; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019782 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019782
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr11:2494598..2495506
RNA-Seq ExpressionIVF0019782
SyntenyIVF0019782
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045720.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]1.05e-163100Show/hide
Query:  MKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITM
        MKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITM
Subjt:  MKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITM

Query:  LPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKM
        LPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKM
Subjt:  LPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKM

Query:  KIKIYLHNILRLGQIPHFPYTPSCIISH
        KIKIYLHNILRLGQIPHFPYTPSCIISH
Subjt:  KIKIYLHNILRLGQIPHFPYTPSCIISH

KAA0045730.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]1.55e-20092.38Show/hide
Query:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS
        MGG+NQ RSRRSKKPFIRQVWASNFNSEI QFDECL+FHTILTIDTEFPGFIIQSPR+SID EIYK+F FNVNQMKLIQLGITASND GQIGGSWEFNFS
Subjt:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA
        DFDFQVD+HSPSAIPFLEKNGLDFKKLKK GIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLIT+LP+SMEEFA LVVNEVGIVRDLKHMA
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA

Query:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPHFPYTPSCII
        RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRF MT EVCNGFLYGFS+SLESMKM     IY HNILRLGQIPHFPYTPSCII
Subjt:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPHFPYTPSCII

Query:  SH
        SH
Subjt:  SH

KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]1.43e-11260.51Show/hide
Query:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS
        MG +N+ R RR + P I++VWASNF+ EI + + CLQ + IL+IDTEFPG I  +P  SID  +Y+D  FNVNQ KLIQLG+TAS++ GQ+ GSWEFNFS
Subjt:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA
        DFD Q+D  +PS+I FLE+NGLDF KLKK GIP++ FT  F  II++  + +WVTFHGLYDIGYL+KAMG+   LPESMEEFA +V   VG+VRDLK +A
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA

Query:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKI
        R+CEGLE GR+GLERLG++L +KRFGMKH+AGSDSLLTA  H +M + FR+ S   +G LYG    LE MK+   I
Subjt:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKI

XP_031736916.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]3.13e-17384.38Show/hide
Query:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS
        MGG+NQ RS R K P IRQVWASNF+SEI +FDECL+FHTILTIDTEFPGFI QSPR SID E+YKDFCFNVNQ KLIQLGITAS+DLGQIGGSWEFNFS
Subjt:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA
        DFDF+ DAHSP AIPFLE NGLD KK+KKDGIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLIT+LP+SMEEFA +VVNEVGIVRDLKHMA
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA

Query:  RFCEGLED-GRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLG
        +FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAH EMV+RF M S+VCNGFLYGFS++LESMKMKMK+KI  HNILR  
Subjt:  RFCEGLED-GRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLG

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]1.25e-13766.21Show/hide
Query:  RSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHS
        R +K  I +VWASNF++EI + +ECL+FHTI++IDTEFPGFI  SP  SID  +Y+DF FNVNQ KLIQLG+TA +D G+IGGSWEFNFSDFD ++DA S
Subjt:  RSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHS

Query:  PSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGR
        PS+  FLE+NGLDF KLKK GIPI  FT KF+ II+K ++FRWVTFHGLYDIGYLIKAMG+  +LPE+MEEFA +VV  +GIVRDLKHMARFCEGLEDG+
Subjt:  PSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGR

Query:  LGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPH----FPYTPSCI
        LGLERLGK+L++KR+G+KHNAGSDSLLTASAHFEM++RF M +E+C+G+LYGFS  L+SM + M +  +   I+  GQIP+    + Y PS I
Subjt:  LGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPH----FPYTPSCI

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease1.1e-13584.97Show/hide
Query:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS
        MGG+NQ RS R +KP IRQVWASNF+SEI +FDECL+FHTILTIDTEFPGFI QSPR SID E+YKDFCFNVNQ KLIQLGITAS+DLGQIGGSWEFNFS
Subjt:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA
        DFDF+ DAHSP AIPFLE NGLD KK+KKDGIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLIT+LP+SMEEFA +VVNEVGIVRDLKHMA
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA

Query:  RFCEGLED-GRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILR
        +FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAH EMV+RF M S+VCNGFLYGFS++LESMKMKMK+KI  HNILR
Subjt:  RFCEGLED-GRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILR

A0A5A7TRF3 Putative CCR4-associated factor 1-like protein 83.3e-127100Show/hide
Query:  MKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITM
        MKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITM
Subjt:  MKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITM

Query:  LPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKM
        LPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKM
Subjt:  LPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKM

Query:  KIKIYLHNILRLGQIPHFPYTPSCIISH
        KIKIYLHNILRLGQIPHFPYTPSCIISH
Subjt:  KIKIYLHNILRLGQIPHFPYTPSCIISH

A0A5A7TRG1 Poly(A)-specific ribonuclease2.6e-15692.38Show/hide
Query:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS
        MGG+NQ RSRRSKKPFIRQVWASNFNSEI QFDECL+FHTILTIDTEFPGFIIQSPR+SID EIYK+F FNVNQMKLIQLGITASND GQIGGSWEFNFS
Subjt:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA
        DFDFQVD+HSPSAIPFLEKNGLDFKKLKK GIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLIT+LP+SMEEFA LVVNEVGIVRDLKHMA
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA

Query:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPHFPYTPSCII
        RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRF MT EVCNGFLYGFS+SLESMKM     IY HNILRLGQIPHFPYTPSCII
Subjt:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPHFPYTPSCII

Query:  SH
        SH
Subjt:  SH

A0A6J1CXP9 Poly(A)-specific ribonuclease1.1e-8756.7Show/hide
Query:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS
        MG   +  SRR     IR+VW+ NF+ E+   ++CL  + ILTIDTEFPGFI  +P  +I+ ++Y DF FNVN+ KLIQLG+TAS+++G IG +WEFNFS
Subjt:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA
        DFD Q+D H+ S++ FL++NGLDF KLK+ GIPI  FT K   + +K  I RWVTFHGLYDIGYL+KAMG+   +PESMEEFA LV   +G V DLKHMA
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA

Query:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPH
        +FCEGLEDG+LGLE+L +++N+KRFG KH+AGSDSLLTAS + +M  +F + SEVC+GFLYG       +++K+  KI L+  L  GQIP+
Subjt:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPH

A0A6J1G7L2 Poly(A)-specific ribonuclease6.1e-8961.11Show/hide
Query:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS
        MG +N+ R RR + P I++VWASNF+ EI + + CLQ + IL+IDTEFPG I  +P  SID  +Y+D  FNVNQ KLIQLG+TAS++ GQ+ GSWEFNFS
Subjt:  MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA
        DFD Q+D  +PS+I FLE+NGLDF KLKK GIP++ FT  F  II++  + +WVTFHGLYDIGYL+KAMG+   LPESMEEFA +V   VG+VRDLK +A
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMA

Query:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESM
        R+CEGLE GR+GLERLG++L +KRFGMKH+AGSDSLLTA  H +M + FR+ SE  +G LYG    L+ M
Subjt:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESM

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 52.0e-3639.13Show/hide
Query:  QVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLE
        +VW  N  +E+    +CL+    + IDTEFPG + ++P ++ D   Y+D  FNV+   LIQLG+T       I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLE

Query:  KNGLDFKKLKKDGIPIASFTKKFLPII-QKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVG-IVRDLKHMARFCEGLEDGRLGLERL
         NGLD  K++++GI I  F  +F  I+ +K    RWVTF G YD  YL+K +     LPE+ +EF   V   +G  V D+K MA  C GL   R GL+R+
Subjt:  KNGLDFKKLKKDGIPIASFTKKFLPII-QKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVG-IVRDLKHMARFCEGLEDGRLGLERL

Query:  GKILNKKRFGMKHNAGSDSLLTASAHFEMV
          +L  +R G  H+AGSDS LTA    +++
Subjt:  GKILNKKRFGMKHNAGSDSLLTASAHFEMV

Q9LXM2 Probable CCR4-associated factor 1 homolog 95.0e-3237.16Show/hide
Query:  RQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSP-RNSIDVEIYKDFCFNVNQMKLIQLGITASN------DLG---QIGGSWEFNFSDFDFQVD
        R+VWA N  SE +   E +  +  +++DTEFPG I +S  R +   ++Y     NV+ + LIQ+G+T S+      DLG     G  WEFNF DFD   D
Subjt:  RQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSP-RNSIDVEIYKDFCFNVNQMKLIQLGITASN------DLG---QIGGSWEFNFSDFDFQVD

Query:  AHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLP--IIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVG-IVRDLKHMARFCE
        AH+P +I  L + G+DF++  +DG+    F +  +   ++   ++  WVTFH  YD GYL+K +     LP ++ EF  ++    G  V D+KHM +FCE
Subjt:  AHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLP--IIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVG-IVRDLKHMARFCE

Query:  GLEDGRLGLERLGKILNKKR-FGMKHNAGSDSLLTASAHFEMVKRFRMTS--EVCNGFLYG
            G  GL+R+ + L   R  G  H AGSDSLLT  A   M   + +    E   G LYG
Subjt:  GLEDGRLGLERLGKILNKKR-FGMKHNAGSDSLLTASAHFEMVKRFRMTS--EVCNGFLYG

Q9LXM4 Putative CCR4-associated factor 1 homolog 82.5e-3942.2Show/hide
Query:  DECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGI
        ++CL+ +  + IDTEFP  + ++ +++ D E Y D  F+V++ KLIQLG+T  +  G+IGG+WE NFSDF    DA +  +I FL +NGLD +K++++GI
Subjt:  DECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGI

Query:  PIASFTKKFLPIIQK-RDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNA
         I  F  +   +++K R    WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL   RLGLE L       R G  H+A
Subjt:  PIASFTKKFLPIIQK-RDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNA

Query:  GSDSLLTASAHFEMVKRF
        GS++ LTA    +++  F
Subjt:  GSDSLLTASAHFEMVKRF

Q9SHJ0 Probable CCR4-associated factor 1 homolog 17.0e-4238.82Show/hide
Query:  KPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSA
        +P  R+VW SN + E+ +  ECL+   ++  DTE+PG I ++  +S   E Y+    NV   KLIQ G T  N  G+IGG WE NFS+F    D  +  +
Subjt:  KPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSA

Query:  IPFLEKNGLDFKKLKKDGIPI--ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRL
        I FL ++GLD +K++ +G+ +    F  K + + + +    +VTF G YD  Y +  +     LPE+  EFA  VV   G V D K MA FCEGL +  L
Subjt:  IPFLEKNGLDFKKLKKDGIPI--ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRL

Query:  GLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKS
        GL +L ++L   R G  H+AGSDSL+TA   F  +K     S    G +YG  KS
Subjt:  GLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKS

Q9SKZ2 Probable CCR4-associated factor 1 homolog 75.0e-3234.36Show/hide
Query:  IRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEI---YKDFCFNVNQMKLIQLGITASNDLGQIGGS--------WEFNFSDFDFQ
        IR+VW  N  SE+    E +     + +DTEFPG I+  P  +        Y+    NVN +K+IQLG+T S++ G +           W+FNF +FD +
Subjt:  IRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEI---YKDFCFNVNQMKLIQLGITASNDLGQIGGS--------WEFNFSDFDFQ

Query:  VDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPI-IQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCE
         D ++  +I  L ++G+DF K  + GI    F +  +   I   +   WVTFH  YD GYL+K +     LPE+   F  ++      V D+KH+ +FC 
Subjt:  VDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPI-IQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCE

Query:  GLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTS-EVCNGFLYG
         L     GL +L ++L+ +R G+ H AGSDSLLT+    ++ + F + S E  +G LYG
Subjt:  GLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTS-EVCNGFLYG

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.0e-4338.82Show/hide
Query:  KPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSA
        +P  R+VW SN + E+ +  ECL+   ++  DTE+PG I ++  +S   E Y+    NV   KLIQ G T  N  G+IGG WE NFS+F    D  +  +
Subjt:  KPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSA

Query:  IPFLEKNGLDFKKLKKDGIPI--ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRL
        I FL ++GLD +K++ +G+ +    F  K + + + +    +VTF G YD  Y +  +     LPE+  EFA  VV   G V D K MA FCEGL +  L
Subjt:  IPFLEKNGLDFKKLKKDGIPI--ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRL

Query:  GLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKS
        GL +L ++L   R G  H+AGSDSL+TA   F  +K     S    G +YG  KS
Subjt:  GLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKS

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-3739.13Show/hide
Query:  QVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLE
        +VW  N  +E+    +CL+    + IDTEFPG + ++P ++ D   Y+D  FNV+   LIQLG+T       I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLE

Query:  KNGLDFKKLKKDGIPIASFTKKFLPII-QKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVG-IVRDLKHMARFCEGLEDGRLGLERL
         NGLD  K++++GI I  F  +F  I+ +K    RWVTF G YD  YL+K +     LPE+ +EF   V   +G  V D+K MA  C GL   R GL+R+
Subjt:  KNGLDFKKLKKDGIPIASFTKKFLPII-QKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVG-IVRDLKHMARFCEGLEDGRLGLERL

Query:  GKILNKKRFGMKHNAGSDSLLTASAHFEMV
          +L  +R G  H+AGSDS LTA    +++
Subjt:  GKILNKKRFGMKHNAGSDSLLTASAHFEMV

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.6e-3334.36Show/hide
Query:  IRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEI---YKDFCFNVNQMKLIQLGITASNDLGQIGGS--------WEFNFSDFDFQ
        IR+VW  N  SE+    E +     + +DTEFPG I+  P  +        Y+    NVN +K+IQLG+T S++ G +           W+FNF +FD +
Subjt:  IRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEI---YKDFCFNVNQMKLIQLGITASNDLGQIGGS--------WEFNFSDFDFQ

Query:  VDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPI-IQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCE
         D ++  +I  L ++G+DF K  + GI    F +  +   I   +   WVTFH  YD GYL+K +     LPE+   F  ++      V D+KH+ +FC 
Subjt:  VDAHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPI-IQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCE

Query:  GLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTS-EVCNGFLYG
         L     GL +L ++L+ +R G+ H AGSDSLLT+    ++ + F + S E  +G LYG
Subjt:  GLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTS-EVCNGFLYG

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-4042.2Show/hide
Query:  DECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGI
        ++CL+ +  + IDTEFP  + ++ +++ D E Y D  F+V++ KLIQLG+T  +  G+IGG+WE NFSDF    DA +  +I FL +NGLD +K++++GI
Subjt:  DECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGI

Query:  PIASFTKKFLPIIQK-RDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNA
         I  F  +   +++K R    WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL   RLGLE L       R G  H+A
Subjt:  PIASFTKKFLPIIQK-RDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNA

Query:  GSDSLLTASAHFEMVKRF
        GS++ LTA    +++  F
Subjt:  GSDSLLTASAHFEMVKRF

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.6e-3337.16Show/hide
Query:  RQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSP-RNSIDVEIYKDFCFNVNQMKLIQLGITASN------DLG---QIGGSWEFNFSDFDFQVD
        R+VWA N  SE +   E +  +  +++DTEFPG I +S  R +   ++Y     NV+ + LIQ+G+T S+      DLG     G  WEFNF DFD   D
Subjt:  RQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSP-RNSIDVEIYKDFCFNVNQMKLIQLGITASN------DLG---QIGGSWEFNFSDFDFQVD

Query:  AHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLP--IIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVG-IVRDLKHMARFCE
        AH+P +I  L + G+DF++  +DG+    F +  +   ++   ++  WVTFH  YD GYL+K +     LP ++ EF  ++    G  V D+KHM +FCE
Subjt:  AHSPSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLP--IIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVG-IVRDLKHMARFCE

Query:  GLEDGRLGLERLGKILNKKR-FGMKHNAGSDSLLTASAHFEMVKRFRMTS--EVCNGFLYG
            G  GL+R+ + L   R  G  H AGSDSLLT  A   M   + +    E   G LYG
Subjt:  GLEDGRLGLERLGKILNKKR-FGMKHNAGSDSLLTASAHFEMVKRFRMTS--EVCNGFLYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAAAAAATCAATTTCGATCAAGAAGATCAAAAAAGCCTTTCATTCGGCAAGTTTGGGCTTCCAACTTCAATTCAGAAATTAAACAATTTGATGAATGTCTTCA
ATTCCACACAATTCTTACCATCGATACTGAATTCCCTGGCTTTATCATACAATCTCCACGGAATTCCATTGATGTAGAGATTTACAAAGATTTTTGTTTCAATGTAAACC
AAATGAAACTCATTCAACTTGGTATCACAGCTTCGAATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCTGATTTCGACTTCCAAGTCGATGCTCATTCT
CCTTCTGCCATTCCGTTTTTAGAAAAGAATGGGTTGGATTTTAAAAAACTTAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCTTACCTATCATTCAAAA
GCGTGACATCTTTCGATGGGTCACTTTCCATGGCTTGTACGACATAGGGTATCTCATCAAAGCAATGGGGTTAATCACAATGTTGCCAGAATCAATGGAAGAATTTGCAA
TGTTGGTGGTTAACGAAGTTGGAATTGTAAGAGATTTGAAGCATATGGCTAGATTCTGCGAAGGACTAGAAGATGGGAGACTTGGACTTGAAAGATTAGGAAAAATATTG
AATAAAAAACGATTCGGAATGAAACATAACGCTGGATCAGATAGTTTGCTTACAGCTTCTGCACATTTTGAGATGGTGAAAAGATTTAGAATGACTTCTGAAGTTTGTAA
TGGATTTTTGTATGGTTTTTCAAAATCACTTGAATCCATGAAGATGAAGATGAAGATAAAGATTTATCTTCACAACATTCTTAGATTAGGTCAAATTCCACATTTTCCTT
ATACACCTTCTTGTATTATTTCCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGAAAAAATCAATTTCGATCAAGAAGATCAAAAAAGCCTTTCATTCGGCAAGTTTGGGCTTCCAACTTCAATTCAGAAATTAAACAATTTGATGAATGTCTTCA
ATTCCACACAATTCTTACCATCGATACTGAATTCCCTGGCTTTATCATACAATCTCCACGGAATTCCATTGATGTAGAGATTTACAAAGATTTTTGTTTCAATGTAAACC
AAATGAAACTCATTCAACTTGGTATCACAGCTTCGAATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCTGATTTCGACTTCCAAGTCGATGCTCATTCT
CCTTCTGCCATTCCGTTTTTAGAAAAGAATGGGTTGGATTTTAAAAAACTTAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCTTACCTATCATTCAAAA
GCGTGACATCTTTCGATGGGTCACTTTCCATGGCTTGTACGACATAGGGTATCTCATCAAAGCAATGGGGTTAATCACAATGTTGCCAGAATCAATGGAAGAATTTGCAA
TGTTGGTGGTTAACGAAGTTGGAATTGTAAGAGATTTGAAGCATATGGCTAGATTCTGCGAAGGACTAGAAGATGGGAGACTTGGACTTGAAAGATTAGGAAAAATATTG
AATAAAAAACGATTCGGAATGAAACATAACGCTGGATCAGATAGTTTGCTTACAGCTTCTGCACATTTTGAGATGGTGAAAAGATTTAGAATGACTTCTGAAGTTTGTAA
TGGATTTTTGTATGGTTTTTCAAAATCACTTGAATCCATGAAGATGAAGATGAAGATAAAGATTTATCTTCACAACATTCTTAGATTAGGTCAAATTCCACATTTTCCTT
ATACACCTTCTTGTATTATTTCCCATTAA
Protein sequenceShow/hide protein sequence
MGGKNQFRSRRSKKPFIRQVWASNFNSEIKQFDECLQFHTILTIDTEFPGFIIQSPRNSIDVEIYKDFCFNVNQMKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHS
PSAIPFLEKNGLDFKKLKKDGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKIL
NKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSEVCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPHFPYTPSCIISH