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IVF0019549 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019549
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr08:31241041..31241622
RNA-Seq ExpressionIVF0019549
SyntenyIVF0019549
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031873.1 uncharacterized protein E6C27_scaffold712G00160 [Cucumis melo var. makuwa]6.43e-133100Show/hide
Query:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG
        MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG
Subjt:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG

Query:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
        GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
Subjt:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR

KAA0065524.1 gag/pol protein [Cucumis melo var. makuwa]8.38e-6261.14Show/hide
Query:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG
        MD NERDDVPLA+LL+KGL S+V P+ +  P+TS HSHESSS  +IF+PTPSHS   N   GQ G    V+SS +VD SV D   VPD +P+ ++TEN+G
Subjt:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG

Query:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
         N D P +++   +DAHVE T+TCA+D +E DVN E Q ETQQSPG SRPKGKKFQQN++NI+ K  R+KIP NIPS PIDGI FHL+ESVQR
Subjt:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR

TYK04133.1 uncharacterized protein E5676_scaffold2119G00760 [Cucumis melo var. makuwa]1.48e-6073.72Show/hide
Query:  KNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLGGNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQ
        +N E GQ GC  PVRS  +VDP VDDQ SVPD +PVGEST+NLGGNF  P NQN  DVDA V+PTDT A DNVE D+NVEPQ ETQQSPGESRPKGKKF+
Subjt:  KNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLGGNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQ

Query:  QNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
        QN+QNI  KA R+KIPPNIPS PIDGI FHL++SVQR
Subjt:  QNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR

TYK24860.1 uncharacterized protein E5676_scaffold184G001290 [Cucumis melo var. makuwa]6.86e-7367.19Show/hide
Query:  DLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLGG
        D NERDDVPLA+ L+ GLLS+VEPSGTAA VTSVHSHESSSSDEIFIPTP H    NVEVGQ GC  PVRSS RVDP VDDQHSVPD DPVGES ENLGG
Subjt:  DLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLGG

Query:  NFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
        NFD+ ANQNP DVDAH+EPTDT A                  +  +S+ KGKKFQQ ++NI+ K GR+KIP NI   PIDGILFHL+ES+ +
Subjt:  NFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR

TYK29294.1 gag/pol protein [Cucumis melo var. makuwa]2.98e-6260.62Show/hide
Query:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG
        MD NERDDVPLA+LL+KGL S+V P+ +  P+TS HSHESSS  +IF+PTPSHS   N   GQ G    V+SS +VD S+ D   VPD +P+ ++TEN+G
Subjt:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG

Query:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
         N D P +++   +DAHVE T+TCA+D +E DVN E Q ETQQSPG SRPKGKKFQQN++NI+ K  R+KIP NIPS PIDGI FHL+ESVQR
Subjt:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR

TrEMBL top hitse value%identityAlignment
A0A5A7TWT7 Uncharacterized protein3.7e-4773.72Show/hide
Query:  KNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLGGNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQ
        +N E GQ GC  PVRS  +VDP VDDQ SVPD +PVGEST+NLGGNF  P NQN  DVDA V+PTDT A DNVE D+NVEPQ ETQQSPGESRPKGKKF+
Subjt:  KNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLGGNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQ

Query:  QNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
        QN+QNI  KA R+KIPPNIPS PIDGI FHL++SVQR
Subjt:  QNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR

A0A5A7VE22 Gag/pol protein1.0e-5261.14Show/hide
Query:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG
        MD NERDDVPLA+LL+KGL S+V P+ +  P+TS HSHESSS  +IF+PTPSHS   N   GQ G    V+SS +VD SV D   VPD +P+ ++TEN+G
Subjt:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG

Query:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
         N D P +++   +DAHVE T+TCA+D +E DVN E Q ETQQSPG SRPKGKKFQQN++NI+ K  R+KIP NIPS PIDGI FHL+ESVQR
Subjt:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR

A0A5D3CE79 Uncharacterized protein2.3e-102100Show/hide
Query:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG
        MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG
Subjt:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG

Query:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
        GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
Subjt:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR

A0A5D3DNK5 Uncharacterized protein7.1e-5967.89Show/hide
Query:  DLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLGG
        D NERDDVPLA+ L+ GLLS+VEPSGTAA VTSVHSHESSSSDEIFIPTP H    NVEVGQ GC  PVRSS RVDP VDDQHSVPD DPVGES ENLGG
Subjt:  DLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLGG

Query:  NFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESV
        NFD+ ANQNP DVDAH+EPTDT A                  +  +S+ KGKKFQQ ++NI+ K GR+KIP NI   PIDGILFHL+ES+
Subjt:  NFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESV

A0A5D3E0G7 Gag/pol protein1.0e-5260.62Show/hide
Query:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG
        MD NERDDVPLA+LL+KGL S+V P+ +  P+TS HSHESSS  +IF+PTPSHS   N   GQ G    V+SS +VD S+ D   VPD +P+ ++TEN+G
Subjt:  MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLG

Query:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR
         N D P +++   +DAHVE T+TCA+D +E DVN E Q ETQQSPG SRPKGKKFQQN++NI+ K  R+KIP NIPS PIDGI FHL+ESVQR
Subjt:  GNFDNPANQNPADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGAACGAGCGTGATGATGTTCCCCTAGCCAAATTGTTGAGGAAGGGGTTACTCTCTAGTGTTGAACCTTCTGGAACTGCTGCTCCTGTCACTTCAGTTCATTC
TCACGAAAGCTCATCCTCTGATGAAATTTTTATTCCAACGCCTAGTCATTCTCTTGCAAAAAATGTAGAAGTTGGTCAATTTGGGTGCTTTCTACCAGTTAGGTCTTCGT
TTCGGGTCGATCCTTCAGTTGATGATCAGCATTCAGTTCCTGACCCTGATCCTGTTGGTGAATCTACTGAGAATCTGGGTGGAAATTTTGATAATCCTGCAAATCAGAAT
CCTGCTGATGTTGATGCACATGTTGAACCTACCGATACATGTGCATCCGACAATGTTGAATCAGATGTAAATGTTGAACCACAATCAGAGACTCAACAATCTCCTGGTGA
ATCTAGGCCAAAGGGGAAGAAGTTTCAGCAAAACCAGCAGAACATCTCTATAAAGGCTGGTAGAAGGAAGATACCTCCAAATATCCCTTCTTTTCCCATTGATGGAATTT
TGTTTCATCTTAAAGAGAGTGTCCAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGAACGAGCGTGATGATGTTCCCCTAGCCAAATTGTTGAGGAAGGGGTTACTCTCTAGTGTTGAACCTTCTGGAACTGCTGCTCCTGTCACTTCAGTTCATTC
TCACGAAAGCTCATCCTCTGATGAAATTTTTATTCCAACGCCTAGTCATTCTCTTGCAAAAAATGTAGAAGTTGGTCAATTTGGGTGCTTTCTACCAGTTAGGTCTTCGT
TTCGGGTCGATCCTTCAGTTGATGATCAGCATTCAGTTCCTGACCCTGATCCTGTTGGTGAATCTACTGAGAATCTGGGTGGAAATTTTGATAATCCTGCAAATCAGAAT
CCTGCTGATGTTGATGCACATGTTGAACCTACCGATACATGTGCATCCGACAATGTTGAATCAGATGTAAATGTTGAACCACAATCAGAGACTCAACAATCTCCTGGTGA
ATCTAGGCCAAAGGGGAAGAAGTTTCAGCAAAACCAGCAGAACATCTCTATAAAGGCTGGTAGAAGGAAGATACCTCCAAATATCCCTTCTTTTCCCATTGATGGAATTT
TGTTTCATCTTAAAGAGAGTGTCCAAAGATGA
Protein sequenceShow/hide protein sequence
MDLNERDDVPLAKLLRKGLLSSVEPSGTAAPVTSVHSHESSSSDEIFIPTPSHSLAKNVEVGQFGCFLPVRSSFRVDPSVDDQHSVPDPDPVGESTENLGGNFDNPANQN
PADVDAHVEPTDTCASDNVESDVNVEPQSETQQSPGESRPKGKKFQQNQQNISIKAGRRKIPPNIPSFPIDGILFHLKESVQR