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IVF0019560 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019560
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr12:10851478..10851672
RNA-Seq ExpressionIVF0019560
SyntenyIVF0019560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]6.42e-1765Show/hide
Query:  NNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML
        NN NN   QN  EQ  AYLAHDLD+PI+SY SPN YD N  IAYL F EN  FEIK +ML
Subjt:  NNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML

KAA0060833.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]3.26e-1055.74Show/hide
Query:  QNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML
        QNN     NQ +    L YLAH+ DRPIRS  SPN Y  N  I Y  F EN RF+IKPVML
Subjt:  QNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]2.38e-1360.94Show/hide
Query:  MENQNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML
        M NQNN     NQ        YLA D DRPIRSY SPN YD N  IAY  FSEN RFEIK VML
Subjt:  MENQNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.27e-1256.45Show/hide
Query:  NNNNLINQNVAEQ---KLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML
        N NN++  N A Q    L  +AH+LD PIR+Y S N YD N  IAYL+F ENA FE+KPVML
Subjt:  NNNNLINQNVAEQ---KLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML

TYK08803.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]3.26e-1055.74Show/hide
Query:  QNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML
        QNN     NQ +    L YLAH+ DRPIRS  SPN Y  N  I Y  F EN RF+IKPVML
Subjt:  QNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML

TrEMBL top hitse value%identityAlignment
A0A5A7UDN8 Uncharacterized protein1.1e-1165Show/hide
Query:  NNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML
        NN NN   QN  EQ  AYLAHDLD+PI+SY SPN YD N  IAYL F EN  FEIK +ML
Subjt:  NNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.62.7e-0754.84Show/hide
Query:  NQNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML
        +QNN     NQ +    L YLAH+ DRPIRS  SPN Y  N  I Y  F EN RF+IKPVML
Subjt:  NQNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML

A0A5A7V2U7 Putative disease resistance RPP13-like protein 13.8e-0960.94Show/hide
Query:  MENQNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML
        M NQNN     NQ        YLA D DRPIRSY SPN YD N  IAY  FSEN RFEIK VML
Subjt:  MENQNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML

A0A5D3BVN1 Putative disease resistance RPP13-like protein 12.5e-0855.56Show/hide
Query:  NNNNNLINQNVAEQ---KLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML
        +N NN++  N A Q    L  +AH+LD PIR+Y S N YD N  IAYL+F ENA FE+KPVML
Subjt:  NNNNNLINQNVAEQ---KLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.62.7e-0754.84Show/hide
Query:  NQNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML
        +QNN     NQ +    L YLAH+ DRPIRS  SPN Y  N  I Y  F EN RF+IKPVML
Subjt:  NQNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATCAAAATAACAATAATAACCTCATTAATCAAAATGTCGCAGAGCAAAAACTTGCATATTTAGCCCATGATTTAGACCGCCCCATTAGATCATATGTATCACC
GAATTTTTATGACATAAATTCGAGTATTGCGTATCTCATGTTTAGCGAAAACGCAAGGTTTGAGATCAAACCAGTAATGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATCAAAATAACAATAATAACCTCATTAATCAAAATGTCGCAGAGCAAAAACTTGCATATTTAGCCCATGATTTAGACCGCCCCATTAGATCATATGTATCACC
GAATTTTTATGACATAAATTCGAGTATTGCGTATCTCATGTTTAGCGAAAACGCAAGGTTTGAGATCAAACCAGTAATGCTCTAA
Protein sequenceShow/hide protein sequence
MENQNNNNNLINQNVAEQKLAYLAHDLDRPIRSYVSPNFYDINSSIAYLMFSENARFEIKPVML