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IVF0019857 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019857
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:20187825..20187977
RNA-Seq ExpressionIVF0019857
SyntenyIVF0019857
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00887.1 uncharacterized protein E5676_scaffold602G00460 [Cucumis melo var. makuwa]2.52e-0654.76Show/hide
Query:  RAGHERANVRNEDCEQTTNEHNSNRRDDGWTRWTTIVCAVTI
        + GH+RAN+RNED ++TTNEHNS+RR+ GW R TT      +
Subjt:  RAGHERANVRNEDCEQTTNEHNSNRRDDGWTRWTTIVCAVTI
TrEMBL top hitse value%identityAlignment
A0A5D3BNP4 CCHC-type domain-containing protein8.4e-0465.71Show/hide
Query:  RAGHERANVRNEDCEQTTNEHNSNRRDDGWTRWTT
        + GH+RAN+RNED ++TTNEHNS+RR+ GW R TT
Subjt:  RAGHERANVRNEDCEQTTNEHNSNRRDDGWTRWTT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGCGAGGGCTGGGCACGAACGCGCAAACGTGAGGAATGAGGACTGTGAACAGACAACAAACGAGCACAACAGTAACAGACGCGACGATGGCTGGACACGATGGAC
GACGATTGTGTGCGCGGTCACTATTCATCGAAGAAGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGCGAGGGCTGGGCACGAACGCGCAAACGTGAGGAATGAGGACTGTGAACAGACAACAAACGAGCACAACAGTAACAGACGCGACGATGGCTGGACACGATGGAC
GACGATTGTGTGCGCGGTCACTATTCATCGAAGAAGAGGTTGA
Protein sequenceShow/hide protein sequence
MVARAGHERANVRNEDCEQTTNEHNSNRRDDGWTRWTTIVCAVTIHRRRG