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IVF0019768 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019768
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr06:21131417..21131695
RNA-Seq ExpressionIVF0019768
SyntenyIVF0019768
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025506.1 transcription initiation factor TFIID subunit 2-like [Cucumis melo var. makuwa]4.15e-58100Show/hide
Query:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
        MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
Subjt:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
XP_016899859.1 PREDICTED: uncharacterized protein LOC107990692 [Cucumis melo]3.53e-3280.26Show/hide
Query:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVI
        +AV RYDIEKFDGKG FTLWKAK+KAIVGQ+K LKA+ DPEKLPK M QE+ ETMENAAY AIVLNLSD+VLRE+I
Subjt:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVI
XP_038880370.1 uncharacterized protein LOC120072018 [Benincasa hispida]4.92e-2653.26Show/hide
Query:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
        MA  RY+IEKFDGK  F L KAK+KA++GQ+K L AI DP K P+ +++ +KET+E  AYG I+LN++D++LR+++ + TAY +W KL E+Y
Subjt:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
XP_038889933.1 uncharacterized protein LOC120079695 [Benincasa hispida]1.01e-2655.43Show/hide
Query:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
        M   R++IEKFDGK  F LWKAK+KA++GQ+K L AI D  K PK  T  EKE +E  AYG IVLN++DNVLR+++ ++TA+ +W KL E+Y
Subjt:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
XP_038890043.1 uncharacterized protein LOC120079747 [Benincasa hispida]2.98e-2757.61Show/hide
Query:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
        MA  RY+IEKFD K  F LWK K+K ++GQ+K L AI DP K P+ +T+ EKET+E  A G IVLN++DNVLR+VI + TAY +W KL E+Y
Subjt:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
TrEMBL top hitse value%identityAlignment
A0A1S4DV47 uncharacterized protein LOC1079906922.1e-2480.26Show/hide
Query:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVI
        +AV RYDIEKFDGKG FTLWKAK+KAIVGQ+K LKA+ DPEKLPK M QE+ ETMENAAY AIVLNLSD+VLRE+I
Subjt:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVI
A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-949.0e-2048.91Show/hide
Query:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
        M   +++IEKFDG G FTLW  ++ AI+G +K LKA+ DP++LP  +T+ E+ET+E  AY  +++N++DNVLR+VI + TA+  W+KL+ LY
Subjt:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
A0A5C7GXL9 Sucrose-phosphate phosphatase2.2e-1854.55Show/hide
Query:  RYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
        ++DI+KFDG G F +W+ K+KA++ Q+K LKAI  PEKLP  +T E+K+ M   A G I+LNLSDNVLRE+  ++TA  +W+KLE LY
Subjt:  RYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
A0A5C7HB65 gag_pre-integrs domain-containing protein2.2e-1854.55Show/hide
Query:  RYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
        ++DI+KFDG G F +W+ K+KA++ Q+K LKAI  PEKLP  +T E+K+ M   A G I+LNLSDNVLRE+  ++TA  +W+KLE LY
Subjt:  RYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
A0A5D3BQH4 Transcription initiation factor TFIID subunit 2-like6.9e-44100Show/hide
Query:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
        MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
Subjt:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.4e-0933.7Show/hide
Query:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
        M+  +Y++ KF+G   F+ W+ +M+ ++ Q+   K +    K P  M  E+   ++  A  AI L+LSD+V+  +I ++TA G+W +LE LY
Subjt:  MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTAGAAAGATATGATATTGAGAAGTTTGATGGTAAGGGATATTTTACCTTATGGAAAGCAAAGATGAAAGCCATCGTTGGCCAGCGAAAGAAATTGAAAGCTAT
CATTGATCCAGAAAAGCTACCTAAAAAAATGACTCAAGAAGAAAAAGAAACTATGGAAAATGCAGCCTATGGTGCCATAGTTTTAAACCTAAGTGACAATGTTCTTAGAG
AGGTAATTGGTAAAGAAACAGCTTATGGAATGTGGCAGAAATTGGAAGAACTTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTAGAAAGATATGATATTGAGAAGTTTGATGGTAAGGGATATTTTACCTTATGGAAAGCAAAGATGAAAGCCATCGTTGGCCAGCGAAAGAAATTGAAAGCTAT
CATTGATCCAGAAAAGCTACCTAAAAAAATGACTCAAGAAGAAAAAGAAACTATGGAAAATGCAGCCTATGGTGCCATAGTTTTAAACCTAAGTGACAATGTTCTTAGAG
AGGTAATTGGTAAAGAAACAGCTTATGGAATGTGGCAGAAATTGGAAGAACTTTATTAG
Protein sequenceShow/hide protein sequence
MAVERYDIEKFDGKGYFTLWKAKMKAIVGQRKKLKAIIDPEKLPKKMTQEEKETMENAAYGAIVLNLSDNVLREVIGKETAYGMWQKLEELY