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IVF0019620 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019620
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr01:19766296..19766619
RNA-Seq ExpressionIVF0019620
SyntenyIVF0019620
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040851.1 hypothetical protein E6C27_scaffold333G00760 [Cucumis melo var. makuwa]1.07e-70100Show/hide
Query:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYGRMTLC
        MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYGRMTLC
Subjt:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYGRMTLC

Query:  SSSSLHN
        SSSSLHN
Subjt:  SSSSLHN

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]2.29e-2763.74Show/hide
Query:  FLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTY
        F  D +N  +IE LGW+YFE+E   ELFS +EFFEE+D  Y L+EV+VVSS +KFE  D+Q KG+KK K SIEEPPELELK L NHLKY Y
Subjt:  FLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTY

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]1.23e-2964.21Show/hide
Query:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYG
        MKF A+   Y  IESLGWDY +EE   ELFS +EFFEEED  Y LEEV+V+    KFE  D++TKG KK K SIEEPPE+ELKPL NHLKY Y G
Subjt:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYG

TYK05498.1 uncharacterized protein E5676_scaffold83G002090 [Cucumis melo var. makuwa]1.80e-3065.26Show/hide
Query:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYG
        MKF  D KNY +I+S GW YF+EEV  ELFS KEFFEEED  Y LEE + +S  RKFE  D+Q KG KK K SIEE  ELELKPL  HLKYTY G
Subjt:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYG

TYK25882.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]1.21e-3064.52Show/hide
Query:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTY
        MKF ++V+N   I+SLGWDY EEEVL +LF  +EFF+EED YY  +EV+VVS  RKFE  D QTKG++KNK SIEE PELELKPL N+ KY Y
Subjt:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTY

TrEMBL top hitse value%identityAlignment
A0A5A7TGQ9 Uncharacterized protein7.2e-53100Show/hide
Query:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYGRMTLC
        MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYGRMTLC
Subjt:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYGRMTLC

Query:  SSSSLHN
        SSSSLHN
Subjt:  SSSSLHN

A0A5A7UE99 Uncharacterized protein1.7e-2264.21Show/hide
Query:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYG
        MKF A+   Y  IESLGWDY +EE   ELFS +EFFEEED  Y LEEV+V+    KFE  D++TKG KK K SIEEPPE+ELKPL NHLKY Y G
Subjt:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYG

A0A5A7UF79 Uncharacterized protein1.1e-2163.74Show/hide
Query:  FLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTY
        F  D +N  +IE LGW+YFE+E   ELFS +EFFEE+D  Y L+EV+VVSS +KFE  D+Q KG+KK K SIEEPPELELK L NHLKY Y
Subjt:  FLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTY

A0A5D3C2R8 Uncharacterized protein1.3e-2265.26Show/hide
Query:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYG
        MKF  D KNY +I+S GW YF+EEV  ELFS KEFFEEED  Y LEE + +S  RKFE  D+Q KG KK K SIEE  ELELKPL  HLKYTY G
Subjt:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYG

A0A5D3DQS7 Transposon Ty3-G Gag-Pol polyprotein1.7e-2264.52Show/hide
Query:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTY
        MKF ++V+N   I+SLGWDY EEEVL +LF  +EFF+EED YY  +EV+VVS  RKFE  D QTKG++KNK SIEE PELELKPL N+ KY Y
Subjt:  MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTCTCGCTGATGTTAAAAACTACATCATGATAGAATCCCTTGGGTGGGATTATTTCGAGGAAGAGGTACTCGCTGAACTATTCAGTCTTAAAGAATTCTTTGA
AGAAGAGGACCTCTATTACACCTTGGAAGAAGTAGACGTCGTGTCTAGCGGGAGGAAGTTTGAACCTTTCGATATGCAAACTAAAGGGGATAAGAAGAATAAAATATCAA
TTGAAGAGCCACCAGAATTAGAGCTCAAGCCTTTGGTCAACCACTTGAAATATACATATTATGGGAGAATGACACTCTGCTCGTCATCATCTTTGCACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTTCTCGCTGATGTTAAAAACTACATCATGATAGAATCCCTTGGGTGGGATTATTTCGAGGAAGAGGTACTCGCTGAACTATTCAGTCTTAAAGAATTCTTTGA
AGAAGAGGACCTCTATTACACCTTGGAAGAAGTAGACGTCGTGTCTAGCGGGAGGAAGTTTGAACCTTTCGATATGCAAACTAAAGGGGATAAGAAGAATAAAATATCAA
TTGAAGAGCCACCAGAATTAGAGCTCAAGCCTTTGGTCAACCACTTGAAATATACATATTATGGGAGAATGACACTCTGCTCGTCATCATCTTTGCACAACTGA
Protein sequenceShow/hide protein sequence
MKFLADVKNYIMIESLGWDYFEEEVLAELFSLKEFFEEEDLYYTLEEVDVVSSGRKFEPFDMQTKGDKKNKISIEEPPELELKPLVNHLKYTYYGRMTLCSSSSLHN