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IVF0019874 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019874
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S acidic ribosomal protein p2
Genome locationchr01:12544330..12545934
RNA-Seq ExpressionIVF0019874
SyntenyIVF0019874
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034662.1 60S acidic ribosomal protein P2-4-like [Cucumis melo var. makuwa]8.07e-2471.76Show/hide
Query:  AVGAEIDEERIELLLSNVK--------------LSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNAYLRF
        +VGAEIDEERIELLLSNVK              L+ VPSGGGAAVAV  GGGGGGAAA APA+AKKEEKVEEKEESDDV+ +LRF
Subjt:  AVGAEIDEERIELLLSNVK--------------LSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNAYLRF

TYK23152.1 60S acidic ribosomal protein p2 [Cucumis melo var. makuwa]7.25e-19100Show/hide
Query:  KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD
Subjt:  KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD

XP_004150488.1 60S acidic ribosomal protein P2-4 [Cucumis sativus]1.21e-2165.88Show/hide
Query:  AVGAEIDEERIELLLSNVK--------------LSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNAYLRF
        +VGAE+DEERI LLLSNVK              L+ VPSGGGAAVAV  GGGGGGAAA APA+AKKEEKVEEKEESDD   +  F
Subjt:  AVGAEIDEERIELLLSNVK--------------LSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNAYLRF

XP_008446770.1 PREDICTED: 60S acidic ribosomal protein P2-4-like [Cucumis melo]1.50e-2268.24Show/hide
Query:  AVGAEIDEERIELLLSNVK--------------LSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNAYLRF
        +VGAEIDEERIELLLSNVK              L+ VPSGGGAAVAV  GGGGGGAAA APA+AKKEEKVEEKEESDD   +  F
Subjt:  AVGAEIDEERIELLLSNVK--------------LSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNAYLRF

XP_022957078.1 60S acidic ribosomal protein P2-1-like [Cucurbita moschata]7.29e-1858.82Show/hide
Query:  AVGAEIDEERIELLLSNVK--------------LSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNAYLRF
        +VGAE+DE++IELL+S+VK              L+ VPSGGGAAVAV   GGGGGAAA A A++KKEEKVEEKEESDD   +  F
Subjt:  AVGAEIDEERIELLLSNVK--------------LSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNAYLRF

TrEMBL top hitse value%identityAlignment
A0A0A0KRE0 Uncharacterized protein2.4e-1570.51Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        +VGAE+DEERI LLLSNV              KL+ VPSGGGAAVAV  GGGGGGAAA APA+AKKEEKVEEKEESDD
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD

A0A1S3BFW0 60S acidic ribosomal protein P2-4-like4.8e-1673.08Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        +VGAEIDEERIELLLSNV              KL+ VPSGGGAAVAV  GGGGGGAAA APA+AKKEEKVEEKEESDD
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD

A0A5D3CBJ1 60S acidic ribosomal protein P2-4-like2.0e-1771.76Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNAYLRF
        +VGAEIDEERIELLLSNV              KL+ VPSGGGAAVAV  GGGGGGAAA APA+AKKEEKVEEKEESDDV ++LRF
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNAYLRF

A0A5D3DHV6 60S acidic ribosomal protein p25.0e-13100Show/hide
Query:  KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD
Subjt:  KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD

A0A6J1J1Z8 60S acidic ribosomal protein P2-4-like1.9e-1262.82Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        +VGAE+DE++IELL+S+V              KL+ VPSGGGAAVAV   GGGGGAAA A A++KKEEKVEEKEESDD
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD

SwissProt top hitse value%identityAlignment
P41099 60S acidic ribosomal protein P24.7e-0848.05Show/hide
Query:  AVGAEIDEERIELLLSNVK--------------LSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESD
        +VGA+ D+++IELLLS VK              L+ VPSGGG AVA   GGGGG A A+A  + KKEEK EE+ + +
Subjt:  AVGAEIDEERIELLLSNVK--------------LSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESD

P51407 60S acidic ribosomal protein P2-11.2e-0853.09Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV---TTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        +VGAE ++ +IELLL  V              KL+ VPSGGG  VAV   T+GGGGGG A +  A++KKEEK EEKEESDD
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV---TTGGGGGGAAASAPAKAKKEEKVEEKEESDD

Q9LUK2 60S acidic ribosomal protein P2-55.2e-0746.75Show/hide
Query:  AVGAEIDEERIELLLSNVKLSYVP-------------SGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        +VGAEID+E+I+L  S +K   V              S GG AVAV +GGGGG A A+ PA  + ++K EEKEES+D
Subjt:  AVGAEIDEERIELLLSNVKLSYVP-------------SGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD

Q9LXM8 60S acidic ribosomal protein P2-43.6e-0853.85Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        AVGA++D E IELLL  V              KL+ VPSGGG AV+     GGGGAAA A    KKE K EEKEESDD
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDD

Q9SLF7 60S acidic ribosomal protein P2-27.2e-0955Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV--TTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        +VGAE ++ +IELLL  V              KL+ VPSGGG  VAV   T GGGGG  ASA A++KKEEK EEKEESDD
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV--TTGGGGGGAAASAPAKAKKEEKVEEKEESDD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family5.1e-1055Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV--TTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        +VGAE ++ +IELLL  V              KL+ VPSGGG  VAV   T GGGGG  ASA A++KKEEK EEKEESDD
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV--TTGGGGGGAAASAPAKAKKEEKVEEKEESDD

AT2G27710.2 60S acidic ribosomal protein family5.1e-1055Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV--TTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        +VGAE ++ +IELLL  V              KL+ VPSGGG  VAV   T GGGGG  ASA A++KKEEK EEKEESDD
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV--TTGGGGGGAAASAPAKAKKEEKVEEKEESDD

AT2G27710.3 60S acidic ribosomal protein family5.1e-1055Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV--TTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        +VGAE ++ +IELLL  V              KL+ VPSGGG  VAV   T GGGGG  ASA A++KKEEK EEKEESDD
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV--TTGGGGGGAAASAPAKAKKEEKVEEKEESDD

AT2G27720.1 60S acidic ribosomal protein family8.7e-1053.09Show/hide
Query:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV---TTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        +VGAE ++ +IELLL  V              KL+ VPSGGG  VAV   T+GGGGGG A +  A++KKEEK EEKEESDD
Subjt:  AVGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV---TTGGGGGGAAASAPAKAKKEEKVEEKEESDD

AT2G27720.3 60S acidic ribosomal protein family1.1e-0953.75Show/hide
Query:  VGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV---TTGGGGGGAAASAPAKAKKEEKVEEKEESDD
        VGAE ++ +IELLL  V              KL+ VPSGGG  VAV   T+GGGGGG A +  A++KKEEK EEKEESDD
Subjt:  VGAEIDEERIELLLSNV--------------KLSYVPSGGGAAVAV---TTGGGGGGAAASAPAKAKKEEKVEEKEESDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCACAAACCCCTTCCCTTTCACTCCGATCTCCACGAAAAAGAAATCCCAAAACTCTCGGTTCCTCTCCATCTGCTCTCAAATGTGTTGAAAGGGGTCATAATTT
TTCTTTCTCAAACCATTTTGCAGTTGGAGCTGAAATTGACGAGGAAAGAATTGAGCTTCTACTCTCTAATGTTAAGCTATCATATGTTCCTTCTGGTGGAGGTGCTGCTG
TGGCAGTTACTACCGGAGGAGGTGGTGGCGGTGCAGCTGCCTCTGCTCCAGCTAAAGCAAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGACGATGTAAACGCT
TACCTTAGATTTGGTTTTTGTTTCTTTGCTTGGTGGCATTGCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCACAAACCCCTTCCCTTTCACTCCGATCTCCACGAAAAAGAAATCCCAAAACTCTCGGTTCCTCTCCATCTGCTCTCAAATGTGTTGAAAGGGGTCATAATTT
TTCTTTCTCAAACCATTTTGCAGTTGGAGCTGAAATTGACGAGGAAAGAATTGAGCTTCTACTCTCTAATGTTAAGCTATCATATGTTCCTTCTGGTGGAGGTGCTGCTG
TGGCAGTTACTACCGGAGGAGGTGGTGGCGGTGCAGCTGCCTCTGCTCCAGCTAAAGCAAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGACGATGTAAACGCT
TACCTTAGATTTGGTTTTTGTTTCTTTGCTTGGTGGCATTGCAAGTAG
Protein sequenceShow/hide protein sequence
MLPQTPSLSLRSPRKRNPKTLGSSPSALKCVERGHNFSFSNHFAVGAEIDEERIELLLSNVKLSYVPSGGGAAVAVTTGGGGGGAAASAPAKAKKEEKVEEKEESDDVNA
YLRFGFCFFAWWHCK