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IVF0019553 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019553
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNon-LTR retroelement reverse transcriptase-like protein
Genome locationchr03:17721846..17722121
RNA-Seq ExpressionIVF0019553
SyntenyIVF0019553
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.18e-2872.84Show/hide
Query:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSK
        MV+ASNEWRTLVRCQKPLEM LQ+RKRAELE+F   SQEN SENA + VFSSWGKK S +GFFPL RIG+ SFDL     K
Subjt:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSK

KAA0040927.1 hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa]3.11e-3065Show/hide
Query:  NASNEWRTLVRCQKPLEMPLQRRKRAELEEF---------------RCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHS
        NAS EWRTLVRCQKPL+M LQ+RK AELE+F               RCSS EN SENA DSVFSS G+K+  D FFPLLRIG+ SFDLRGS S++FNPHS
Subjt:  NASNEWRTLVRCQKPLEMPLQRRKRAELEEF---------------RCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHS

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]6.76e-3774.44Show/hide
Query:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHSWHA
        M NASNEW+TLVRCQKPLEM LQRRK+ EL++F CSSQEN S+NAPDS FSSWGKKRS  GFF LLRIG+ SFDL+GS  ++FN HSWH+
Subjt:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHSWHA

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]4.28e-2774.29Show/hide
Query:  LQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHSWHAP
        ++RR RA+L++FRCSSQEN SEN  DSVFSSW KK + DGFFPLLRIG+ SFDLRGS S++FNPHSWHAP
Subjt:  LQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHSWHAP

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]1.21e-3287.5Show/hide
Query:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMS
        M NASNEWR LVRCQKPLEM LQRRKR ELE+FRCSSQENVSENAPDS FSSWGKKRS DGFFPLLRIG+ S
Subjt:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMS

TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein1.1e-3074.44Show/hide
Query:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHSWHA
        M NASNEW+TLVRCQKPLEM LQRRK+ EL++F CSSQEN S+NAPDS FSSWGKKRS  GFF LLRIG+ SFDL+GS  ++FN HSWH+
Subjt:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHSWHA

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein5.6e-2274.29Show/hide
Query:  LQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHSWHAP
        ++RR RA+L++FRCSSQEN SEN  DSVFSSW KK + DGFFPLLRIG+ SFDLRGS S++FNPHSWHAP
Subjt:  LQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHSWHAP

A0A5D3CGX3 Uncharacterized protein2.7e-2465Show/hide
Query:  NASNEWRTLVRCQKPLEMPLQRRKRAELEE---------------FRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHS
        NAS EWRTLVRCQKPL+M LQ+RK AELE+               FRCSS EN SENA DSVFSS G+K+  D FFPLLRIG+ SFDLRGS S++FNPHS
Subjt:  NASNEWRTLVRCQKPLEMPLQRRKRAELEE---------------FRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHS

A0A5D3DFP2 Uncharacterized protein3.4e-2787.5Show/hide
Query:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMS
        M NASNEWR LVRCQKPLEM LQRRKR ELE+FRCSSQENVSENAPDS FSSWGKKRS DGFFPLLRIG+ S
Subjt:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMS

A0A5D3E5W4 NBS-LRR type resistance protein6.6e-2377.33Show/hide
Query:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDL
        MV+ASNEWRTLVRCQKPLEM LQ+RKRAELE+F   SQEN SENA + VFSSWGKK S +GFFPL RIG+ SFDL
Subjt:  MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCCCTTGCAGCGAAGGAAACGAGCTGAGCTCGAGGAATTCCGGTGCTCGTC
CCAAGAAAACGTGAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCTCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTAATATGTCTTTCG
ATCTTCGGGGCTCGTGCTCCAAGGAATTCAACCCACACTCCTGGCATGCTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCCCTTGCAGCGAAGGAAACGAGCTGAGCTCGAGGAATTCCGGTGCTCGTC
CCAAGAAAACGTGAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCTCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTAATATGTCTTTCG
ATCTTCGGGGCTCGTGCTCCAAGGAATTCAACCCACACTCCTGGCATGCTCCCTAA
Protein sequenceShow/hide protein sequence
MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHSWHAP