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IVF0019905 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019905
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationtig00000607_ERROPOS641385+:239453..239961
RNA-Seq ExpressionIVF0019905
SyntenyIVF0019905
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.34e-3585.33Show/hide
Query:  LRLMGG-ISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCEGTTRQYDN
        +RLMGG I+YSPLL+LR+SWSKQ   VVCGLEDWEFSYESNIANNKIHEAVEAWKFVKK+KSL+HCEGTT QYDN
Subjt:  LRLMGG-ISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCEGTTRQYDN

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]9.06e-3485.71Show/hide
Query:  GGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCEGTTRQYDN
        GGI+YSPLL+LR+SWSKQ   VVCGLEDWEFSYESNIAN+KIHEAVEAWKFVKK+KSL+HCEGTT QYDN
Subjt:  GGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCEGTTRQYDN

KGN51408.1 hypothetical protein Csa_007736 [Cucumis sativus]7.35e-3957.94Show/hide
Query:  EVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCE
        E++WR+ W+P SPLTYRCG+L FISLL  LWG       GI+YSPLL+L ++WSKQ  SV+ GLEDW+FSYE++    K+ E +E WK V+++KSL+HC+
Subjt:  EVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCE

Query:  GTTRQYD
        GTT QYD
Subjt:  GTTRQYD

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.06e-5678.81Show/hide
Query:  MQFFTHLTTVEVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFV
        MQFF+HLTT++ IWRAPWM TSPLT+RCGKLA I LL  LWG      GGI+YSPLL+LR+SWSKQ   VVCGLEDWEFSYESNIANNKIHEAVEAWKFV
Subjt:  MQFFTHLTTVEVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFV

Query:  KKIKSLQHCEGTTRQYDN
        KK+KSL+HCEGTT QYDN
Subjt:  KKIKSLQHCEGTTRQYDN

XP_031739496.1 uncharacterized protein LOC116403043 [Cucumis sativus]6.31e-2141.03Show/hide
Query:  MQFFTHLTTVEVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFV
        + FF+ L++ +VIW+A WMP   + YRCG    + LL   WG       G++Y+PLL+LR+ W KQ +     L+D +F+Y+      K H AV AWK V
Subjt:  MQFFTHLTTVEVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFV

Query:  KKIKSLQHCEGTTRQYD
        +KIK   H EG T  Y+
Subjt:  KKIKSLQHCEGTTRQYD

TrEMBL top hitse value%identityAlignment
A0A0A0KP72 Uncharacterized protein2.1e-2957.94Show/hide
Query:  EVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCE
        E++WR+ W+P SPLTYRCG+L FISLL  LW       GGI+YSPLL+L ++WSKQ  SV+ GLEDW+FSYE++    K+ E +E WK V+++KSL+HC+
Subjt:  EVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCE

Query:  GTTRQYD
        GTT QYD
Subjt:  GTTRQYD

A0A5A7SNY0 Glial fibrillary acidic protein-like2.8e-2985.33Show/hide
Query:  LRLM-GGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCEGTTRQYDN
        +RLM GGI+YSPLL+LR+SWSKQ   VVCGLEDWEFSYESNIANNKIHEAVEAWKFVKK+KSL+HCEGTT QYDN
Subjt:  LRLM-GGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCEGTTRQYDN

A0A5A7SUT0 Reverse transcriptase2.3e-2885.71Show/hide
Query:  GGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCEGTTRQYDN
        GGI+YSPLL+LR+SWSKQ   VVCGLEDWEFSYESNIAN+KIHEAVEAWKFVKK+KSL+HCEGTT QYDN
Subjt:  GGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCEGTTRQYDN

A0A5A7T5S7 Girdin-like2.0e-1640.17Show/hide
Query:  MQFFTHLTTVEVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFV
        + FF  LT+  VIW+A WMP   + YRCG    + LL   W       GG++Y+PLL+LR+ W KQ +     L++ +FSY+      K  +AV AWK +
Subjt:  MQFFTHLTTVEVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFV

Query:  KKIKSLQHCEGTTRQYD
        +KIK   H EG T  Y+
Subjt:  KKIKSLQHCEGTTRQYD

A0A5D3D0S2 Glial fibrillary acidic protein-like6.5e-4778.81Show/hide
Query:  MQFFTHLTTVEVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFV
        MQFF+HLTT++ IWRAPWM TSPLT+RCGKLA I LL  LWG      GGI+YSPLL+LR+SWSKQ   VVCGLEDWEFSYESNIANNKIHEAVEAWKFV
Subjt:  MQFFTHLTTVEVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFV

Query:  KKIKSLQHCEGTTRQYDN
        KK+KSL+HCEGTT QYDN
Subjt:  KKIKSLQHCEGTTRQYDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTTTTCACCCATTTAACGACAGTAGAGGTAATTTGGAGAGCTCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGAAAATTGGCTTTTATCTCACTATT
AGATAGCTTATGGGGGGCATTGCTTAGGCTTATGGGGGGCATTTCTTATTCTCCTCTTTTGATACTACGTAAATCCTGGTCAAAACAAATTGTATCAGTTGTATGTGGGC
TAGAAGATTGGGAATTCTCGTATGAGTCCAACATAGCAAATAATAAAATTCATGAAGCAGTCGAGGCATGGAAATTTGTAAAGAAGATAAAGAGTTTGCAACATTGTGAG
GGTACTACAAGACAGTATGATAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTTTTCACCCATTTAACGACAGTAGAGGTAATTTGGAGAGCTCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGAAAATTGGCTTTTATCTCACTATT
AGATAGCTTATGGGGGGCATTGCTTAGGCTTATGGGGGGCATTTCTTATTCTCCTCTTTTGATACTACGTAAATCCTGGTCAAAACAAATTGTATCAGTTGTATGTGGGC
TAGAAGATTGGGAATTCTCGTATGAGTCCAACATAGCAAATAATAAAATTCATGAAGCAGTCGAGGCATGGAAATTTGTAAAGAAGATAAAGAGTTTGCAACATTGTGAG
GGTACTACAAGACAGTATGATAATTAG
Protein sequenceShow/hide protein sequence
MQFFTHLTTVEVIWRAPWMPTSPLTYRCGKLAFISLLDSLWGALLRLMGGISYSPLLILRKSWSKQIVSVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKIKSLQHCE
GTTRQYDN