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IVF0019991 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019991
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein ROOT HAIR DEFECTIVE 3
Genome locationchr04:22802232..22803399
RNA-Seq ExpressionIVF0019991
SyntenyIVF0019991
Gene Ontology termsGO:0016320 - endoplasmic reticulum membrane fusion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR008803 - RHD3/Sey1
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR030386 - GB1/RHD3-type guanine nucleotide-binding (G) domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5466454.1 hypothetical protein F2P56_016377, partial [Juglans regia]5.19e-5684.26Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLN+LFGTNFRE+DAF+GRSQ TKGIWLARCA IEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

KAG5000672.1 hypothetical protein JHK87_021744 [Glycine soja]2.69e-5586.11Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARCADIEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

MCH81464.1 ROOT HAIR defective 3 GTP-binding family protein [Trifolium medium]7.70e-5883.33Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLNNLF TNFRE+DAFKGRSQ TKGIW+ARCA IEPCT++MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

PKI62324.1 hypothetical protein CRG98_017325 [Punica granatum]1.13e-5685.19Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLN+LFGTNFRE+DAFKGRSQ TKGIWLARCA IEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

XP_029129067.1 protein ROOT HAIR DEFECTIVE 3 homolog 1 [Cajanus cajan]2.57e-5684.26Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARC  IEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

TrEMBL top hitse value%identityAlignment
A0A1U8AA95 Protein ROOT HAIR DEFECTIVE 3 homolog1.2e-4585.19Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLNNLFGTNFRE+DAF+GRSQ TKGIWLARCADIEPCTL+MDLEGTDGRERGEDDTAF+KQS+LFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

A0A445JH49 Protein ROOT HAIR DEFECTIVE 3 homolog4.1e-4686.11Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARCADIEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

A0A445JH51 Protein ROOT HAIR DEFECTIVE 3 homolog4.1e-4686.11Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARCADIEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

A0A6J1D092 Protein ROOT HAIR DEFECTIVE 3 homolog1.6e-4586.11Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIWLARCA IEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

I1KUU5 Protein ROOT HAIR DEFECTIVE 3 homolog4.1e-4686.11Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARCADIEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

SwissProt top hitse value%identityAlignment
P93042 Protein ROOT HAIR DEFECTIVE 31.4e-4682.41Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLN+LFGTNFRE+DAF+GRSQ TKGIW+ARCA IEPCT++MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

Q0JLS6 Protein ROOT HAIR DEFECTIVE 31.7e-4480.56Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLN+LF TNFRE+DAFKGRSQ TKGIW+A+  +IEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

Q2QMH2 Protein ROOT HAIR DEFECTIVE 3 homolog 12.0e-4578.7Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLN LFGTNFRE+DAF+GRSQ TKGIW+ARC  +EPCT++MDLEGTDGRERGEDDTAF+KQS+LFALA+        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

Q9FKE9 Protein ROOT HAIR DEFECTIVE 3 homolog 23.5e-4276.85Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLN+LF T+FRE+DAF GRSQ TKGIW+ARC  IEP T+ MDLEGTDGRERGEDDT F+KQSALFA+AV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

Q9SSN0 Protein ROOT HAIR DEFECTIVE 3 homolog 11.0e-4683.33Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLN+LFGTNF E+DAFKGRSQ TKGIWLARCA IEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALA+        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

Arabidopsis top hitse value%identityAlignment
AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3)7.4e-4883.33Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLN+LFGTNF E+DAFKGRSQ TKGIWLARCA IEPCTL+MDLEGTDGRERGEDDTAF+KQSALFALA+        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

AT3G13870.1 Root hair defective 3 GTP-binding protein (RHD3)9.6e-4882.41Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLN+LFGTNFRE+DAF+GRSQ TKGIW+ARCA IEPCT++MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ

AT3G13870.2 Root hair defective 3 GTP-binding protein (RHD3)4.3e-3278.05Show/hide
Query:  KGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANKSFLKTVFQ
        +G SQ TKGIW+ARCA IEPCT++MDLEGTDGRERGEDDTAF+KQSALFALAV        WCHDIGREQAANK  LKTVFQ
Subjt:  KGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANKSFLKTVFQ

AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3)2.5e-4376.85Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK
        MGPQSSGKSTLLN+LF T+FRE+DAF GRSQ TKGIW+ARC  IEP T+ MDLEGTDGRERGEDDT F+KQSALFA+AV        WCHDIGREQAANK
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAV--------WCHDIGREQAANK

Query:  SFLKTVFQ
          LKTVFQ
Subjt:  SFLKTVFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTCAAAGTAGTGGGAAGAGTACACTACTAAATAATCTGTTTGGAACCAACTTCAGAGAGATAGATGCTTTTAAAGGGAGGTCGCAAAAAACTAAAGGTATATG
GTTGGCTAGATGCGCCGACATCGAGCCTTGTACACTTATGATGGATTTGGAAGGAACTGATGGAAGAGAGCGAGGAGAGGACGACACTGCATTTAAGAAGCAAAGTGCCC
TCTTTGCACTTGCCGTATGGTGTCACGATATTGGTCGTGAGCAGGCTGCAAATAAGTCTTTCCTCAAAACTGTATTTCAGGCATTCCCTTTAATCTGGTTGGGGGTCATG
GTGTATCTTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCTCAAAGTAGTGGGAAGAGTACACTACTAAATAATCTGTTTGGAACCAACTTCAGAGAGATAGATGCTTTTAAAGGGAGGTCGCAAAAAACTAAAGGTATATG
GTTGGCTAGATGCGCCGACATCGAGCCTTGTACACTTATGATGGATTTGGAAGGAACTGATGGAAGAGAGCGAGGAGAGGACGACACTGCATTTAAGAAGCAAAGTGCCC
TCTTTGCACTTGCCGTATGGTGTCACGATATTGGTCGTGAGCAGGCTGCAAATAAGTCTTTCCTCAAAACTGTATTTCAGGCATTCCCTTTAATCTGGTTGGGGGTCATG
GTGTATCTTTTATAG
Protein sequenceShow/hide protein sequence
MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEDDTAFKKQSALFALAVWCHDIGREQAANKSFLKTVFQAFPLIWLGVM
VYLL