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IVF0019973 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019973
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:7698418..7698585
RNA-Seq ExpressionIVF0019973
SyntenyIVF0019973
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038851.1 retrotransposon protein [Cucumis melo var. makuwa]1.26e-2994.55Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ RNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]2.64e-2994.55Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+DV+DEDEGDSTY TTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]2.26e-3096.36Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDD++DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]2.54e-2992.73Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCD+V+D+DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN 
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]5.32e-2992.73Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+DV+DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT+WQLRN+
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SZ61 Retrotransposon protein2.6e-2298.18Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDL ESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7TUU4 Retrotransposon protein2.0e-2298.18Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT+WQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7UG16 Retrotransposon protein8.9e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7V4C6 Retrotransposon protein2.0e-2298.18Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVED+DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7V4Q8 Retrotransposon protein2.6e-2296.36Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDD++DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA