; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019610 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019610
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionsplicing factor 3A subunit 2
Genome locationchr04:30469675..30472681
RNA-Seq ExpressionIVF0019610
SyntenyIVF0019610
Gene Ontology termsGO:0000245 - spliceosomal complex assembly (biological process)
GO:0005686 - U2 snRNP (cellular component)
GO:0071004 - U2-type prespliceosome (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000690 - Matrin/U1-C, C2H2-type zinc finger
IPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR031781 - SF3A2 domain
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043971.1 splicing factor 3A subunit 2 [Cucumis melo var. makuwa]1.40e-22897.14Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKT---------VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKT---------VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP
        KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP

Query:  PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
        PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Subjt:  PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG

XP_004137848.1 splicing factor 3A subunit 2 [Cucumis sativus]2.56e-23199.12Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPP+G
Subjt:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
        NNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG

XP_008442733.1 PREDICTED: splicing factor 3A subunit 2 [Cucumis melo]1.55e-232100Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
        NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG

XP_023005145.1 splicing factor 3A subunit 2 [Cucurbita maxima]3.74e-22096.19Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKPQEANKP  VPAANGTVP       LPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
        NNTMANFTPGTQMNR PMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG

XP_038905938.1 splicing factor 3A subunit 2 [Benincasa hispida]1.22e-22998.83Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRP+PPPPQAP PPPPPPQQG PPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
        NNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG

TrEMBL top hitse value%identityAlignment
A0A0A0LEB1 Matrin-type domain-containing protein6.9e-18299.12Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPP+G
Subjt:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
        NNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG

A0A1S3B729 splicing factor 3A subunit 28.1e-183100Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
        NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG

A0A5A7TQW8 Splicing factor 3A subunit 26.5e-18097.14Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKT---------VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKT---------VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP
        KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP

Query:  PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
        PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Subjt:  PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG

A0A5D3DPC7 Splicing factor 3A subunit 28.1e-183100Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
        NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG

A0A6J1KWM2 splicing factor 3A subunit 22.6e-17396.19Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKPQEANKP  VPAANGTV       PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
        NNTMANFTPGTQMNR PMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG

SwissProt top hitse value%identityAlignment
A5PJN8 Splicing factor 3A subunit 25.8e-7757.27Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMA
        LQ +FK +     KPP  P    ++P+G P    PPPP     PP PP    P  +PPPP PG LP PP  M    P P  P G P +PPP P  +    
Subjt:  LQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMA

Query:  NFTPGTQMNRPPM----PPPPQSFPGQGIRQPP-----PPPPNM
           P      PP     PP P   P   +  PP     PP P +
Subjt:  NFTPGTQMNRPPM----PPPPQSFPGQGIRQPP-----PPPPNM

Q15428 Splicing factor 3A subunit 26.2e-7956.32Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ DSE  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSV--MANG--PPRPM
        LQ +FK +   A           K PP P  NG  P    P  LPPPP      PP PP  P    PP  P  PPP PG  PP P V   A+G  PP P 
Subjt:  LQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSV--MANG--PPRPM

Query:  PPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQSF--PGQGIRQPPP---PPPNMG
            AP + PP P  +   +   P      PP P   PP      P  G+  P P   PPP+ G
Subjt:  PPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQSF--PGQGIRQPPP---PPPNMG

Q54B65 Splicing factor 3A subunit 26.0e-6661.21Show/hide
Query:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR
        E+G K GSGG  S+Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN GNYLAHTQGK+HQT+LA+RAA+E +E P+  + +     
Subjt:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST---PKFFSHW
        +V  +KT+KIGRPGY++ KQ DS+T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLLFAAEPYE IAFK+P+ EID++T    KFF+HW
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST---PKFFSHW

Query:  DPDSKMFTLQLYFK
        D  +K FTLQLYFK
Subjt:  DPDSKMFTLQLYFK

Q62203 Splicing factor 3A subunit 24.7e-7154.87Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF          F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSVMANGPPRPMPPGG
        LQ +FK +   A           K PP P  NG  P    P  LPPPP      PP PP  P    PP  P  PPP PG  PP P V    PP       
Subjt:  LQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSVMANGPPRPMPPGG

Query:  APPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQSF--PGQGIRQPPP--PPPNMG
        AP + PP PV +   +   P      PP P   PP      P  G+  P P   PP  G
Subjt:  APPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQSF--PGQGIRQPPP--PPPNMG

Q6AXT8 Splicing factor 3A subunit 25.8e-7758.02Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMA
        LQ +FK +     KPP  P    ++P+G P    PPPP     PP PP    P  +PPPP PG LP PP  M    P P  P G P +PPP P  +    
Subjt:  LQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMA

Query:  NFTPGTQMNRPPM----PPPPQSFPGQGIRQPPPP---PPNMG
           P T    PP     PP P   P      PP P   PP  G
Subjt:  NFTPGTQMNRPPM----PPPPQSFPGQGIRQPPPP---PPNMG

Arabidopsis top hitse value%identityAlignment
AT2G32600.1 hydroxyproline-rich glycoprotein family protein2.2e-11678.89Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAAS QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP KR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
         VSVR+TVKIGRPGYRVTKQ+D E +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLLFAAEPYEIIAFKVPSTE+DKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGG
        SKMFTLQ+YFK    E NKP     ANG                 PPPPPPPP Q  P   PPPP  G  PPPP  MAN   RPMPP G
Subjt:  SKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGG

AT5G07740.1 actin binding1.6e-0550.39Show/hide
Query:  PPPVPAANGTVPSGAPPRPLPPPPQ--APPPPPPPPQQ-GAPPRVPPPPMPGSLPPPPSVMANGPPRPMPP----GGAPPIPPPPPVGNNTMANFTPGTQ
        PPP P  +G    GAPP P PPP    APPPPPPPP   GAPP  PPPPM G  PPPP     G  +P PP    GGAPP PPPPP+         P  +
Subjt:  PPPVPAANGTVPSGAPPRPLPPPPQ--APPPPPPPPQQ-GAPPRVPPPPMPGSLPPPPSVMANGPPRPMPP----GGAPPIPPPPPVGNNTMANFTPGTQ

Query:  MNRPPMPPPPQSFPGQGIRQPPPPPPNMG
           PP PPPP      G   PPPPPP  G
Subjt:  MNRPPMPPPPQSFPGQGIRQPPPPPPNMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAGAGTGGGGGTCGAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAAAATGAAGCTATTGACCGTAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGA
TCTCGCCAAGGATCCTTATTTTATGCGCAATCATCTTGGAAGCTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTATTTGGCGCATACGCAGGGGA
AGCGGCATCAGACTAATTTGGCCAAGAGAGCTGCCCGTGAAGCAAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGAGGAAGGTCTCTGTTCGCAAAACAGTTAAAATT
GGAAGGCCCGGTTATCGAGTAACAAAGCAATTTGATTCTGAAACAAAGCAGCGATCTCTCCTTTTTCAGATTGAATATCCTGAAATTGAAGACCTAGCAAAGCCTAGGCA
TCGGTTTATGTCCTCTTACGAGCAGCGTGTGCAACCTTTTGACAAACGATACCAATATCTTCTGTTTGCAGCCGAACCATATGAGATAATTGCATTCAAGGTTCCAAGCA
CAGAGATAGACAAATCGACTCCAAAATTCTTTTCACACTGGGATCCGGACTCTAAAATGTTCACGTTGCAATTGTATTTCAAATCCAAGCCACAAGAGGCGAACAAGCCA
CCACCTGTACCTGCAGCAAATGGAACAGTGCCATCTGGTGCACCTCCAAGGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCTCCACCTCCACCCCAGCAAGGAGC
ACCACCAAGAGTTCCTCCTCCTCCAATGCCAGGGTCCTTGCCGCCTCCACCTTCTGTAATGGCCAATGGTCCTCCTAGGCCGATGCCTCCTGGTGGGGCTCCGCCCATCC
CTCCACCACCTCCAGTTGGCAATAATACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGGCCTCCTATGCCGCCTCCTCCACAGAGCTTCCCAGGTCAGGGTATC
CGGCAGCCACCACCACCACCACCCAATATGGGATAG
mRNA sequenceShow/hide mRNA sequence
GGCGATTCGCTTCGACAAACAGAGAAAGGGGTTTTTAGGTCGCCGGAAGGACGAAGAAGATTTCTCAATCGGAGATCAGGTTCCGGTGTAGAAGTGACGCCGAAGTTCGA
CGGGGATGGATAGAGAGTGGGGGTCGAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAAAATGAAGCTATTGACCGTAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACC
ATCGATCTCGCCAAGGATCCTTATTTTATGCGCAATCATCTTGGAAGCTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTATTTGGCGCATACGCA
GGGGAAGCGGCATCAGACTAATTTGGCCAAGAGAGCTGCCCGTGAAGCAAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGAGGAAGGTCTCTGTTCGCAAAACAGTTA
AAATTGGAAGGCCCGGTTATCGAGTAACAAAGCAATTTGATTCTGAAACAAAGCAGCGATCTCTCCTTTTTCAGATTGAATATCCTGAAATTGAAGACCTAGCAAAGCCT
AGGCATCGGTTTATGTCCTCTTACGAGCAGCGTGTGCAACCTTTTGACAAACGATACCAATATCTTCTGTTTGCAGCCGAACCATATGAGATAATTGCATTCAAGGTTCC
AAGCACAGAGATAGACAAATCGACTCCAAAATTCTTTTCACACTGGGATCCGGACTCTAAAATGTTCACGTTGCAATTGTATTTCAAATCCAAGCCACAAGAGGCGAACA
AGCCACCACCTGTACCTGCAGCAAATGGAACAGTGCCATCTGGTGCACCTCCAAGGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCTCCACCTCCACCCCAGCAA
GGAGCACCACCAAGAGTTCCTCCTCCTCCAATGCCAGGGTCCTTGCCGCCTCCACCTTCTGTAATGGCCAATGGTCCTCCTAGGCCGATGCCTCCTGGTGGGGCTCCGCC
CATCCCTCCACCACCTCCAGTTGGCAATAATACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGGCCTCCTATGCCGCCTCCTCCACAGAGCTTCCCAGGTCAGG
GTATCCGGCAGCCACCACCACCACCACCCAATATGGGATAGGCCACTTTAGCATCGTTAAGGCAATGGATTTTAATTGTTAGCCTCATTAGTGAATTTTGATGCACTTTT
CCTTTTCCGTTGTATGATCATATTTCGGCATGTAGAATCATAACATACCAACCTTTGAAATTGTTGTATCTTTTCAGGCAAAATGAGTATTTTGTTAATTGTGCCTATGT
TTTCTTGTAGAGGCTTTGTATTTCAC
Protein sequenceShow/hide protein sequence
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKI
GRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKP
PPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGI
RQPPPPPPNMG