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IVF0020019 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020019
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein ROOT HAIR DEFECTIVE 3-like
Genome locationchr01:13297058..13297326
RNA-Seq ExpressionIVF0020019
SyntenyIVF0020019
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033206.1 uncharacterized protein E6C27_scaffold1276G00570 [Cucumis melo var. makuwa]3.88e-1561.02Show/hide
Query:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE
        M L+KGKA DSQQCY  GEG  FNA EVD  +DD F+D+PA  IDDQ +D+E  T I+E
Subjt:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE

KAE8653658.1 hypothetical protein Csa_023635, partial [Cucumis sativus]2.83e-2374.58Show/hide
Query:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE
        MVL+K KA DSQQCYGGGEG  FNA EV+N++DD FMDVP P+IDDQHVD++TRTSI+E
Subjt:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE

TYK07506.1 uncharacterized protein E5676_scaffold1702G00230 [Cucumis melo var. makuwa]3.79e-1561.02Show/hide
Query:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE
        M L+KGKA DSQQCY  GEG  FNA EVD  +DD F+D+PA  IDDQ +D+E  T I+E
Subjt:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE

TYK23889.1 uncharacterized protein E5676_scaffold419G00680 [Cucumis melo var. makuwa]4.12e-1459.32Show/hide
Query:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE
        M L+KGKA D +QCYG GEG  FNA E +  +DD FM++PAP ID Q  +EE RTSI+E
Subjt:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE

XP_008450207.1 PREDICTED: uncharacterized protein LOC103491868 [Cucumis melo]4.94e-1562.71Show/hide
Query:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE
        M+L+KGKA DSQQCYGGGEG  FNA +V N +DD F+D  AP ID+Q ++EE  TSI+E
Subjt:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE

TrEMBL top hitse value%identityAlignment
A0A0A0M3R6 Uncharacterized protein4.8e-1774.58Show/hide
Query:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE
        MVL+K KA DSQQCYGGGEG  FNA EV+N++DD FMDVP P+IDDQHVD++TRTSI+E
Subjt:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE

A0A1S3BN49 uncharacterized protein LOC1034918682.3e-1162.71Show/hide
Query:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE
        M+L+KGKA DSQQCYGGGEG  FNA +V N +DD F+D  AP ID+Q ++EE  TSI+E
Subjt:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE

A0A5A7ST87 Uncharacterized protein1.1e-1061.02Show/hide
Query:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE
        M L+KGKA DSQQCY  GEG  FNA EVD  +DD F+D+PA  IDDQ +D+E  T I+E
Subjt:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE

A0A5D3CAX9 Uncharacterized protein1.1e-1061.02Show/hide
Query:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE
        M L+KGKA DSQQCY  GEG  FNA EVD  +DD F+D+PA  IDDQ +D+E  T I+E
Subjt:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE

A0A5D3DKS2 Uncharacterized protein3.3e-1059.32Show/hide
Query:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE
        M L+KGKA D +QCYG GEG  FNA E +  +DD FM++PAP ID Q  +EE RTSI+E
Subjt:  MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTAATTAAAGGCAAGGCGAATGACTCCCAACAATGTTATGGCGGTGGTGAAGGTCCATTGTTTAATGCACTGGAGGTTGATAACAAACTGGACGATGCATTCAT
GGATGTTCCTGCTCCGGACATTGATGACCAGCACGTTGATGAGGAGACGAGAACATCCATCAATGAATACACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATTAATTAAAGGCAAGGCGAATGACTCCCAACAATGTTATGGCGGTGGTGAAGGTCCATTGTTTAATGCACTGGAGGTTGATAACAAACTGGACGATGCATTCAT
GGATGTTCCTGCTCCGGACATTGATGACCAGCACGTTGATGAGGAGACGAGAACATCCATCAATGAATACACCTGA
Protein sequenceShow/hide protein sequence
MVLIKGKANDSQQCYGGGEGPLFNALEVDNKLDDAFMDVPAPDIDDQHVDEETRTSINEYT