; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019528 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019528
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationchr11:5297618..5299979
RNA-Seq ExpressionIVF0019528
SyntenyIVF0019528
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042981.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa]1.98e-163100Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
        NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
Subjt:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG

Query:  SALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        SALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  SALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

XP_004148092.1 binding partner of ACD11 1 [Cucumis sativus]2.57e-15796.84Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKD KGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+D
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTT-TTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
        NTTSTT +TAGSA+QK EDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
Subjt:  NTTSTT-TTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA

Query:  GSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        GSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  GSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

XP_016902374.1 PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]2.21e-146100Show/hide
Query:  FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSM
        FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSM
Subjt:  FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSM

Query:  LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRV
        LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRV
Subjt:  LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRV

Query:  AKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        AKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  AKAAVDVSQKTKEKVLAEEDQGKHVGNSS

XP_038900617.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]4.92e-15093.25Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MA RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMR D ERSQLAFVTFKDPKGAETSILLSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA D
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
        NT S T+TAGSA+QK EDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
Subjt:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG

Query:  SALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        SA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL E DQGKHVGNSS
Subjt:  SALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

XP_038900618.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]5.34e-14993.57Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT
        RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMR D ERSQLAFVTFKDPKGAETSILLSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA DNT 
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT

Query:  STTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAL
        S T+TAGSA+QK EDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA+
Subjt:  STTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAL

Query:  MANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL E DQGKHVGNSS
Subjt:  MANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein8.6e-12196.84Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKD KGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+D
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTT-TTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
        NTTSTT +TAGSA+QK EDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
Subjt:  NTTSTT-TTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA

Query:  GSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        GSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  GSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

A0A1S3CAU8 binding partner of ACD11 1-like isoform X29.2e-107100Show/hide
Query:  MRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDA
        MRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDA
Subjt:  MRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDA

Query:  LNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKT
        LNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKT
Subjt:  LNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKT

Query:  KEKVLAEEDQGKHVGNSS
        KEKVLAEEDQGKHVGNSS
Subjt:  KEKVLAEEDQGKHVGNSS

A0A1S4E2B3 binding partner of ACD11 1-like isoform X15.0e-113100Show/hide
Query:  FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSM
        FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSM
Subjt:  FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSM

Query:  LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRV
        LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRV
Subjt:  LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRV

Query:  AKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        AKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  AKAAVDVSQKTKEKVLAEEDQGKHVGNSS

A0A5A7TN24 Binding partner of ACD11 1-like isoform X12.0e-125100Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
        NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
Subjt:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG

Query:  SALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        SALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  SALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

A0A6J1JGG3 binding partner of ACD11 1-like isoform X23.7e-10083.46Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MA RTVRVTNVSL ATEK+LR+FFSFSGEIEFVEMR DNE+ Q+AFVTFKDPKGAETSILLSGATIVDQP+SI SAPDYNLPAV AS P A   S PA +
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  N-------TTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTK
        N       T  TT T GSA+QK EDVVSSMLAKGF LGKDALN+AKSFDERHQLT TASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTK
Subjt:  N-------TTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTK

Query:  AAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKH
        AAV+NAGSA+M NRYV TGASWVSQTFQRVAKAAVDVSQKTKEK+LAE+ QGKH
Subjt:  AAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKH

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.8e-0628.12Show/hide
Query:  VRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTST
        V VTN+S   TEK + DFFSF G++  +      E +Q A + F+ P   +T++LL  A +    + I+S         D  A            +TT  
Subjt:  VRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTST

Query:  TTTAGSAIQKTED-----VVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMDEKFQVSEK
            G    + ED     ++S +L++G+ L    L K+   D+ + ++S     + S      LS   SV     V EK  E+D KF +S+K
Subjt:  TTTAGSAIQKTED-----VVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMDEKFQVSEK

Q9LFD5 Binding partner of ACD11 13.1e-5954.47Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT
        R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y               S PA  +  
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT

Query:  STTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV
        + ++ A S +QK EDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        V
Subjt:  STTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV

Query:  SNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE
        S+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE+
Subjt:  SNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.8e-6958.59Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        M   TV+V+NVSL AT++DL++FFSFSG+I ++E +++ ER++LA+VTFKD +GAET++LLSGATIVD  V +S APDY L      +P A+    P   
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-----
        N   +     S ++K EDVVSSMLAKGF LGKDA+ KAKS DE+HQLTSTAS+KVAS D+KIG ++KI+ GT VV EKVRE+D+K+QVSEKTK+A     
Subjt:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-----

Query:  --VSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEEDQGKHV
          VSNAGSA+M NRYVLTGA+WV+  F +VAKAA +V QK KEKV +AEE+  + V
Subjt:  --VSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEEDQGKHV

AT5G16840.1 binding partner of acd11 12.2e-6054.47Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT
        R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y               S PA  +  
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT

Query:  STTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV
        + ++ A S +QK EDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        V
Subjt:  STTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV

Query:  SNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE
        S+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE+
Subjt:  SNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE

AT5G16840.2 binding partner of acd11 11.2e-6154.47Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT
        R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y               S PA  +  
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT

Query:  STTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV
        + ++ A S +QK EDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        V
Subjt:  STTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV

Query:  SNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE
        S+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE+
Subjt:  SNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE

AT5G16840.3 binding partner of acd11 12.6e-6154.62Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MA R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y               S PA  
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA------
        +  + ++ A S +QK EDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+      
Subjt:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA------

Query:  -AVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE
          VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE+
Subjt:  -AVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.3e-6857.54Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        M+  TV+V+NVSL ATE+DL++FFSFSG+I ++E +++N+ S+LA+VTFKD +GAET++LL+G+TIVD  V+++ +PDY LP  DA A +    S    +
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-----
         ++S T    S  +K EDVVS M++KGF LGKDA+ KAKS DE+HQLTSTAS++V S D++IG +EKI+ GTTVV+EKV+E+D+KFQV+EKTK+A     
Subjt:  NTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-----

Query:  --VSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEEDQ
          VSNAGSA+M NRYVLTGA+WV+  F RV+KAA +V QK KEKV LAEE++
Subjt:  --VSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEEDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGAGGACGGTGAGAGTTACCAATGTCTCCTTAAGCGCGACAGAGAAAGATTTGAGAGACTTTTTTTCCTTTTCCGGTGAAATTGAATTTGTCGAAATGAGAAA
TGACAATGAGCGATCTCAACTTGCATTTGTTACCTTTAAGGATCCAAAAGGGGCAGAGACGTCGATTCTACTCTCGGGAGCTACAATTGTCGATCAGCCAGTAAGCATTT
CTTCGGCTCCAGATTACAACCTTCCTGCAGTTGATGCCAGTGCCCCTGTAGCTGTACCCGTGTCTACTCCTGCTATAGACAACACAACCTCTACTACTACTACTGCTGGA
TCTGCAATCCAGAAGACAGAGGATGTTGTCAGCAGCATGCTAGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCGAAGTCTTTCGACGAAAGGCACCAATT
GACTTCGACAGCCTCATCCAAAGTTGCTTCTCTGGACCAAAAAATCGGCCTTAGTGAGAAAATTAGTGTTGGCACAACCGTGGTGAATGAGAAAGTGAGGGAAATGGATG
AGAAGTTTCAAGTGTCTGAGAAGACTAAGGCAGCCGTGAGCAATGCTGGATCAGCTTTAATGGCTAACCGCTACGTCTTAACCGGGGCTTCCTGGGTTAGCCAGACATTT
CAACGAGTCGCAAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGAGGATCAAGGGAAACATGTGGGAAATTCCTCTTAA
mRNA sequenceShow/hide mRNA sequence
AAGGAGTCAGTTTCGTTATTTTGCCATATGTATTACTACGAACCTAAACAACCGCCAAGCCACAACGCAACTCTCAAGGCGTTCTTCCTTCTTATTTTCTCCTTTCTCTC
TCTTAAAATTTGAATTGGCAAATCTCTCAGGTGAATCAAACAGAAGAATCATGGCGACGAGGACGGTGAGAGTTACCAATGTCTCCTTAAGCGCGACAGAGAAAGATTTG
AGAGACTTTTTTTCCTTTTCCGGTGAAATTGAATTTGTCGAAATGAGAAATGACAATGAGCGATCTCAACTTGCATTTGTTACCTTTAAGGATCCAAAAGGGGCAGAGAC
GTCGATTCTACTCTCGGGAGCTACAATTGTCGATCAGCCAGTAAGCATTTCTTCGGCTCCAGATTACAACCTTCCTGCAGTTGATGCCAGTGCCCCTGTAGCTGTACCCG
TGTCTACTCCTGCTATAGACAACACAACCTCTACTACTACTACTGCTGGATCTGCAATCCAGAAGACAGAGGATGTTGTCAGCAGCATGCTAGCCAAAGGCTTCACTTTG
GGCAAAGATGCCCTTAATAAGGCGAAGTCTTTCGACGAAAGGCACCAATTGACTTCGACAGCCTCATCCAAAGTTGCTTCTCTGGACCAAAAAATCGGCCTTAGTGAGAA
AATTAGTGTTGGCACAACCGTGGTGAATGAGAAAGTGAGGGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACTAAGGCAGCCGTGAGCAATGCTGGATCAGCTTTAA
TGGCTAACCGCTACGTCTTAACCGGGGCTTCCTGGGTTAGCCAGACATTTCAACGAGTCGCAAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCT
GAGGAGGATCAAGGGAAACATGTGGGAAATTCCTCTTAAACTCATTCCAAGAATTGCTGCGCTCCAATATATCAAAATCCATATATATTTGGCCAAAACAATGTGAGGAC
CAATTCTCTTAGCTTCCTATTTTTGATCTCAGTTTGATGTAATTTTAATGCTTTATTTTAGTTTTAGTATTAGGATTATACATACATATACGCTAAATTACATGCTTATG
TTGTAATTCAATTGTAAGAAAAGCATATCTATATTCATATATATATATATATATATGCTTTGTGATACCGGCTTTCTTTGTTTAGATACTTGGCTTCTACTTGTGCATTT
TGGTGTGTTGATATATTTTTCTACAACCATTTCTATTTGTGAG
Protein sequenceShow/hide protein sequence
MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAG
SAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTF
QRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS