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IVF0019988 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019988
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSHSP domain-containing protein
Genome locationchr05:22293459..22293790
RNA-Seq ExpressionIVF0019988
SyntenyIVF0019988
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056096.1 hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa]2.17e-5481.82Show/hide
Query:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR--------------------RIREIVNRMKFVEDVCPNIIFST
        MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR                    RIREIVNRMKFVEDVCPNIIFST
Subjt:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR--------------------RIREIVNRMKFVEDVCPNIIFST

Query:  QWGLPVLSYI
        QWGLPVLSYI
Subjt:  QWGLPVLSYI

KAE9446725.1 hypothetical protein C3L33_21367, partial [Rhododendron williamsianum]8.67e-0939.62Show/hide
Query:  LEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR----------------RIRE----IVNRMKFVEDVCPNIIFSTQWG
        +EI+ + G RW   YEKL  +G  + +       RRRW  KM  R  +G RL R                RI E    I+NRMK ++D+CP I+FS  WG
Subjt:  LEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR----------------RIRE----IVNRMKFVEDVCPNIIFSTQWG

Query:  LPVLSY
        LPVLS+
Subjt:  LPVLSY

KAF5946811.1 hypothetical protein HYC85_017039 [Camellia sinensis]1.14e-0939.45Show/hide
Query:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRRIR--------------------EIVNRMKFVEDVCPNIIFST
        MG  ++  +GGR W   Y++L S    N+R  V +  RRRW+ +M  + +KGFRL +  R                    E+VNRMK  +++CP IIFS 
Subjt:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRRIR--------------------EIVNRMKFVEDVCPNIIFST

Query:  QWGLPVLSY
        QWGLPVLS+
Subjt:  QWGLPVLSY

KAG6599155.1 Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia]3.93e-2356.48Show/hide
Query:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR-------------------RIREIVNRMKFVEDVCPNIIFSTQ
        MGLLE AGIGGRRW   YEKL+           ++  RRRW+KK LKRG KGFRLYR                   RIREIVNRMK VEDVC N+IF TQ
Subjt:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR-------------------RIREIVNRMKFVEDVCPNIIFSTQ

Query:  WGLPVLSY
        WGLP LSY
Subjt:  WGLPVLSY

KGN61039.1 hypothetical protein Csa_021124 [Cucumis sativus]6.36e-4471.82Show/hide
Query:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR--------------------RIREIVNRMKFVEDVCPNIIFST
        M LLEIAGIGGRRWECHYEKLNS GGSN    V++MRRRRW+KKMLKRGMKGFRLYR                    RIREIV+RMK VEDVCPNIIFST
Subjt:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR--------------------RIREIVNRMKFVEDVCPNIIFST

Query:  QWGLPVLSYI
        QWGLPVLSYI
Subjt:  QWGLPVLSYI

TrEMBL top hitse value%identityAlignment
A0A061F3B0 Uncharacterized protein7.3e-0637.37Show/hide
Query:  IGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRRIR------------------EIVNRMKFVEDVCPNIIFSTQWGLPVLSY
        +GG    C YEKL + G +          RRRW+KKM   G+KG RL R  +                  +I +R+K    +CPNIIF+T WGLP LS+
Subjt:  IGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRRIR------------------EIVNRMKFVEDVCPNIIFSTQWGLPVLSY

A0A0A0LJ29 Uncharacterized protein1.2e-3271.82Show/hide
Query:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLY--------------------RRIREIVNRMKFVEDVCPNIIFST
        M LLEIAGIGGRRWECHYEKLN SGGSN    V++MRRRRW+KKMLKRGMKGFRLY                    RRIREIV+RMK VEDVCPNIIFST
Subjt:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLY--------------------RRIREIVNRMKFVEDVCPNIIFST

Query:  QWGLPVLSYI
        QWGLPVLSYI
Subjt:  QWGLPVLSYI

A0A5D3BCS3 Uncharacterized protein7.0e-4181.82Show/hide
Query:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLY--------------------RRIREIVNRMKFVEDVCPNIIFST
        MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLY                    RRIREIVNRMKFVEDVCPNIIFST
Subjt:  MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLY--------------------RRIREIVNRMKFVEDVCPNIIFST

Query:  QWGLPVLSYI
        QWGLPVLSYI
Subjt:  QWGLPVLSYI

A0A6A4KLK9 SHSP domain-containing protein (Fragment)1.1e-0639.62Show/hide
Query:  LEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR----------------RIR----EIVNRMKFVEDVCPNIIFSTQWG
        +EI+ + G RW   YEKL  +G  + +       RRRW  KM  R  +G RL R                RI     EI+NRMK ++D+CP I+FS  WG
Subjt:  LEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYR----------------RIR----EIVNRMKFVEDVCPNIIFSTQWG

Query:  LPVLSY
        LPVLS+
Subjt:  LPVLSY

A0A7J7H3I9 Uncharacterized protein1.1e-0640.4Show/hide
Query:  GRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRRIR--------------------EIVNRMKFVEDVCPNIIFSTQWGLPVLSY
        G RW   Y++L     SN+R  V +  RRRW+ +M  + +KGFRL +  R                    E+VNRMK  +++CP IIFS QWGLPVLS+
Subjt:  GRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRRIR--------------------EIVNRMKFVEDVCPNIIFSTQWGLPVLSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATGAGAAGCTAAACAGTAGTGGAGGTAGTAATAACAGAGTAGTGGTTATAATAATGCG
GAGACGTCGATGGATTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGAAGAATAAGAGAGATTGTGAATAGAATGAAGTTTGTTGAAGATGTATGCC
CTAACATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTCTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATGAGAAGCTAAACAGTAGTGGAGGTAGTAATAACAGAGTAGTGGTTATAATAATGCG
GAGACGTCGATGGATTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGAAGAATAAGAGAGATTGTGAATAGAATGAAGTTTGTTGAAGATGTATGCC
CTAACATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATATGA
Protein sequenceShow/hide protein sequence
MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI