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IVF0019923 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019923
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic
Genome locationchr11:4406654..4408264
RNA-Seq ExpressionIVF0019923
SyntenyIVF0019923
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153120.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucumis sativus]5.07e-6894.44Show/hide
Query:  MAATSTSTSINIFPFPSYQIVRSKTKSSPN-ITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGL
        MAATSTS  INIFPFPSYQI RSK KSSPN I VPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGL
Subjt:  MAATSTSTSINIFPFPSYQIVRSKTKSSPN-ITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGL

Query:  TPEQRGER
        TPEQRGER
Subjt:  TPEQRGER

XP_008459263.1 PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic [Cucumis melo]1.75e-75100Show/hide
Query:  MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT
        MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT
Subjt:  MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT

Query:  PEQRGER
        PEQRGER
Subjt:  PEQRGER

XP_022963874.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita moschata]6.99e-4767.89Show/hide
Query:  AATSTSTSINIFPFPSYQIV---RSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG
        + + ++ S + FPFP +      ++K +S P+  +PFAA P  + LPKRCQ CGGKGAIDCPGCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGG
Subjt:  AATSTSTSINIFPFPSYQIV---RSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG

Query:  LTPEQRGER
        LTPEQRGER
Subjt:  LTPEQRGER

XP_023521952.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like [Cucurbita pepo subsp. pepo]4.92e-4774.49Show/hide
Query:  FPFPSYQIV---RSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER
        FPFP +      ++K++S P+  +PFAA P  + LPKRCQ CGGKGAIDCPGCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGGLTPEQRGER
Subjt:  FPFPSYQIV---RSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER

XP_038901776.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X1 [Benincasa hispida]2.92e-5175.68Show/hide
Query:  ATSTSTSINIFPFPSYQIVRS------KTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGK
        A + ++S NIFPF  Y++VRS      KTKSS NI++  AA   S LLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCF+CQGFGLKSCP+CGK
Subjt:  ATSTSTSINIFPFPSYQIVRS------KTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGK

Query:  GGLTPEQRGER
        GGLTPEQRGER
Subjt:  GGLTPEQRGER

TrEMBL top hitse value%identityAlignment
A0A0A0LIM5 Uncharacterized protein4.0e-5195.19Show/hide
Query:  STSTSINIFPFPSYQIVRSKTKSSPN-ITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ
        +TSTSINIFPFPSYQI RSK KSSPN I VPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ
Subjt:  STSTSINIFPFPSYQIVRSKTKSSPN-ITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ

Query:  RGER
        RGER
Subjt:  RGER

A0A1S3C9W1 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic8.2e-57100Show/hide
Query:  MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT
        MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT
Subjt:  MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT

Query:  PEQRGER
        PEQRGER
Subjt:  PEQRGER

A0A6J1DHW0 uncharacterized protein LOC1110202036.4e-3366.36Show/hide
Query:  STSTSINIFPF-------PSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKG
        S+ T   IFPF       P   ++    K      + F A  T + LPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCP+CG G
Subjt:  STSTSINIFPF-------PSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKG

Query:  GLTPEQRGER
        GLTPEQRGER
Subjt:  GLTPEQRGER

A0A6J1HLG5 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic4.0e-3567.89Show/hide
Query:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG
        + + ++ S + FPFP +    + ++K +S P+  +PFAA P  + LPKRCQ CGGKGAIDCPGCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGG
Subjt:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG

Query:  LTPEQRGER
        LTPEQRGER
Subjt:  LTPEQRGER

A0A6J1JSI3 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic5.7e-3466.97Show/hide
Query:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG
        + + ++ S   FPFP +    + ++K++S P+  +PFAA P  + LPKRCQ CGGKGAIDC GCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGG
Subjt:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG

Query:  LTPEQRGER
        LTPEQRGER
Subjt:  LTPEQRGER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22630.1 unknown protein5.9e-3185.48Show/hide
Query:  KRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER
        K C+ CG KGAI+CPGCKGTGKNKKNGN+FERWKCF+CQGFG+KSCP+CGKGGLTPEQRGER
Subjt:  KRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTACCTCTACCTCTACCTCTATCAATATCTTCCCATTTCCCTCCTATCAAATTGTTAGAAGTAAAACAAAATCGTCACCCAACATTACTGTTCCTTTTGCTGC
ACTGCCAACATCTAATTTGCTGCCCAAAAGATGCCAGAAGTGTGGAGGTAAAGGGGCCATTGATTGTCCTGGATGTAAGGGAACGGGAAAGAATAAGAAAAACGGAAACA
TCTTCGAGCGTTGGAAATGTTTTGAATGTCAAGGATTTGGATTGAAGAGTTGTCCTCAATGTGGAAAAGGAGGTCTCACTCCAGAACAAAGGGGAGAAAGATAA
mRNA sequenceShow/hide mRNA sequence
AAAAGTATTAGCCAAAAGGGCACACACAAGATTAACTGAAAATGGCTGCTACCTCTACCTCTACCTCTATCAATATCTTCCCATTTCCCTCCTATCAAATTGTTAGAAGT
AAAACAAAATCGTCACCCAACATTACTGTTCCTTTTGCTGCACTGCCAACATCTAATTTGCTGCCCAAAAGATGCCAGAAGTGTGGAGGTAAAGGGGCCATTGATTGTCC
TGGATGTAAGGGAACGGGAAAGAATAAGAAAAACGGAAACATCTTCGAGCGTTGGAAATGTTTTGAATGTCAAGGATTTGGATTGAAGAGTTGTCCTCAATGTGGAAAAG
GAGGTCTCACTCCAGAACAAAGGGGAGAAAGATAAATGCATACAACAACAGCTTCTTTATAATAAACCCTTTATATATCTATACATATACTTTGAATTTTGTATTTTTTC
CTGATGTAATCATGTATCTCACAAGGTTTCTAATTTATATTACATTTTTGTA
Protein sequenceShow/hide protein sequence
MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER