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IVF0019552 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019552
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr02:6418517..6418978
RNA-Seq ExpressionIVF0019552
SyntenyIVF0019552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033955.1 envelope-like protein [Cucumis melo var. makuwa]6.29e-2551.85Show/hide
Query:  FKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS
        FK+TP + PYRL FE  Q+PS DP++ESL  DP+   VPE+   Q+ N  DMDSD++DDVSL H+LKH VF   +QP    P  S A  PSG   VSL +
Subjt:  FKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS

Query:  TSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP
        TS   Q D+ + N   HS  N SQG DNVDQ S P
Subjt:  TSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP

KAA0056035.1 uncharacterized protein E6C27_scaffold319G001900 [Cucumis melo var. makuwa]1.04e-6093.81Show/hide
Query:  VPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSSFQDDILSLNVAQHS
        VPSSDPSEESLHVDPVRSYVPEHVSHQ+SNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSS FQDDILSLNVAQHS
Subjt:  VPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSSFQDDILSLNVAQHS

Query:  SGNVSQGLDNVDQ
        SGNVSQ ++ +DQ
Subjt:  SGNVSQGLDNVDQ

KAA0056755.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]2.97e-3756.16Show/hide
Query:  MHGVQIRSRRFKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIP-GPSTANH
        MH V+IR  +FKTTPSRRPYRLP +  QV  SDP+++SL  DPV S VPE+V H +S+ SDMD +KRD+V L HILK GVF   +Q +  +P   S  + 
Subjt:  MHGVQIRSRRFKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIP-GPSTANH

Query:  PSGVPFVSLHSTSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP
        PSG  FVSLH TSSS  +DI + N   HSS N+SQ  DNVDQ S P
Subjt:  PSGVPFVSLHSTSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP

TYK02589.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.51e-2551.85Show/hide
Query:  FKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS
        FK+TP + PYRL FE  Q+PS DP++ESL  DP+   VPE+   Q+ N  DMDSD++DDVSL H+LKH VF   +QP    P  S A  PSG   VSL +
Subjt:  FKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS

Query:  TSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP
        TS   Q D+ + N   HS  N SQG DNVDQ S P
Subjt:  TSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP

TYK27718.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.84e-6195.58Show/hide
Query:  VPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSSFQDDILSLNVAQHS
        VPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSSFQDDILSLNVAQHS
Subjt:  VPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSSFQDDILSLNVAQHS

Query:  SGNVSQGLDNVDQ
        SGNVSQ ++ +DQ
Subjt:  SGNVSQGLDNVDQ

TrEMBL top hitse value%identityAlignment
A0A5A7SXP0 Envelope-like protein9.4e-2251.85Show/hide
Query:  FKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS
        FK+TP + PYRL FE  Q+PS DP++ESL  DP+   VPE+   Q+ N  DMDSD++DDVSL H+LKH VF   +QP    P  S A  PSG   VSL +
Subjt:  FKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS

Query:  TSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP
        TS   Q D+ + N   HS  N SQG DNVDQ S P
Subjt:  TSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP

A0A5A7UQX6 Uncharacterized protein4.8e-5093.81Show/hide
Query:  VPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSSFQDDILSLNVAQHS
        VPSSDPSEESLHVDPVRSYVPEHVSHQ+SNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSS FQDDILSLNVAQHS
Subjt:  VPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSSFQDDILSLNVAQHS

Query:  SGNVSQGLDNVDQ
        SGNVSQ ++ +DQ
Subjt:  SGNVSQGLDNVDQ

A0A5A7UT97 Cell wall protein RBR3-like2.5e-3056.16Show/hide
Query:  MHGVQIRSRRFKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIP-GPSTANH
        MH V+IR  +FKTTPSRRPYRLP +  QV  SDP+++SL  DPV S VPE+V H +S+ SDMD +KRD+V L HILK GVF   +Q +  +P   S  + 
Subjt:  MHGVQIRSRRFKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIP-GPSTANH

Query:  PSGVPFVSLHSTSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP
        PSG  FVSLH TSSS  +DI + N   HSS N+SQ  DNVDQ S P
Subjt:  PSGVPFVSLHSTSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP

A0A5D3BWS9 Putative mitochondrial protein9.4e-2251.85Show/hide
Query:  FKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS
        FK+TP + PYRL FE  Q+PS DP++ESL  DP+   VPE+   Q+ N  DMDSD++DDVSL H+LKH VF   +QP    P  S A  PSG   VSL +
Subjt:  FKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS

Query:  TSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP
        TS   Q D+ + N   HS  N SQG DNVDQ S P
Subjt:  TSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTP

A0A5D3DW56 Putative mitochondrial protein3.3e-5195.58Show/hide
Query:  VPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSSFQDDILSLNVAQHS
        VPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSSFQDDILSLNVAQHS
Subjt:  VPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSSFQDDILSLNVAQHS

Query:  SGNVSQGLDNVDQ
        SGNVSQ ++ +DQ
Subjt:  SGNVSQGLDNVDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGGTGTTCAAATTAGGAGTCGTCGATTTAAAACTACTCCGTCCCGGCGTCCCTATCGTCTACCATTTGAAACAATTCAGGTACCGTCTTCTGATCCTTCTGAGGA
GTCTTTGCATGTTGATCCTGTTAGATCGTATGTTCCCGAGCATGTTAGTCATCAAAAGTCGAATTTCTCTGATATGGACTCAGATAAAAGGGATGATGTATCTCTAATTC
ATATTCTAAAGCATGGGGTTTTTAGTATAAAATCTCAACCAAATGTTAGTATTCCTGGTCCTTCTACTGCTAATCATCCTTCAGGTGTTCCTTTTGTTTCATTGCATTCC
ACGAGTAGCTCCTTTCAGGATGATATCCTCAGTTTGAATGTGGCACAACATTCAAGTGGAAATGTCTCTCAGGGTCTAGATAATGTTGATCAAGGGTCTACCCCTCACAT
GTTAAAAAGAATCAGTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATGGTGTTCAAATTAGGAGTCGTCGATTTAAAACTACTCCGTCCCGGCGTCCCTATCGTCTACCATTTGAAACAATTCAGGTACCGTCTTCTGATCCTTCTGAGGA
GTCTTTGCATGTTGATCCTGTTAGATCGTATGTTCCCGAGCATGTTAGTCATCAAAAGTCGAATTTCTCTGATATGGACTCAGATAAAAGGGATGATGTATCTCTAATTC
ATATTCTAAAGCATGGGGTTTTTAGTATAAAATCTCAACCAAATGTTAGTATTCCTGGTCCTTCTACTGCTAATCATCCTTCAGGTGTTCCTTTTGTTTCATTGCATTCC
ACGAGTAGCTCCTTTCAGGATGATATCCTCAGTTTGAATGTGGCACAACATTCAAGTGGAAATGTCTCTCAGGGTCTAGATAATGTTGATCAAGGGTCTACCCCTCACAT
GTTAAAAAGAATCAGTTCCTAA
Protein sequenceShow/hide protein sequence
MHGVQIRSRRFKTTPSRRPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQKSNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS
TSSSFQDDILSLNVAQHSSGNVSQGLDNVDQGSTPHMLKRISS