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IVF0019803 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019803
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein ELF4-LIKE 4
Genome locationchr02:2327789..2328131
RNA-Seq ExpressionIVF0019803
SyntenyIVF0019803
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021961.1 Protein ELF4-LIKE 4 [Cucurbita argyrosperma subsp. argyrosperma]2.06e-3668.14Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRR---------------ISF--------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSG+GS+ QIDSKILQTF +               IS               +NVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRR---------------ISF--------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKAGQKRNRA
        KSDGKAGQKRNRA
Subjt:  KSDGKAGQKRNRA

XP_004144022.1 protein ELF4-LIKE 4 [Cucumis sativus]4.98e-3971.05Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRR---------------ISF--------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSSPQIDSKILQTF++               IS               +NVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRR---------------ISF--------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKAGQKRNRAA
        KSDGKAGQKRNRAA
Subjt:  KSDGKAGQKRNRAA

XP_022933909.1 protein ELF4-LIKE 4-like [Cucurbita moschata]1.94e-3668.14Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRR---------------ISF--------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSG+GS+ QIDSKILQTF +               IS               +NVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRR---------------ISF--------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKAGQKRNRA
        KSDGKAGQKRNRA
Subjt:  KSDGKAGQKRNRA

XP_022961237.1 protein ELF4-LIKE 4-like [Cucurbita moschata]2.36e-3769.3Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRR---------------ISF--------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSS QID+KILQTF++               IS               +NVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRR---------------ISF--------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKAGQKRNRAA
        KSDGKAGQKRNRAA
Subjt:  KSDGKAGQKRNRAA

XP_027332017.1 protein ELF4-LIKE 3-like [Abrus precatorius]1.76e-3262.61Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA
        MEGDTFSGLG+  QIDSKILQTF++ SF                              +NVGLIRELNNNIRRVVDLYADLS SFT+SMEVSSEGDSSGA
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA

Query:  LKSDGKAGQKRNRAA
        +KSDGKAG KR+R A
Subjt:  LKSDGKAGQKRNRAA

TrEMBL top hitse value%identityAlignment
A0A0A0M235 Elf4 domain-containing protein7.5e-2971.05Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRR---------------IS--------------FKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSSPQIDSKILQTF++               IS               +NVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRR---------------IS--------------FKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKAGQKRNRAA
        KSDGKAGQKRNRAA
Subjt:  KSDGKAGQKRNRAA

A0A1S3BQA6 protein ELF4-LIKE 47.5e-2971.05Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRR---------------IS--------------FKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSSPQIDSKILQTF++               IS               +NVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRR---------------IS--------------FKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKAGQKRNRAA
        KSDGKAGQKRNRAA
Subjt:  KSDGKAGQKRNRAA

A0A5D3CFE9 Protein ELF4-LIKE 4-like isoform X27.5e-2971.05Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRR---------------IS--------------FKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSSPQIDSKILQTF++               IS               +NVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRR---------------IS--------------FKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKAGQKRNRAA
        KSDGKAGQKRNRAA
Subjt:  KSDGKAGQKRNRAA

A0A6J1H9N1 protein ELF4-LIKE 4-like1.4e-2769.3Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRR---------------IS--------------FKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSS QID+KILQTF++               IS               +NVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRR---------------IS--------------FKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKAGQKRNRAA
        KSDGKAGQKRNRAA
Subjt:  KSDGKAGQKRNRAA

A0A6J1JGF0 protein ELF4-LIKE 4-like1.4e-2769.3Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRR---------------IS--------------FKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSS QID+KILQTF++               IS               +NVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRR---------------IS--------------FKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKAGQKRNRAA
        KSDGKAGQKRNRAA
Subjt:  KSDGKAGQKRNRAA

SwissProt top hitse value%identityAlignment
Q570U6 Protein ELF4-LIKE 43.7e-1748.25Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA
        MEGD  SG G    +D K+LQ+F++ SF                              +NVGLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG 
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA

Query:  LKSDGKAGQKRNRA
        LKSDGKA QKR R+
Subjt:  LKSDGKAGQKRNRA

Q8S8F5 Protein ELF4-LIKE 31.6e-1248.48Show/hide
Query:  MEGDTFSG-LGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS
        MEGDT S  +GS  Q+D KILQTF + SF                              +NVGLIRELNNN+RRV  LY DLS +F++SME SSEGDSS
Subjt:  MEGDTFSG-LGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS

Q94BS8 Protein ELF4-LIKE 29.2e-1647.83Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA
        MEGD +SG G   Q+D K+LQ F++ SF                              +NVGLIRELNNNIR V  LY DLS SF RS++ SSEG+S+G 
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA

Query:  LKSDGKA-GQKRNRA
        LKSDGKA  QKR R+
Subjt:  LKSDGKA-GQKRNRA

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 42.7e-1848.25Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA
        MEGD  SG G    +D K+LQ+F++ SF                              +NVGLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG 
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA

Query:  LKSDGKAGQKRNRA
        LKSDGKA QKR R+
Subjt:  LKSDGKAGQKRNRA

AT1G17455.2 ELF4-like 42.7e-1848.25Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA
        MEGD  SG G    +D K+LQ+F++ SF                              +NVGLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG 
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA

Query:  LKSDGKAGQKRNRA
        LKSDGKA QKR R+
Subjt:  LKSDGKAGQKRNRA

AT1G72630.1 ELF4-like 26.5e-1747.83Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA
        MEGD +SG G   Q+D K+LQ F++ SF                              +NVGLIRELNNNIR V  LY DLS SF RS++ SSEG+S+G 
Subjt:  MEGDTFSGLGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA

Query:  LKSDGKA-GQKRNRA
        LKSDGKA  QKR R+
Subjt:  LKSDGKA-GQKRNRA

AT2G06255.1 ELF4-like 31.2e-1348.48Show/hide
Query:  MEGDTFSG-LGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS
        MEGDT S  +GS  Q+D KILQTF + SF                              +NVGLIRELNNN+RRV  LY DLS +F++SME SSEGDSS
Subjt:  MEGDTFSG-LGSSPQIDSKILQTFRRISF------------------------------KNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTGATACATTTTCGGGGCTTGGGAGTAGTCCACAGATTGATAGCAAGATTTTACAAACATTCAGAAGAATTTCGTTCAAAAATGTGGGTCTGATCAGA
GAATTAAACAACAATATCAGGAGGGTTGTTGACTTATATGCTGATCTATCATGTTCATTCACCAGATCCATGGAAGTTTCTTCAGAAGGTGATTCAAGTGGCGCT
TTGAAATCAGATGGAAAAGCAGGTCAGAAGAGAAATAGGGCTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTGATACATTTTCGGGGCTTGGGAGTAGTCCACAGATTGATAGCAAGATTTTACAAACATTCAGAAGAATTTCGTTCAAAAATGTGGGTCTGATCAGA
GAATTAAACAACAATATCAGGAGGGTTGTTGACTTATATGCTGATCTATCATGTTCATTCACCAGATCCATGGAAGTTTCTTCAGAAGGTGATTCAAGTGGCGCT
TTGAAATCAGATGGAAAAGCAGGTCAGAAGAGAAATAGGGCTGCTTAA
Protein sequenceShow/hide protein sequence
MEGDTFSGLGSSPQIDSKILQTFRRISFKNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAA