CuGenDBv2

Gene ID	IVF0019989
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag-pro-like protein
Genome location	chr03:6413052..6413606
RNA-Seq Expression	IVF0019989
Synteny	IVF0019989
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006310 - DNA recombination (biological process) GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process) GO:0003723 - RNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037620.1 Gag-pro-like protein [Cucumis melo var. makuwa]

5.15e-121

94.02

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Query:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
        MEEKDKDMDKMRQEI+NLGEQVSK LELLSMGKGKVAVD AQSSNPIQDTDDPIYP GFT YH+NVPQSQTTQHY+PTNPLYVVPPIVPG+EHLEAQAKI
Subjt:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
        QDMGQNENTPAKQKLDVLEERLRAIEG D YGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAA+INNDK
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

KAA0044913.1 uncharacterized protein E6C27_scaffold74G002080 [Cucumis melo var. makuwa]

8.01e-116

95.65

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Query:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
        MEEKDKDMDKMRQEI+NLGEQVSK LELLSMGKGKVAVD AQSSNPIQDTDD IYPPGFTPYH+NVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
        QDMGQNENTPAKQKLDVLEERLRAIEG D YGNIDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

KAA0066747.1 Gag-pro-like protein [Cucumis melo var. makuwa]

6.25e-117

91.85

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Query:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
        MEEKDKDMDKMRQEI+NLGEQVSK LELLSMGK  V VD AQSSNPIQ+TDDPIYPPGFTPYH+ VPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
        QDMG NENT AKQKLDVLEERLRAIEG D YGNID TQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

XP_008463191.1 PREDICTED: uncharacterized protein LOC103501400 [Cucumis melo]

2.70e-121

94.02

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Query:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
        MEEKDKDMDKMRQEISNLGEQVSK LELLSMGKGKVAVD AQ SNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHY+PTNPLYVVPPIVPG+EHLEAQAKI
Subjt:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
        QDMGQN+NT AKQKLD+LEERLRAIEG D YGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

XP_008465589.1 PREDICTED: uncharacterized protein LOC103503225 [Cucumis melo]

4.56e-119

95.11

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Query:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
        MEEKDKDMDKMRQEI+NLGEQVSK LELLSMGKGKVAVD AQSSNPIQDTDD IYPPGFTPYH+NVPQSQT QHYVPTNPLYVVPPIVPGIEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
        QDMGQNENTPAKQKLDVLEERLRAIEG D YGNIDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CIL9 uncharacterized protein LOC103501400

2.6e-95

94.02

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Query:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
        MEEKDKDMDKMRQEISNLGEQVSK LELLSMGKGKVAVD AQ SNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHY+PTNPLYVVPPIVPG+EHLEAQAKI
Subjt:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
        QDMGQN+NT AKQKLD+LEERLRAIEG D YGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

A0A1S3CQP2 uncharacterized protein LOC103503225

4.5e-95

95.11

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Query:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
        MEEKDKDMDKMRQEI+NLGEQVSK LELLSMGKGKVAVD AQSSNPIQDTDD IYPPGFTPYH+NVPQSQT QHYVPTNPLYVVPPIVPGIEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
        QDMGQNENTPAKQKLDVLEERLRAIEG D YGNIDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

A0A5A7T2M2 Gag-pro-like protein

1.3e-94

94.02

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Query:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
        MEEKDKDMDKMRQEI+NLGEQVSK LELLSMGKGKVAVD AQSSNPIQDTDDPIYP GFT YH+NVPQSQTTQHY+PTNPLYVVPPIVPG+EHLEAQAKI
Subjt:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
        QDMGQNENTPAKQKLDVLEERLRAIEG D YGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAA+INNDK
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

A0A5A7V8B6 Gag-pro-like protein

2.6e-95

94.02

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Query:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
        MEEKDKDMDKMRQEISNLGEQVSK LELLSMGKGKVAVD AQ SNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHY+PTNPLYVVPPIVPG+EHLEAQAKI
Subjt:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
        QDMGQN+NT AKQKLD+LEERLRAIEG D YGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

A0A5D3CXD6 Retrotrans_gag domain-containing protein

9.1e-96

95.65

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Query:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
        MEEKDKDMDKMRQEI+NLGEQVSK LELLSMGKGKVAVD AQSSNPIQDTDD IYPPGFTPYH+NVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
        QDMGQNENTPAKQKLDVLEERLRAIEG D YGNIDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGAAGAAAAAGATAAGGACATGGACAAAATGAGACAAGAGATTAGTAATCTTGGGGAACAAGTTTCTAAAACACTGGAATTGCTTTCAATGGGGAAAGGAAAAGTCGC
TGTAGATATAGCACAATCAAGCAATCCAATTCAAGACACAGATGATCCCATTTATCCTCCAGGATTCACTCCATACCACGTGAATGTTCCGCAGTCTCAAACCACTCAAC
ACTATGTTCCTACGAATCCGTTGTATGTTGTTCCACCCATTGTCCCAGGTATAGAACATTTGGAAGCTCAGGCTAAAATTCAAGACATGGGACAAAACGAGAACACTCCG
GCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGGTTGCGAGCAATTGAAGGGATTGATGCCTATGGAAATATAGATGCAACACAATTGTGCTTGGTGCCAGGCTTGATCAT
TCCAGCAAAGTTTAAAGTTCCTGAATTCGATAAATATGATGGATCAACGTGTCCAAGGAGTCATCTTATAATGTACTGCAGAAAGATGGCGGCGCATATTAATAATGATA
AATAG

mRNA sequence

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Protein sequence

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MEEKDKDMDKMRQEISNLGEQVSKTLELLSMGKGKVAVDIAQSSNPIQDTDDPIYPPGFTPYHVNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTP
AKQKLDVLEERLRAIEGIDAYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDK

IVF0019989 (gene) of Melon (IVF77) v1 genome