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IVF0019730 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019730
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNon-LTR retroelement reverse transcriptase-like protein
Genome locationchr01:25230286..25230561
RNA-Seq ExpressionIVF0019730
SyntenyIVF0019730
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]5.66e-3076.32Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQ
        M +ASNEWRTLVRCQKPLEMHLQ+RKRAELEDF   SQEN SEN  + VFSS GKK SP+GFFP  RIGHKSF+L+
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQ

KAA0040927.1 hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa]8.95e-3566.67Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDF---------------RCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNP
        + NAS EWRTLVRCQKPL+MHLQ+RK AELEDF               RCSS ENASEN  DSVFSSCG+K+  D FFP LRIGH+SF+L+GS SEDFNP
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDF---------------RCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNP

Query:  HS
        HS
Subjt:  HS

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]1.66e-3978.89Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNPHSWNA
        MANASNEW+TLVRCQKPLEM+LQRRK+ EL+DF CSSQENAS+N PDS FSS GKKRSP GFF  LRIGHKSF+LQGS  EDFN HSW++
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNPHSWNA

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.68e-2777.14Show/hide
Query:  LQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNPHSWNAP
        ++RR RA+L+DFRCSSQENASEN  DSVFSS  KK +PDGFFP LRIGHKSF+L+GS SEDFNPHSW+AP
Subjt:  LQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNPHSWNAP

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]5.27e-3590.28Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKS
        MANASNEWR LVRCQKPLEMHLQRRKR ELEDFRCSSQEN SEN PDS FSS GKKRSPDGFFP LRIGHKS
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKS

TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein1.6e-3278.89Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNPHSWNA
        MANASNEW+TLVRCQKPLEM+LQRRK+ EL+DF CSSQENAS+N PDS FSS GKKRSP GFF  LRIGHKSF+LQGS  EDFN HSW++
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNPHSWNA

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein3.3e-2277.14Show/hide
Query:  LQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNPHSWNAP
        ++RR RA+L+DFRCSSQENASEN  DSVFSS  KK +PDGFFP LRIGHKSF+L+GS SEDFNPHSW+AP
Subjt:  LQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNPHSWNAP

A0A5D3CGX3 Uncharacterized protein2.0e-2766.67Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAELED---------------FRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNP
        + NAS EWRTLVRCQKPL+MHLQ+RK AELED               FRCSS ENASEN  DSVFSSCG+K+  D FFP LRIGH+SF+L+GS SEDFNP
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAELED---------------FRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNP

Query:  HS
        HS
Subjt:  HS

A0A5D3DFP2 Uncharacterized protein8.1e-2990.28Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKS
        MANASNEWR LVRCQKPLEMHLQRRKR ELEDFRCSSQEN SEN PDS FSS GKKRSPDGFFP LRIGHKS
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKS

A0A5D3E5W4 NBS-LRR type resistance protein1.0e-2376.32Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQ
        M +ASNEWRTLVRCQKPLEMHLQ+RKRAELEDF   SQEN SEN  + VFSS GKK SP+GFFP  RIGHKSF+L+
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTTCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTCGAGGACTTCCGGTGCTCGTC
CCAAGAAAACGCGAGCGAGAATGTCCCGGACTCCGTTTTCTCGTCCTGCGGTAAAAAGCGGTCTCCCGACGGTTTCTTCCCTTTTCTCCGTATTGGTCATAAGTCTTTCA
ATCTTCAGGGCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGAATGCTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTTCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTCGAGGACTTCCGGTGCTCGTC
CCAAGAAAACGCGAGCGAGAATGTCCCGGACTCCGTTTTCTCGTCCTGCGGTAAAAAGCGGTCTCCCGACGGTTTCTTCCCTTTTCTCCGTATTGGTCATAAGTCTTTCA
ATCTTCAGGGCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGAATGCTCCCTGA
Protein sequenceShow/hide protein sequence
MANASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENASENVPDSVFSSCGKKRSPDGFFPFLRIGHKSFNLQGSCSEDFNPHSWNAP