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IVF0019966 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019966
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr06:19838983..19839288
RNA-Seq ExpressionIVF0019966
SyntenyIVF0019966
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011658449.1 uncharacterized protein LOC105436008 [Cucumis sativus]9.45e-3972.28Show/hide
Query:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA
        MK+T+ I+EF GKIS   SKF+TL +ALEDSSLVKK LDS+P KY  IV +IEQF  L+TM FEE I  M VYEERT +LLGNNNNTDGQLLLTHAEWKA
Subjt:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA

Query:  R
        R
Subjt:  R

XP_031737549.1 uncharacterized protein LOC116402439 [Cucumis sativus]1.22e-3973.27Show/hide
Query:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA
        MK+T+ I+EF GKISG  SKF+TL +ALEDSSLVKK LDS+P KY PIV  IEQF  L+TM FEEAI  MK YEERT RL  NNNNTDGQLLLTH EWKA
Subjt:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA

Query:  R
        R
Subjt:  R

XP_031741744.1 uncharacterized protein LOC116403940 [Cucumis sativus]4.48e-3973.27Show/hide
Query:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA
        MK+T+ I+EF GKISG  SKF+TL +ALEDSSLVKK LDS+P KY P VA IEQF  L+TMSFEEAI  MK Y+ERT RL  NNNNTD QLLLTHAEWKA
Subjt:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA

Query:  R
        R
Subjt:  R

XP_031745069.1 uncharacterized protein LOC116405247 [Cucumis sativus]4.75e-4275.25Show/hide
Query:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA
        MK+T+MI+EF GKISG  SKF+TL +AL+DSSLVKK LDS+P KY PIVA IEQF  L+TM FEEAI  MK YEERT RL  NNNNTDGQLLLTHAEWKA
Subjt:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA

Query:  R
        R
Subjt:  R

XP_031745073.1 uncharacterized protein LOC116405251 [Cucumis sativus]6.31e-4075.25Show/hide
Query:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA
        MK+T+MI+EF GKISG  SKF+TL +AL+DSSLVKK LDS+P KY PIVA IEQF  L+TM FEEAI  MK YEERT RL  NNNNTDGQLLLTHAEWKA
Subjt:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A251T2S5 Putative EGF-like domain-containing protein1.9e-1546.53Show/hide
Query:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA
        MK+++ ++E+ GKISG  +KF  L   LED+++V+K L+S+P KY  IVA IEQ+  + TM FEEA+  +K YEER ++   +  N  GQLLLT  +W+ 
Subjt:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA

Query:  R
        R
Subjt:  R

A0A5K0VFR7 Uncharacterized protein (Fragment)9.6e-1542.16Show/hide
Query:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTV-RLLGNNNNTDGQLLLTHAEWK
        M++ + ++++ G+++G + +++ L   L D++LVKK  D++P ++  ++A IEQF  L TM FEEA+  +K YEER+  R  G   N D QLLLT AEW+
Subjt:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTV-RLLGNNNNTDGQLLLTHAEWK

Query:  AR
        AR
Subjt:  AR

A0A5N6NLN5 CCHC-type domain-containing protein2.8e-1443.56Show/hide
Query:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA
        MK+++ I+EF+GK+SG  +K  +L   LED  +V+K L+S+P K+  IVA IEQ+  ++ MS EEA+  +K YE+R +++L    N  G+LLLT  +W+ 
Subjt:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA

Query:  R
        R
Subjt:  R

B6TPM7 Retrotransposon protein3.3e-1544.12Show/hide
Query:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLL-GNNNNTDGQLLLTHAEWK
        M+  + ++++ GKISG  ++++ L   L+D+++VKK LD++P + FP+VA IEQF  ++TM FEEA+  +K ++ER+ R         D QLLLT AEWK
Subjt:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLL-GNNNNTDGQLLLTHAEWK

Query:  AR
        AR
Subjt:  AR

C6JSM1 CCHC-type domain-containing protein1.0e-1644.55Show/hide
Query:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA
        MK  + ++++ G+++G + ++  L  +LED++LVKK  D++P +Y  ++A IEQF  LQTM FE+A+  +K YEERT R +G   +  GQ+LLT AEW+A
Subjt:  MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKA

Query:  R
        R
Subjt:  R

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGACCAAGATGATCAATGAGTTCACAGGAAAAATTAGTGGTCCAACAAGCAAGTTCTCCACACTCAATATTGCACTTGAAGATTCATCATTGGTCAAGAAACC
CCTCGACTCCATCCCCTATAAATATTTTCCCATTGTCGCCAAAATCGAGCAATTCCTATATCTCCAAACCATGTCGTTTGAAGAAGCGATCAGAGCAATGAAGGTGTATG
AGGAACGGACAGTGCGACTCCTTGGAAACAACAACAACACTGATGGACAACTCCTACTTACTCATGCCGAGTGGAAAGCAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGACCAAGATGATCAATGAGTTCACAGGAAAAATTAGTGGTCCAACAAGCAAGTTCTCCACACTCAATATTGCACTTGAAGATTCATCATTGGTCAAGAAACC
CCTCGACTCCATCCCCTATAAATATTTTCCCATTGTCGCCAAAATCGAGCAATTCCTATATCTCCAAACCATGTCGTTTGAAGAAGCGATCAGAGCAATGAAGGTGTATG
AGGAACGGACAGTGCGACTCCTTGGAAACAACAACAACACTGATGGACAACTCCTACTTACTCATGCCGAGTGGAAAGCAAGATAA
Protein sequenceShow/hide protein sequence
MKKTKMINEFTGKISGPTSKFSTLNIALEDSSLVKKPLDSIPYKYFPIVAKIEQFLYLQTMSFEEAIRAMKVYEERTVRLLGNNNNTDGQLLLTHAEWKAR