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IVF0020035 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020035
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAutophagy-related protein
Genome locationchr11:20644518..20648776
RNA-Seq ExpressionIVF0020035
SyntenyIVF0020035
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
GO:0005874 - microtubule (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGU71346.1 gaba receptor-associated protein, partial [Lumnitzera racemosa]1.61e-2885.07Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAERSDIPNIDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

CAA2976371.1 autophagy-related 8f [Olea europaea subsp. europaea]1.96e-2885.07Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAERSDIPNIDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

CAA2976372.1 autophagy-related 8f [Olea europaea subsp. europaea]2.02e-2885.07Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAERSDIPNIDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

QAR18130.1 ATG8f3 [Nicotiana benthamiana]1.42e-2883.82Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPTE
        EKY  R+P  V+V+KAE+SDIPNIDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL PTE
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPTE

XP_028120985.1 autophagy-related protein 8f-like [Camellia sinensis]1.69e-2885.07Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAERSDIPNIDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

TrEMBL top hitse value%identityAlignment
A0A1Q3BVI1 Autophagy-related protein1.4e-2083.82Show/hide
Query:  NEKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        +EKY  R+P  V+V+KAERSDIPNIDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT
Subjt:  NEKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

A0A410JAY6 Autophagy-related protein1.0e-2083.82Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPTE
        EKY  R+P  V+V+KAE+SDIPNIDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL PTE
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPTE

A0A5D2FBV4 Autophagy-related protein1.8e-2085.07Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAERSDIPNIDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

A0A5J4ZWS5 Autophagy-related protein1.4e-2082.86Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPTEKA
        EKY  R+P  V+V+KAERSDIPNIDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT  A
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPTEKA

A0A6I9SL25 Autophagy-related protein1.0e-2085.07Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAERSDIPNIDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

SwissProt top hitse value%identityAlignment
A2YS06 Autophagy-related protein 8C2.7e-2180.6Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAERSDIP+IDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFV N L PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

M1C146 Autophagy-related protein 8C-like1.2e-2180.6Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAERSDIP+IDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFV N+L PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

Q6Z1D5 Autophagy-related protein 8C2.7e-2180.6Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAERSDIP+IDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFV N L PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

Q8S926 Autophagy-related protein 8e9.1e-2279.1Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAE+S++PNIDKKKYLVP+DLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

Q8VYK7 Autophagy-related protein 8f4.5e-2169.51Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT----EKATEKRKTND
        EKY  R+P  V+V+KAE+SDIP IDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL P         E++K +D
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT----EKATEKRKTND

Arabidopsis top hitse value%identityAlignment
AT2G45170.1 AUTOPHAGY 8E6.5e-2379.1Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAE+S++PNIDKKKYLVP+DLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

AT2G45170.2 AUTOPHAGY 8E6.5e-2379.1Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT
        EKY  R+P  V+V+KAE+S++PNIDKKKYLVP+DLTVGQFVYV RKRIKLSAEK IFIFVDNVL PT
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT

AT3G60640.1 Ubiquitin-like superfamily protein4.2e-2269.88Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPTEKATEKRKTNDEEREE
        EKY  R+P  V+V+K+E+SDIPNIDKKKYLVPADLTVGQFVYV RKRI+LSAEK IFIFVDNVL PT          DE +EE
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPTEKATEKRKTNDEEREE

AT4G16520.1 Ubiquitin-like superfamily protein3.2e-2269.51Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT----EKATEKRKTND
        EKY  R+P  V+V+KAE+SDIP IDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL P         E++K +D
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT----EKATEKRKTND

AT4G16520.2 Ubiquitin-like superfamily protein3.2e-2269.51Show/hide
Query:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT----EKATEKRKTND
        EKY  R+P  V+V+KAE+SDIP IDKKKYLVPADLTVGQFVYV RKRIKLSAEK IFIFVDNVL P         E++K +D
Subjt:  EKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPT----EKATEKRKTND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACAATCCCCATCAATCGTTCATTTTCATCCATTAAATCTTGAATTCTTTCTTATTGGTTTTAATGAAAAATATCATGCGAGGCTTCCAATAAGAGTACTTGTTAA
GAAGGCAGAGAGAAGTGATATTCCCAACATTGACAAGAAAAAGTATCTAGTGCCTGCTGACCTGACTGTTGGTCAATTTGTTTATGTTACTCGGAAAAGAATAAAATTGA
GTGCAGAAAAAGAAATTTTTATATTCGTGGACAATGTGTTACTGCCAACAGAAAAGGCGACTGAGAAGAGGAAGACGAACGACGAGGAGAGGGAGGAGACTAATGACGAA
GATGAATGGCAAAGAAGAAAGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATACAATCCCCATCAATCGTTCATTTTCATCCATTAAATCTTGAATTCTTTCTTATTGGTTTTAATGAAAAATATCATGCGAGGCTTCCAATAAGAGTACTTGTTAA
GAAGGCAGAGAGAAGTGATATTCCCAACATTGACAAGAAAAAGTATCTAGTGCCTGCTGACCTGACTGTTGGTCAATTTGTTTATGTTACTCGGAAAAGAATAAAATTGA
GTGCAGAAAAAGAAATTTTTATATTCGTGGACAATGTGTTACTGCCAACAGAAAAGGCGACTGAGAAGAGGAAGACGAACGACGAGGAGAGGGAGGAGACTAATGACGAA
GATGAATGGCAAAGAAGAAAGGTGTAG
Protein sequenceShow/hide protein sequence
MIQSPSIVHFHPLNLEFFLIGFNEKYHARLPIRVLVKKAERSDIPNIDKKKYLVPADLTVGQFVYVTRKRIKLSAEKEIFIFVDNVLLPTEKATEKRKTNDEEREETNDE
DEWQRRKV