; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019626 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019626
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr12:25300289..25301221
RNA-Seq ExpressionIVF0019626
SyntenyIVF0019626
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009521 - photosystem (cellular component)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137413.1 chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus]7.31e-11170.52Show/hide
Query:  MATVTTQASSTVFRPCASRS------SQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLG----------
        MATV TQAS+TVFRPCASRS      S +  + L +          FKVEAKKGEWLPGLPSPTY LDGSLPGDNGFDPLGLAEDPENL           
Subjt:  MATVTTQASSTVFRPCASRS------SQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLG----------

Query:  --------------VLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
                      VLTN+GII VPKWYDAGKAEYFASSSTLFVIEFILFHY          N G+VN+ PIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
Subjt:  --------------VLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLR
        A+EKEIANGRLAMLA LG IVQHNV GKGPFDN +QHISDPWHNTIVQTLR
Subjt:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLR

XP_022137160.1 chlorophyll a-b binding protein P4, chloroplastic-like [Momordica charantia]1.96e-10668.25Show/hide
Query:  MATVTTQASSTVFRPCASRS------SQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLG----------
        MAT  TQAS+ VFRPCASRS      S +  + L +          FKVEAKKGEWLPGLPSP Y LDGSL GDNGFDPLGLAEDPENL           
Subjt:  MATVTTQASSTVFRPCASRS------SQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLG----------

Query:  --------------VLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
                      V T+ GII VPKWYDAGKAEYFASSSTLFVIEFILFHY          N G+VN+ PIFK YSLPPNDVGYPGGIFNPLNFEPTLE
Subjt:  --------------VLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
        AKEKEIANGRLAMLA LG IVQHNV GKGPFDN LQHISDPWHNTI+QTLRG
Subjt:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG

XP_022949090.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata]5.61e-10666.93Show/hide
Query:  MATVTTQASSTVFRPCASRSSQQLLQFLL---------------------LFKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLG-----
        M+ V  QAS+ VFRP ASRS     +FLL                      FKVEAKKGEWLPGLPSP Y LDGSLPGDNGFDPLGLAEDPENL      
Subjt:  MATVTTQASSTVFRPCASRSSQQLLQFLL---------------------LFKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLG-----

Query:  -------------------VLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNF
                           V T++GII VPKWYDAGKAEYFASSSTLFVIEFILFHY          N G+VN+ PIFKQYSLPPNDVGYPGGIFNPLNF
Subjt:  -------------------VLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNF

Query:  EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
        EPTLEAKEKEIANGRLAMLA LG I+QHNV GKGPFDN LQHISDPWHNTIVQTLRG
Subjt:  EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG

XP_031275065.1 chlorophyll a-b binding protein P4, chloroplastic [Pistacia vera]2.03e-10667.46Show/hide
Query:  MATVTTQASSTVFRPCASRS------SQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLG----------
        MATVTTQAS+ VFRPCAS+S      S +L + +            FKVEAKKGEWLPGLPSP Y L+GSLPGDNGFDPLGLAEDPENL           
Subjt:  MATVTTQASSTVFRPCASRS------SQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLG----------

Query:  --------------VLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
                      V T  GII VPKWYDAGKAEYFASSSTLFVIEFILFHY          N G+VN+ PIFKQYSLPPN+VGYPGGIFNPLNF PTLE
Subjt:  --------------VLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
        AKEKE+ANGRLAMLA LG +VQHNV GKGPFDN+LQH+SDPWHNTIVQTLRG
Subjt:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG

XP_038894825.1 chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida]3.58e-10969.44Show/hide
Query:  MATVTTQASSTVFRPCA------SRSSQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLG----------
        MATV TQAS++VFRPC       SR+S +  + L +          FKVEAKKGEWLPGLPSP Y LDGSLPGDNGFDPLGLAEDPENL           
Subjt:  MATVTTQASSTVFRPCA------SRSSQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLG----------

Query:  --------------VLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
                      V T+FGII VPKWYDAGKAEYFASSSTLFVIEFILFHY          N G+VN+ PIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
Subjt:  --------------VLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
        AKEKEIANGRLAMLA LG IVQHNV GKGPFDN LQHISDPWHNTIVQTLRG
Subjt:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG

TrEMBL top hitse value%identityAlignment
A0A0A0LTE5 Chlorophyll a-b binding protein, chloroplastic1.1e-8670.52Show/hide
Query:  MATVTTQASSTVFRPCASR------SSQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-----------
        MATV TQAS+TVFRPCASR      SS +  + L +          FKVEAKKGEWLPGLPSPTY LDGSLPGDNGFDPLGLAEDPENL           
Subjt:  MATVTTQASSTVFRPCASR------SSQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-----------

Query:  -------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
                      VLTN+GII VPKWYDAGKAEYFASSSTLFVIEFILFHY          N G+VN+ PIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
Subjt:  -------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLR
        A+EKEIANGRLAMLA LG IVQHNV GKGPFDN +QHISDPWHNTIVQTLR
Subjt:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLR

A0A2C9UJS9 Chlorophyll a-b binding protein, chloroplastic9.7e-8366.67Show/hide
Query:  MATVTTQASSTVFRPCASRSS---------QQLLQFLLL-------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-----------
        MATVTTQAS+ VFRPCASRS           + + F  +       FKVEAKKGEWLPGLPSP Y L+GSLPGDNGFDPLGLAEDPENL           
Subjt:  MATVTTQASSTVFRPCASRSS---------QQLLQFLLL-------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-----------

Query:  -------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
                      V T  GII VP+WYDAGKAEYFASSSTLFVIEFILFHY          N G+VN+ PIFKQYSLPPN+VGYPGGIFNPLNF PTLE
Subjt:  -------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
        AKEKE+ANGRLAMLA LG +VQHNV GKGPFDN+LQH+SDPWHNTIVQTL G
Subjt:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG

A0A6J1C5V9 Chlorophyll a-b binding protein, chloroplastic2.5e-8368.25Show/hide
Query:  MATVTTQASSTVFRPCASR------SSQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-----------
        MAT  TQAS+ VFRPCASR      SS +  + L +          FKVEAKKGEWLPGLPSP Y LDGSL GDNGFDPLGLAEDPENL           
Subjt:  MATVTTQASSTVFRPCASR------SSQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-----------

Query:  -------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
                      V T+ GII VPKWYDAGKAEYFASSSTLFVIEFILFHY          N G+VN+ PIFK YSLPPNDVGYPGGIFNPLNFEPTLE
Subjt:  -------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
        AKEKEIANGRLAMLA LG IVQHNV GKGPFDN LQHISDPWHNTI+QTLRG
Subjt:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG

A0A6J1GBT1 Chlorophyll a-b binding protein, chloroplastic4.3e-8366.93Show/hide
Query:  MATVTTQASSTVFRPCASRSSQQLLQFLL---------------------LFKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL------
        M+ V  QAS+ VFRP ASRS     +FLL                      FKVEAKKGEWLPGLPSP Y LDGSLPGDNGFDPLGLAEDPENL      
Subjt:  MATVTTQASSTVFRPCASRSSQQLLQFLL---------------------LFKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL------

Query:  ------------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNF
                           V T++GII VPKWYDAGKAEYFASSSTLFVIEFILFHY          N G+VN+ PIFKQYSLPPNDVGYPGGIFNPLNF
Subjt:  ------------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNF

Query:  EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
        EPTLEAKEKEIANGRLAMLA LG I+QHNV GKGPFDN LQHISDPWHNTIVQTLRG
Subjt:  EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG

A0A6P4ACU9 Chlorophyll a-b binding protein, chloroplastic5.7e-8367.46Show/hide
Query:  MATVTTQASSTVFRPCASR------SSQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-----------
        MATVTTQAS+ VFRPCAS+      SS +L + L +          FKVEAKKGEWLPGLPSP Y L+GSLPGDNGFDPLGLAEDPENL           
Subjt:  MATVTTQASSTVFRPCASR------SSQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-----------

Query:  -------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
                      VLT+ GII VPKWYDAGKAEYFASSSTLFVIEFILFHY          N G VN+ PIFKQYSLPPN+ GYPGGIFNPLNF PTLE
Subjt:  -------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
        AKEKE+ANGRLAMLA LG IVQHNV GKGPFDN+LQH+SDPWHNTI+QT RG
Subjt:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic1.2e-3442.64Show/hide
Query:  WLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL------------------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHYNSG
        W PG   P + LDGSLPGD GFDPLGLA DPE+L                         +LT  GI+  P WY AG+ EYF  ++TLF++E +L  +  G
Subjt:  WLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL------------------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHYNSG

Query:  N----------VNKYPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTI
                   VN  PIF    L   DVGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH   G GP DN+  H++DP H TI
Subjt:  N----------VNKYPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTI

P13869 Chlorophyll a-b binding protein, chloroplastic3.6e-3443.15Show/hide
Query:  WLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-------------------GV-----LTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHYNSG
        W PG   P + LDGSLPGD GFDPLGL  DPE+L                   G+     LT  G++  P WY AG+ EYF  ++TLFVIE +L  +  G
Subjt:  WLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-------------------GV-----LTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHYNSG

Query:  N----------VNKYPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTI
                   VN  PIF    L   DVGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH   G GP DN+  H++DP H TI
Subjt:  N----------VNKYPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTI

P27521 Chlorophyll a-b binding protein 4, chloroplastic4.5e-7762.8Show/hide
Query:  MATVTTQASSTVFRPCASR------SSQQL---LQFLLL--------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL----------
        MATVTT AS+++FRPC S+      SS +L   L F  +        FKVEAKKGEWLPGL SP Y L GSL GDNGFDPLGLAEDPENL          
Subjt:  MATVTTQASSTVFRPCASR------SSQQL---LQFLLL--------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL----------

Query:  --------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTL
                       V T  GII VP+WYDAGK +YFASSSTLFVIEFILFHY          N G+VN+ PIFKQYSLP  +VGYPGGIFNPLNF PT 
Subjt:  --------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTL

Query:  EAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQT
        EAKEKE+ANGRLAMLA LG +VQHNV GKGPF+N+LQH+SDPWHNTIVQT
Subjt:  EAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQT

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)1.3e-5254.5Show/hide
Query:  KGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL------------------------GVLTNFGIIKVPKWYD-AGKAEYFASSSTLFVIEFILFH
        KG WLPGL SP Y LDGSL GDNGFDPL LAEDPE+L                         VLT  G++  P+W    GK  YFASSST   +     +
Subjt:  KGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL------------------------GVLTNFGIIKVPKWYD-AGKAEYFASSSTLFVIEFILFH

Query:  Y---------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
                  N G+VN+ PIFK YSLPP++ GYPG +FNPLNF P LE KEKE+ANGRLAMLA LG +VQHNV GKGPF+N+ QH++DPWHNTI+QT+ G
Subjt:  Y---------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic1.8e-7863.89Show/hide
Query:  MATVTTQASSTVFRPCASR------SSQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-----------
        MATVTTQAS+ +F PC  +      SS +L + +            FKVEAKKGEWLPGL SP Y L GSLPGDNGFDPLGLAEDPENL           
Subjt:  MATVTTQASSTVFRPCASR------SSQQLLQFLLL----------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-----------

Query:  -------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
                      V T+ GII VPKWY AGK EYFASSSTLFVIEFIL HY          N G+VN+ PIFKQYSLP  +VGYPGGIFNPLNF PTLE
Subjt:  -------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
        AKEKEIANGRLAMLA LG I+QHNV GKGPFDN+LQHISDPWHNTIVQTL G
Subjt:  AKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 61.8e-2838.14Show/hide
Query:  WLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-------------------GV-----LTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY---
        W PG   P + LDGSLPGD GFDPLGL  DP+ L                   G+     L   G I+   WYDAG  EYFA S+TLFV + +L  +   
Subjt:  WLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-------------------GV-----LTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY---

Query:  -------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWH
                 G+V+  P +     P  DVGYPGG++           EP +  + KEI NGRLAMLA LG   Q     + P +N++ H++DP H
Subjt:  -------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWH

AT1G45474.1 photosystem I light harvesting complex gene 54.1e-3339.81Show/hide
Query:  VEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL------------------------GVLTNFGIIKVPKWYDAGKAEY-FASSSTLFVIEF
        V  ++  WLPGL  P Y LDG+L GD GFDPLGL EDPE+L                         +L   GI  +P WY+AG  ++ FAS+ TL V++F
Subjt:  VEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL------------------------GVLTNFGIIKVPKWYDAGKAEY-FASSSTLFVIEF

Query:  ILFHY----------NSGNVNKYPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHIS
        +L  +          + G+  K   F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A LG  VQ +V   GP DN+++H+S
Subjt:  ILFHY----------NSGNVNKYPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHIS

Query:  DPWHNTIVQTL
        +PWH TI+QTL
Subjt:  DPWHNTIVQTL

AT1G45474.2 photosystem I light harvesting complex gene 54.1e-3339.81Show/hide
Query:  VEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL------------------------GVLTNFGIIKVPKWYDAGKAEY-FASSSTLFVIEF
        V  ++  WLPGL  P Y LDG+L GD GFDPLGL EDPE+L                         +L   GI  +P WY+AG  ++ FAS+ TL V++F
Subjt:  VEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL------------------------GVLTNFGIIKVPKWYDAGKAEY-FASSSTLFVIEF

Query:  ILFHY----------NSGNVNKYPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHIS
        +L  +          + G+  K   F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A LG  VQ +V   GP DN+++H+S
Subjt:  ILFHY----------NSGNVNKYPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHIS

Query:  DPWHNTIVQTL
        +PWH TI+QTL
Subjt:  DPWHNTIVQTL

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A43.2e-7862.8Show/hide
Query:  MATVTTQASSTVFRPCASR------SSQQL---LQFLLL--------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL----------
        MATVTT AS+++FRPC S+      SS +L   L F  +        FKVEAKKGEWLPGL SP Y L GSL GDNGFDPLGLAEDPENL          
Subjt:  MATVTTQASSTVFRPCASR------SSQQL---LQFLLL--------FKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL----------

Query:  --------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTL
                       V T  GII VP+WYDAGK +YFASSSTLFVIEFILFHY          N G+VN+ PIFKQYSLP  +VGYPGGIFNPLNF PT 
Subjt:  --------------GVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY----------NSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTL

Query:  EAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQT
        EAKEKE+ANGRLAMLA LG +VQHNV GKGPF+N+LQH+SDPWHNTIVQT
Subjt:  EAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQT

AT3G61470.1 photosystem I light harvesting complex gene 23.3e-3542.64Show/hide
Query:  WLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-------------------GV-----LTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY---
        W PG   P + LDGSLPGD GFDPLGL+ DP++L                   G+     LT  GI+  P WY AG+ EYF   +TLFV+E IL  +   
Subjt:  WLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENL-------------------GV-----LTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILFHY---

Query:  -------NSGNVNKYPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTI
                 G+VN  P+F    L   DVGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH   G GP DN+  H++DP H TI
Subjt:  -------NSGNVNKYPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGTCACTACCCAGGCTTCCAGCACAGTCTTCCGGCCATGTGCTTCAAGATCGAGCCAACAACTTCTTCAATTCCTATTGCTTTTCAAAGTTGAAGCCAAGAA
AGGAGAGTGGTTGCCGGGTTTGCCATCACCAACTTATGATCTTGATGGAAGCCTTCCAGGTGACAATGGGTTTGATCCTTTGGGACTTGCCGAGGATCCCGAAAACTTAG
GTGTCTTAACTAATTTTGGAATCATCAAGGTACCAAAATGGTACGATGCGGGGAAAGCAGAGTATTTTGCATCGTCATCGACTCTCTTTGTGATTGAGTTCATTCTGTTC
CATTATAACTCAGGAAATGTAAATAAATATCCAATATTTAAGCAATACAGCTTGCCACCAAATGATGTTGGATACCCAGGGGGAATTTTCAACCCACTCAACTTTGAACC
AACTCTTGAGGCCAAAGAAAAGGAGATTGCTAATGGAAGACTGGCAATGTTGGCATCCTTGGGACTCATTGTTCAACACAATGTGCCTGGAAAAGGTCCATTTGACAACA
TCTTGCAGCACATTTCAGACCCATGGCACAACACTATAGTTCAAACACTAAGGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTGTCACTACCCAGGCTTCCAGCACAGTCTTCCGGCCATGTGCTTCAAGATCGAGCCAACAACTTCTTCAATTCCTATTGCTTTTCAAAGTTGAAGCCAAGAA
AGGAGAGTGGTTGCCGGGTTTGCCATCACCAACTTATGATCTTGATGGAAGCCTTCCAGGTGACAATGGGTTTGATCCTTTGGGACTTGCCGAGGATCCCGAAAACTTAG
GTGTCTTAACTAATTTTGGAATCATCAAGGTACCAAAATGGTACGATGCGGGGAAAGCAGAGTATTTTGCATCGTCATCGACTCTCTTTGTGATTGAGTTCATTCTGTTC
CATTATAACTCAGGAAATGTAAATAAATATCCAATATTTAAGCAATACAGCTTGCCACCAAATGATGTTGGATACCCAGGGGGAATTTTCAACCCACTCAACTTTGAACC
AACTCTTGAGGCCAAAGAAAAGGAGATTGCTAATGGAAGACTGGCAATGTTGGCATCCTTGGGACTCATTGTTCAACACAATGTGCCTGGAAAAGGTCCATTTGACAACA
TCTTGCAGCACATTTCAGACCCATGGCACAACACTATAGTTCAAACACTAAGGGGATAG
Protein sequenceShow/hide protein sequence
MATVTTQASSTVFRPCASRSSQQLLQFLLLFKVEAKKGEWLPGLPSPTYDLDGSLPGDNGFDPLGLAEDPENLGVLTNFGIIKVPKWYDAGKAEYFASSSTLFVIEFILF
HYNSGNVNKYPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG