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IVF0019941 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019941
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLate embryogenesis abundant protein D-29-like
Genome locationchr07:20488171..20488467
RNA-Seq ExpressionIVF0019941
SyntenyIVF0019941
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044796.1 late embryogenesis abundant protein D-29-like [Cucumis melo var. makuwa]2.28e-5698.95Show/hide
Query:  MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRRR
        MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTER SCVMDVFVELKWRKCLILRRR
Subjt:  MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRRR

TYK16668.1 late embryogenesis abundant protein D-29-like [Cucumis melo var. makuwa]5.27e-5697.92Show/hide
Query:  MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRRRN
        MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRR  
Subjt:  MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRRRN

XP_004146555.1 late embryogenesis abundant protein D-29 [Cucumis sativus]2.48e-1375.44Show/hide
Query:  PVTEKVKETLVSRKDKAA------KEKKNENYETAREMASKTVGEIGCRIREKTERL
        P  EKVKETLVS KDKAA      KEKKNEN ETAREMASKT GEIGCRIREK+  L
Subjt:  PVTEKVKETLVSRKDKAA------KEKKNENYETAREMASKTVGEIGCRIREKTERL

XP_008452083.1 PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]1.33e-1268.75Show/hide
Query:  KEGEQPQPVTEKVKETLVSRKDKAA------KEKKNENYETAREMASKTVGEIGCRIREKTERL
        K G+     TEKVKETLVS KDKAA      KEKK EN ETAREMASKT  EIGCRIREKT  L
Subjt:  KEGEQPQPVTEKVKETLVSRKDKAA------KEKKNENYETAREMASKTVGEIGCRIREKTERL

TrEMBL top hitse value%identityAlignment
A0A0A0KUJ5 Uncharacterized protein6.9e-1075.44Show/hide
Query:  PVTEKVKETLVSRKDK------AAKEKKNENYETAREMASKTVGEIGCRIREKTERL
        P  EKVKETLVS KDK      AAKEKKNEN ETAREMASKT GEIGCRIREK+  L
Subjt:  PVTEKVKETLVSRKDK------AAKEKKNENYETAREMASKTVGEIGCRIREKTERL

A0A1S3BT31 late embryogenesis abundant protein D-29-like4.5e-0968.75Show/hide
Query:  KEGEQPQPVTEKVKETLVSRKDK------AAKEKKNENYETAREMASKTVGEIGCRIREKTERL
        K G+     TEKVKETLVS KDK      AAKEKK EN ETAREMASKT  EIGCRIREKT  L
Subjt:  KEGEQPQPVTEKVKETLVSRKDK------AAKEKKNENYETAREMASKTVGEIGCRIREKTERL

A0A5A7TRN2 Late embryogenesis abundant protein D-29-like5.3e-4298.95Show/hide
Query:  MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRRR
        MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTER SCVMDVFVELKWRKCLILRRR
Subjt:  MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRRR

A0A5A7TSE6 Late embryogenesis abundant protein D-29-like4.5e-0968.75Show/hide
Query:  KEGEQPQPVTEKVKETLVSRKDK------AAKEKKNENYETAREMASKTVGEIGCRIREKTERL
        K G+     TEKVKETLVS KDK      AAKEKK EN ETAREMASKT  EIGCRIREKT  L
Subjt:  KEGEQPQPVTEKVKETLVSRKDK------AAKEKKNENYETAREMASKTVGEIGCRIREKTERL

A0A5D3CZE5 Late embryogenesis abundant protein D-29-like2.4e-42100Show/hide
Query:  MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRR
        MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRR
Subjt:  MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTAGAAATTAAAGATGTTTGGATTGTTGCTGTAAGAATCTTGAAGGAGGGGGAGCAACCTCAACCGGTGACGGAGAAGGTGAAAGAAACGCTGGTGAGCCGAAA
AGATAAGGCTGCGAAGGAGAAGAAGAATGAGAACTACGAAACGGCAAGAGAAATGGCGTCAAAGACAGTGGGGGAAATTGGGTGTAGGATTAGGGAGAAAACTGAGAGAC
TGAGTTGTGTAATGGACGTTTTTGTTGAGTTGAAGTGGAGAAAGTGTTTAATCTTAAGAAGACGTAATCAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCTTAGAAATTAAAGATGTTTGGATTGTTGCTGTAAGAATCTTGAAGGAGGGGGAGCAACCTCAACCGGTGACGGAGAAGGTGAAAGAAACGCTGGTGAGCCGAAA
AGATAAGGCTGCGAAGGAGAAGAAGAATGAGAACTACGAAACGGCAAGAGAAATGGCGTCAAAGACAGTGGGGGAAATTGGGTGTAGGATTAGGGAGAAAACTGAGAGAC
TGAGTTGTGTAATGGACGTTTTTGTTGAGTTGAAGTGGAGAAAGTGTTTAATCTTAAGAAGACGTAATCAAGTTTAG
Protein sequenceShow/hide protein sequence
MSLEIKDVWIVAVRILKEGEQPQPVTEKVKETLVSRKDKAAKEKKNENYETAREMASKTVGEIGCRIREKTERLSCVMDVFVELKWRKCLILRRRNQV