CuGenDBv2

Gene ID	IVF0019926
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Thylakoid soluble phosphoprotein TSP9
Genome location	chr11:19605620..19605909
RNA-Seq Expression	IVF0019926
Synteny	IVF0019926
Gene Ontology terms	NA
InterPro domains	IPR021584 - Thylakoid soluble phosphoprotein TSP9 IPR037244 - Thylakoid soluble phosphoprotein TSP9 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7010512.1 hypothetical protein SDJN02_27306, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.60e-36

78.49

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTG----------TKNGGVFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSL +DQLLETDPVLQKVEGKD  SG  +G           KNGG FGGLFAK+D
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTG----------TKNGGVFGGLFAKKD

XP_004143212.1 uncharacterized protein LOC101205268 [Cucumis sativus]

9.97e-42

81.44

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT--------------KNGGVFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKD  SGNGTG+              KNGG FGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT--------------KNGGVFGGLFAKKD

XP_008464052.1 PREDICTED: uncharacterized protein LOC103502033 [Cucumis melo]

3.00e-45

86.46

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT-------------KNGGVFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT             KNGGVFGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT-------------KNGGVFGGLFAKKD

XP_023532336.1 uncharacterized protein LOC111794525 [Cucurbita pepo subsp. pepo]

1.61e-33

70.53

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGTKNG------------GVFGGLFAKKD
        MASL  AFSPAAGRVFAATAAKGAGESKKEKG+LDWI+G + KDQLLETDPVLQKVEGK+G + NG   + G            GVFGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGTKNG------------GVFGGLFAKKD

XP_038901860.1 uncharacterized protein LOC120088545 [Benincasa hispida]

1.48e-36

77.32

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT--------------KNGGVFGGLFAKKD
        MASLPIAFSPAA RVFAATAAKGAGESKKE+GLLDWIIGSLNKDQLLETDPVLQKVEGK   +GNG+GT              KNGG FGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT--------------KNGGVFGGLFAKKD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KC59 Uncharacterized protein

3.5e-31

81.44

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT--------------KNGGVFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKD  SGNGTG+              KNGG FGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT--------------KNGGVFGGLFAKKD

A0A1S3CKK5 uncharacterized protein LOC103502033

7.6e-34

86.46

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT-------------KNGGVFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT             KNGGVFGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT-------------KNGGVFGGLFAKKD

A0A5A7V5S9 Uncharacterized protein

7.6e-34

86.46

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT-------------KNGGVFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT             KNGGVFGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGT-------------KNGGVFGGLFAKKD

A0A6J1G777 uncharacterized protein LOC111451452

1.9e-24

69.47

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGTKNG------------GVFGGLFAKKD
        MASL  AFSPAAGRVFAATAAKGAGE KKEKG+LDWI+G + KDQLLETDPVLQKVEGK+G + NG   + G            GVFGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGTKNG------------GVFGGLFAKKD

A0A6J1L2X7 uncharacterized protein LOC111499927

1.9e-24

69.47

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGTKNG------------GVFGGLFAKKD
        MASL  AFSPAAGRVFAATAAKGAGE KKEKG+LDWI+G + KDQLLETDPVLQKVEGK+G + NG   + G            GVFGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGTKNG------------GVFGGLFAKKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G47070.1 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

9.9e-10

43.24

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNK-DQLLETDPVLQKVEGKDGTSGNGTGTKNGG
        ++SL ++F+PA  RV+A +   G+G  K+EK  +D+++G + K DQ  ET+P+L+KV+ K+GT+  G GT  GG
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNK-DQLLETDPVLQKVEGKDGTSGNGTGTKNGG

Sequences

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CDS sequence

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ATGGCCTCTCTTCCAATTGCATTCTCTCCCGCCGCCGGACGCGTATTCGCAGCCACCGCGGCCAAAGGCGCCGGCGAAAGCAAGAAAGAAAAGGGCCTTCTTGATTGGAT
CATCGGCAGCTTGAATAAGGATCAGCTTCTTGAAACCGACCCTGTTCTTCAAAAAGTCGAAGGCAAGGACGGTACCTCCGGTAACGGCACCGGCACCAAGAACGGCGGCG
TCTTTGGTGGTCTCTTTGCCAAGAAAGACTGA

mRNA sequence

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Protein sequence

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MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDGTSGNGTGTKNGGVFGGLFAKKD

IVF0019926 (gene) of Melon (IVF77) v1 genome