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IVF0019702 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019702
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr09:12396961..12404141
RNA-Seq ExpressionIVF0019702
SyntenyIVF0019702
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]3.85e-3042.57Show/hide
Query:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTS
        M +ASNEWRTLV CQKPLEMHLQ+RK+AEL+DFW  S         Q N SEN  + VF SW KK SP+                 +F       + H S
Subjt:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTS

Query:  SMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRK
          L D                                   TL+TST TP +L DTFSQGI ++A SSLE E  CD K+S+ WPM+PT  +RSSGV+N  K
Subjt:  SMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRK

Query:  CT
        CT
Subjt:  CT

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]6.30e-2840Show/hide
Query:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTS
        MANASNEW+TLV CQKPLEM+LQ+RKQ ELKDFW         CSSQ NAS+N PDS F SW KKRSP                   +G      + H S
Subjt:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTS

Query:  SMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRK
          L  ++++ F+R                               S H                  S LE ELWCD K S+RWP++PTSGE SSG+RN  K
Subjt:  SMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRK

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]6.22e-4046.54Show/hide
Query:  PTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFKG--------------------------------------FSRPGAKSGLPTVSSLCSVLVLS
        PT+SSLCSVLVISL IF ART RT THT  M+ DTFF G                                      FSRPGAKSG PTVSSLCSVLV+S
Subjt:  PTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFKG--------------------------------------FSRPGAKSGLPTVSSLCSVLVLS

Query:  LSIFGTRTLRTSTHTPGVLSDTFSQ------------------------------------------------GISREASSSLEAELWCDSKRSERWPMI
        LSIFG RTLRTSTHT G+L DTFS                                                  + R  +SSLE ELWCD KRS+RWPM 
Subjt:  LSIFGTRTLRTSTHTPGVLSDTFSQ------------------------------------------------GISREASSSLEAELWCDSKRSERWPMI

Query:  PTSGERSSGVRNQRKCT
        PT+GERSSGVRN  KCT
Subjt:  PTSGERSSGVRNQRKCT

TYK15439.1 uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]1.27e-3249.04Show/hide
Query:  DFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTR
        DFRCSSQ N S+N  DSVF SW                                                      KSG PTVSS+CSVLV+ LSIFG  
Subjt:  DFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTR

Query:  TLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRN
          RTSTHTPG+L D FS GI REA  SLE ELWCD KRSERWPM+PTSG+RSS VRN
Subjt:  TLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRN

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]2.63e-5044.22Show/hide
Query:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAI-----------------------------
        MANASNEWR LV CQKPLEMHLQ+RK         R ELEDFRCSSQ N SEN PDS F SW KKRSPD                               
Subjt:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAI-----------------------------

Query:  ---------------------------------------------------------PTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFK-----
                                                                 PTVS+LCSVLV SLSIFGA TPRT THT  MLPDTF +     
Subjt:  ---------------------------------------------------------PTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFK-----

Query:  -GFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRKCT
          F   G          L  +   S+ + G+ T RTSTHT G+L DTFS GI REA SSLE EL CD K S+RWPM+PT GERSSG RN  KCT
Subjt:  -GFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRKCT

TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein2.7e-2440Show/hide
Query:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTS
        MANASNEW+TLV CQKPLEM+LQ+RKQ ELKDFW         CSSQ NAS+N PDS F SW KKRSP                   +G      + H S
Subjt:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTS

Query:  SMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRK
          L  ++++ F+                              R S H                  S LE ELWCD K S+RWP++PTSGE SSG+RN  K
Subjt:  SMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRK

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein3.7e-3446.54Show/hide
Query:  PTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFKG--------------------------------------FSRPGAKSGLPTVSSLCSVLVLS
        PT+SSLCSVLVISL IF ART RT THT  M+ DTFF G                                      FSRPGAKSG PTVSSLCSVLV+S
Subjt:  PTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFKG--------------------------------------FSRPGAKSGLPTVSSLCSVLVLS

Query:  LSIFGTRTLRTSTHTPGVLSDTFSQ------------------------------------------------GISREASSSLEAELWCDSKRSERWPMI
        LSIFG RTLRTSTHT G+L DTFS                                                  + R  +SSLE ELWCD KRS+RWPM 
Subjt:  LSIFGTRTLRTSTHTPGVLSDTFSQ------------------------------------------------GISREASSSLEAELWCDSKRSERWPMI

Query:  PTSGERSSGVRNQRKCT
        PT+GERSSGVRN  KCT
Subjt:  PTSGERSSGVRNQRKCT

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein5.8e-0370.59Show/hide
Query:  RSELEDFRCSSQTNASENVPDSVFPSWDKKRSPD
        R++L+DFRCSSQ NASEN  DSVF SW KK +PD
Subjt:  RSELEDFRCSSQTNASENVPDSVFPSWDKKRSPD

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein1.1e-2549.04Show/hide
Query:  DFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTR
        DFRCSSQ N S+N  DSVF SW                                                      KSG PTVSS+CSVLV+ LSIFG  
Subjt:  DFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTR

Query:  TLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRN
          RTSTHTPG+L D FS GI REA  SLE ELWCD KRSERWPM+PTSG+RSS VRN
Subjt:  TLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRN

A0A5D3DFP2 Uncharacterized protein1.7e-4244.22Show/hide
Query:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAI-----------------------------
        MANASNEWR LV CQKPLEMHLQ+R         KR ELEDFRCSSQ N SEN PDS F SW KKRSPD                               
Subjt:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAI-----------------------------

Query:  ---------------------------------------------------------PTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFK-----
                                                                 PTVS+LCSVLV SLSIFGA TPRT THT  MLPDTF +     
Subjt:  ---------------------------------------------------------PTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFK-----

Query:  -GFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRKCT
          F   G          L  +   S+ + G+ T RTSTHT G+L DTFS GI REA SSLE EL CD K S+RWPM+PT GERSSG RN  KCT
Subjt:  -GFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRKCT

A0A5D3E5W4 NBS-LRR type resistance protein2.4e-2542.57Show/hide
Query:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTS
        M +ASNEWRTLV CQKPLEMHLQ+RK+AEL+DFW           SQ N SEN  + VF SW KK SP+                 +F       + H S
Subjt:  MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTS

Query:  SMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRK
          L D                                   TL+TST TP +L DTFSQGI ++A SSLE E  CD K+S+ WPM+PT  +RSSGV+N  K
Subjt:  SMLPDTFFKGFSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRK

Query:  CT
        CT
Subjt:  CT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCCGTGTCAGAAACCACTAGAAATGCACTTGCAGCAAAGGAAACAGGCTGAGCTTAAGGACTTCTGGAAACGGTC
TGAGCTCGAGGACTTTCGGTGTTCGTCCCAAACAAATGCGAGCGAGAATGTCCCGGACTCAGTTTTCCCGTCCTGGGACAAAAAGCGGTCCCCCGACGCGATCCCGACGG
TTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCAAGGACTTTAACCCACACTTCTAGCATGCTCCCTGATACATTTTTCAAAGGT
TTTTCCCGTCCTGGTGCAAAAAGCGGTCTCCCGACGGTTTCTTCTCTTTGCTCCGTATTGGTCCTAAGTCTTTCGATTTTTGGGACTCGTACTCTGAGGACTTCAACCCA
CACTCCTGGCGTGCTCTCTGACACGTTTTCTCAAGGTATAAGTCGTGAAGCGAGCTCCTCGTTGGAGGCAGAACTGTGGTGCGATTCAAAACGGTCCGAAAGATGGCCAA
TGATTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCAAAGGAAATGCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCCGTGTCAGAAACCACTAGAAATGCACTTGCAGCAAAGGAAACAGGCTGAGCTTAAGGACTTCTGGAAACGGTC
TGAGCTCGAGGACTTTCGGTGTTCGTCCCAAACAAATGCGAGCGAGAATGTCCCGGACTCAGTTTTCCCGTCCTGGGACAAAAAGCGGTCCCCCGACGCGATCCCGACGG
TTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCAAGGACTTTAACCCACACTTCTAGCATGCTCCCTGATACATTTTTCAAAGGT
TTTTCCCGTCCTGGTGCAAAAAGCGGTCTCCCGACGGTTTCTTCTCTTTGCTCCGTATTGGTCCTAAGTCTTTCGATTTTTGGGACTCGTACTCTGAGGACTTCAACCCA
CACTCCTGGCGTGCTCTCTGACACGTTTTCTCAAGGTATAAGTCGTGAAGCGAGCTCCTCGTTGGAGGCAGAACTGTGGTGCGATTCAAAACGGTCCGAAAGATGGCCAA
TGATTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCAAAGGAAATGCACTTGA
Protein sequenceShow/hide protein sequence
MANASNEWRTLVPCQKPLEMHLQQRKQAELKDFWKRSELEDFRCSSQTNASENVPDSVFPSWDKKRSPDAIPTVSSLCSVLVISLSIFGARTPRTLTHTSSMLPDTFFKG
FSRPGAKSGLPTVSSLCSVLVLSLSIFGTRTLRTSTHTPGVLSDTFSQGISREASSSLEAELWCDSKRSERWPMIPTSGERSSGVRNQRKCT