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IVF0019921 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019921
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionsmall EDRK-rich factor 2
Genome locationchr05:7960516..7961557
RNA-Seq ExpressionIVF0019921
SyntenyIVF0019921
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR040211 - Small EDRK-rich factor 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033303.1 small EDRK-rich factor 2 [Cucumis melo var. makuwa]5.47e-30100Show/hide
Query:  RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
        RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
Subjt:  RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
TYK21602.1 small EDRK-rich factor 2 [Cucumis melo var. makuwa]5.79e-30100Show/hide
Query:  RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
        RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
Subjt:  RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
XP_004138960.1 small EDRK-rich factor 2 [Cucumis sativus]3.05e-2994.12Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
        MTRGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGK STKK
Subjt:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
XP_008457241.1 PREDICTED: small EDRK-rich factor 2 [Cucumis melo]5.47e-32100Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
        MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
Subjt:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
XP_038876165.1 small EDRK-rich factor 2 [Benincasa hispida]3.71e-3095.59Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
        MTRGNQREKDRER+QARN GKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGK+STKK
Subjt:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
TrEMBL top hitse value%identityAlignment
A0A0A0LHU5 4F5 domain-containing protein2.1e-2194.12Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
        MTRGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGK STKK
Subjt:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
A0A1S3C551 small EDRK-rich factor 21.7e-23100Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
        MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
Subjt:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
A0A5A7SS85 Small EDRK-rich factor 24.2e-22100Show/hide
Query:  RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
        RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
Subjt:  RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
A0A5D3DDD9 Small EDRK-rich factor 24.2e-22100Show/hide
Query:  RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
        RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
Subjt:  RGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
A0A6J1KZW7 small EDRK-rich factor 2-like6.0e-2194.12Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
        MTRGNQREKDRERAQAR GGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAAS GNSSGGK+S KK
Subjt:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24100.1 Uncharacterised protein family SERF2.8e-1882.26Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGG
        MTRG+QRE+DRERA AR GGKGK KDDGLTPEQRRERDAKALQEK AKKAAQAA+  +S GG
Subjt:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGG
AT4G13615.1 Uncharacterised protein family SERF4.0e-1775.71Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQA--ASGGNSSGGKASTKK
        MTRG+QRE+DRERA AR GGKGK  DDGLTPEQRRERD KALQEKAAKKAAQA  AS G ++GGK +  K
Subjt:  MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQA--ASGGNSSGGKASTKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGTGGAAACCAGAGGGAGAAAGACCGAGAAAGGGCTCAGGCTCGCAACGGTGGCAAGGGTAAAACCAAAGACGATGGTTTGACTCCCGAGCAGCGCCGTGAAAG
AGATGCTAAGGCGCTGCAAGAAAAAGCCGCGAAGAAGGCGGCTCAGGCGGCATCAGGAGGTAATTCATCCGGAGGTAAAGCTAGCACTAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
CACGAAACTAAAACCAAAAAAATAAAAAAGGAAATAGAATTTATTCTAAAAATTTTAGGTTAATTTTTGTTTTTTTTCTAAAAAGGAAACAAATGAATAAAAGAGAATAG
GAATACAAGTTGGGGCACTCACTATATAAAGAATCTCCGATTCCCCTGTTCTTTCGATTACCTTTGGTTGACTCTCTGTTTTTAGAGATTGGAATTCTTCGTTTCTTCGG
CTAAGTCTCCACCCCAATCCTCCAATTCTACATCTTTCTTCACCACCCACTTCATTAATCTCCCTCCAATGACTCGTGGAAACCAGAGGGAGAAAGACCGAGAAAGGGCT
CAGGCTCGCAACGGTGGCAAGGGTAAAACCAAAGACGATGGTTTGACTCCCGAGCAGCGCCGTGAAAGAGATGCTAAGGCGCTGCAAGAAAAAGCCGCGAAGAAGGCGGC
TCAGGCGGCATCAGGAGGTAATTCATCCGGAGGTAAAGCTAGCACTAAGAAGTAAAATGGTCCTGGGTTTAGAATCATGGATTATGTTGATTTTTCTTAGCTTTGTTCTT
GTTGGAACGCCGAGATCTCGTGGTTCTTAGACTGTTTGATATTGGAGGAGTAACCTTCATATGTTTCAGTAATGTGAATTGATATATGTATTATGCTGTCAACGTTCATT
GTTGATTATTGTTTTTCATCATCTTAGTACTCTTGATCTTTACTTCTGTTGAGGTAACTATGCTGTCAATTGCGGATTTTGTTGAGATTGGATCCTAATGAAAAATTCTT
GTTCATATGTTATGATA
Protein sequenceShow/hide protein sequence
MTRGNQREKDRERAQARNGGKGKTKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKASTKK