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IVF0019666 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019666
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr08:18340108..18340503
RNA-Seq ExpressionIVF0019666
SyntenyIVF0019666
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040963.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.03e-7892.37Show/hide
Query:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
        MEIIREGPSASR P+LDGKNYSYWKP+MIFFIK LDGKAWRALVAGYDPPMITVNGV VPKPEVDWTDAEEQASVGNARALN IFN VDLNVFKLINSCS
Subjt:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS

Query:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF
        T+KEAWKTLEVA EGTSKVKISRLQLIT KF
Subjt:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF

KAA0053604.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.27e-8090.84Show/hide
Query:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
        MEII+EGPSASR P+LDGKNYSYWKP+MIFFIKTLDGKAWRAL+AGY+PPMITVNGVSVPKPEVDWT+AEEQASVGNARALN IFNGVDLNVFKLIN C 
Subjt:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS

Query:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF
        TAKEAWKTLEVA EGTSKVKISRLQLIT+KF
Subjt:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF

TYJ97129.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.41e-7890.08Show/hide
Query:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
        MEIIREG SASR P+LD KNYS WKP+MIFFIKTLDGKAWRAL+AGYDPPMITVNGVSVPKPEVDW DAE+QASVGNARALN IFNG+DLNVFKLINSCS
Subjt:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS

Query:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF
        TAKEAWKTLEVA EGTSKVKISRLQLIT KF
Subjt:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF

TYK02457.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.00e-84100Show/hide
Query:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
        MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
Subjt:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS

Query:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF
        TAKEAWKTLEVACEGTSKVKISRLQLITYKF
Subjt:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF

TYK19191.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.09e-8192.37Show/hide
Query:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
        MEII+EGPSASR P+LDGKNYSYWKPQMIFFIKTLDGKAWRALVAGY+PPMITVNGVSVPKPEVDWT+AEEQASVGNARALN IFNGVDLNVFKLIN C 
Subjt:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS

Query:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF
        TAKEAWKTLEVA EGTSKVKISRLQLIT+KF
Subjt:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF

TrEMBL top hitse value%identityAlignment
A0A5A7TCV9 Gag-pol polyprotein2.1e-6292.37Show/hide
Query:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
        MEIIREGPSASR P+LDGKNYSYWKP+MIFFIK LDGKAWRALVAGYDPPMITVNGV VPKPEVDWTDAEEQASVGNARALN IFN VDLNVFKLINSCS
Subjt:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS

Query:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF
        T+KEAWKTLEVA EGTSKVKISRLQLIT KF
Subjt:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF

A0A5A7UJR8 Putative mitochondrial protein3.2e-6393.89Show/hide
Query:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
        MEIIREGPSASR PVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMIT NGVSVPK EVDWTDAEEQASVGNARA N IFNGVDLN+FKLINSCS
Subjt:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS

Query:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF
        TAKEAWKTLEVA EGTSKVKISRLQLIT KF
Subjt:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF

A0A5D3B9V9 Gag-pol polyprotein1.6e-6291.6Show/hide
Query:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
        MEIIREGPS SR PVLDGKNYSYWKP+MIFFI+TLDG+AWRALVAGYDPPMIT+NGVSVPKPEVDWTDAEEQ+ VGNARALN IFNGVDLNVFKLINSCS
Subjt:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS

Query:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF
        TAKEAWKTLEVA EGTSKVKISRLQLIT KF
Subjt:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF

A0A5D3BSP9 Gag-proteinase polyprotein2.3e-69100Show/hide
Query:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
        MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
Subjt:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS

Query:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF
        TAKEAWKTLEVACEGTSKVKISRLQLITYKF
Subjt:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF

A0A5D3D6K4 Gag-pol polyprotein3.2e-6392.37Show/hide
Query:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS
        MEII+EGPSASR P+LDGKNYSYWKPQMIFFIKTLDGKAWRALVAGY+PPMITVNGVSVPKPEVDWT+AEEQASVGNARALN IFNGVDLNVFKLIN C 
Subjt:  MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCS

Query:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF
        TAKEAWKTLEVA EGTSKVKISRLQLIT+KF
Subjt:  TAKEAWKTLEVACEGTSKVKISRLQLITYKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAATCAGAGAAGGACCATCTGCATCACGTCTTCCTGTCCTTGATGGTAAAAACTACTCATATTGGAAACCTCAGATGATCTTCTTCATTAAGACGTTAGATGG
AAAAGCTTGGAGAGCTCTTGTGGCAGGCTATGATCCTCCTATGATTACCGTGAATGGTGTTTCGGTTCCAAAGCCTGAAGTTGATTGGACCGATGCTGAAGAGCAAGCAT
CCGTTGGGAATGCCAGAGCACTTAACACAATATTCAATGGTGTTGACCTGAACGTTTTCAAGTTAATAAATTCGTGCAGTACAGCTAAAGAAGCTTGGAAAACCTTGGAG
GTAGCGTGTGAAGGTACTTCCAAAGTAAAAATTTCTAGATTACAGTTGATAACATATAAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATAATCAGAGAAGGACCATCTGCATCACGTCTTCCTGTCCTTGATGGTAAAAACTACTCATATTGGAAACCTCAGATGATCTTCTTCATTAAGACGTTAGATGG
AAAAGCTTGGAGAGCTCTTGTGGCAGGCTATGATCCTCCTATGATTACCGTGAATGGTGTTTCGGTTCCAAAGCCTGAAGTTGATTGGACCGATGCTGAAGAGCAAGCAT
CCGTTGGGAATGCCAGAGCACTTAACACAATATTCAATGGTGTTGACCTGAACGTTTTCAAGTTAATAAATTCGTGCAGTACAGCTAAAGAAGCTTGGAAAACCTTGGAG
GTAGCGTGTGAAGGTACTTCCAAAGTAAAAATTTCTAGATTACAGTTGATAACATATAAGTTTTAG
Protein sequenceShow/hide protein sequence
MEIIREGPSASRLPVLDGKNYSYWKPQMIFFIKTLDGKAWRALVAGYDPPMITVNGVSVPKPEVDWTDAEEQASVGNARALNTIFNGVDLNVFKLINSCSTAKEAWKTLE
VACEGTSKVKISRLQLITYKF