+MLAKAKQGPEAEF+LR DGAIVKQGRLC+ NISELKGAILEEAHNSAY MHP STKMYRTLK TY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY

Query:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
        WWPGMKREIAEYVDRCLICQQVKPVRQRP GLLNPLPV EWK
Subjt:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK

KAA0066738.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.83e-7992.25Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
        MTAESSGSLLAQFQVRSSLVAEIVGRQ ED NLQ+MLAKAKQGP+AEFELR D AIVKQGRLC+LNISELKGAILEEAHNSAY MHP STKMYRTLK TY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY

Query:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
        WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPV EWK
Subjt:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK

TYK00847.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.10e-91100Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY

Query:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
        WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
Subjt:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK

TYK08952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.09e-8092.96Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQ+MLAKAKQGPEAEF+LR DGAIVKQGRLC+ NISELKGAILEEAHNSAY MHP STKMYRTLK TY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY

Query:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
        WWPGMKREIAEYVDRCLICQQVKPVRQRP GLLNPLPV EWK
Subjt:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK

TYK11723.1 reverse transcriptase [Cucumis melo var. makuwa]9.81e-8088.03Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
        MTAESSGSLLAQFQVRSSLVAE VGRQ EDSNLQ+MLAKAKQGPEAEFELR + AIVKQGRLC+ NIS+LKGAILEE HN AY MHP STKMYRTLKNTY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY

Query:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
        WWPGMKREIAEYVDRCLICQQVK VRQ PGGLLNPLP+ EWK
Subjt:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK

TrEMBL top hitse value%identityAlignment
A0A5A7TKT0 Reverse transcriptase5.8e-6689.44Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
        M AESSGSLLAQFQ+RSSLVAEIVGRQPEDSNLQ+MLAKAKQGPE EFELR DGAIVKQGRLC+ NISELKG ILEEAHNSAY MHP STKMYRTLK TY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY

Query:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
        WWPGMKR+IAEYVDRCLICQQVKP+RQRPGGLLN LPV EWK
Subjt:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK

A0A5A7UJV1 DNA/RNA polymerases superfamily protein2.1e-6892.96Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQ+MLAKAKQGPEAEF+LR DGAIVKQGRLC+ NISELKGAILEEAHNSAY MHP STKMYRTLK TY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY

Query:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
        WWPGMKREIAEYVDRCLICQQVKPVRQRP GLLNPLPV EWK
Subjt:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK

A0A5D3BNL5 DNA/RNA polymerases superfamily protein1.5e-74100Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY

Query:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
        WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
Subjt:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK

A0A5D3CCC7 DNA/RNA polymerases superfamily protein2.1e-6892.96Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQ+MLAKAKQGPEAEF+LR DGAIVKQGRLC+ NISELKGAILEEAHNSAY MHP STKMYRTLK TY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY

Query:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
        WWPGMKREIAEYVDRCLICQQVKPVRQRP GLLNPLPV EWK
Subjt:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK

A0A5D3DVW9 DNA/RNA polymerases superfamily protein2.3e-6792.25Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY
        MTAESSGSLLAQFQVRSSLVAEIVGRQ ED NLQ+MLAKAKQGP+AEFELR D AIVKQGRLC+LNISELKGAILEEAHNSAY MHP STKMYRTLK TY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTY

Query:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK
        WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPV EWK
Subjt:  WWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.6e-0722.63Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWP
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ + N ++L   I+++ H     +HP    +   +   + W 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWP

Query:  GMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLE
        G++++I EYV  C  CQ  K    +P G L P+P  E
Subjt:  GMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLE

P0CT35 Transposon Tf2-2 polyprotein2.6e-0722.63Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWP
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ + N ++L   I+++ H     +HP    +   +   + W 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWP

Query:  GMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLE
        G++++I EYV  C  CQ  K    +P G L P+P  E
Subjt:  GMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLE

P0CT36 Transposon Tf2-3 polyprotein2.6e-0722.63Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWP
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ + N ++L   I+++ H     +HP    +   +   + W 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWP

Query:  GMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLE
        G++++I EYV  C  CQ  K    +P G L P+P  E
Subjt:  GMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLE

P0CT41 Transposon Tf2-12 polyprotein2.6e-0722.63Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWP
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ + N ++L   I+++ H     +HP    +   +   + W 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWP

Query:  GMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLE
        G++++I EYV  C  CQ  K    +P G L P+P  E
Subjt:  GMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLE

Q9UR07 Transposon Tf2-11 polyprotein2.6e-0722.63Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWP
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ + N ++L   I+++ H     +HP    +   +   + W 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWP

Query:  GMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLE
        G++++I EYV  C  CQ  K    +P G L P+P  E
Subjt:  GMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVLE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCAGAAAGCTCAGGGAGTCTTTTAGCTCAATTTCAGGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAACCAGAGGATAGTAATTTGCAGAGGATGCT
TGCAAAGGCCAAACAAGGCCCAGAGGCAGAATTTGAGTTGAGAATGGACGGAGCCATAGTTAAGCAGGGAAGACTATGCATTCTGAATATTAGTGAGCTTAAGGGTGCTA
TACTAGAAGAAGCTCACAATTCAGCTTATACTATGCATCCAGAAAGCACCAAGATGTATAGAACTCTGAAGAATACTTATTGGTGGCCTGGTATGAAGCGAGAGATAGCT
GAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACCAGTGAGGCAGAGGCCAGGAGGACTCCTTAATCCCCTGCCAGTGCTAGAGTGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGCAGAAAGCTCAGGGAGTCTTTTAGCTCAATTTCAGGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAACCAGAGGATAGTAATTTGCAGAGGATGCT
TGCAAAGGCCAAACAAGGCCCAGAGGCAGAATTTGAGTTGAGAATGGACGGAGCCATAGTTAAGCAGGGAAGACTATGCATTCTGAATATTAGTGAGCTTAAGGGTGCTA
TACTAGAAGAAGCTCACAATTCAGCTTATACTATGCATCCAGAAAGCACCAAGATGTATAGAACTCTGAAGAATACTTATTGGTGGCCTGGTATGAAGCGAGAGATAGCT
GAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACCAGTGAGGCAGAGGCCAGGAGGACTCCTTAATCCCCTGCCAGTGCTAGAGTGGAAGTGA
Protein sequenceShow/hide protein sequence
MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQRMLAKAKQGPEAEFELRMDGAIVKQGRLCILNISELKGAILEEAHNSAYTMHPESTKMYRTLKNTYWWPGMKREIA
EYVDRCLICQQVKPVRQRPGGLLNPLPVLEWK