CuGenDBv2

Gene ID	IVF0020045
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	pre-mRNA-splicing factor CWC25 homolog
Genome location	chr07:21585987..21588015
RNA-Seq Expression	IVF0020045
Synteny	IVF0020045
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0005684 - U2-type spliceosomal complex (cellular component)
InterPro domains	IPR019339 - CBF1-interacting co-repressor CIR, N-terminal domain IPR022209 - Pre-mRNA splicing factor

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004146897.1 pre-mRNA-splicing factor CWC25 homolog [Cucumis sativus]

1.28e-253

94.03

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Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
        MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA

Query:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
        AATEPS S+    PGALFEDKPHSAND WRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
Subjt:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD

Query:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
        YDSED SPERQRRKHDHDKSSRHDGHSHSEDRRSKA++KNERDRDRGSKYAARTSYDQSDRKT KSNP DSAADR+HDRSKRDRD  S+A ND+DSRRVG
Subjt:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG

Query:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
        E RYYES+ASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQR+KRLKKA EDDALEAKQNAVPSSRNFLD AQKRMY AEKGGSSTIEESIR
Subjt:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR

Query:  RRTYYSQGKSEIEANAFRR
        RRTYYSQGKS+IEANAFRR
Subjt:  RRTYYSQGKSEIEANAFRR

XP_008453851.1 PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Cucumis melo]

1.46e-271

98.57

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Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
        MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA

Query:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
        AATEPS S+    PGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
Subjt:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD

Query:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
        YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
Subjt:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG

Query:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
        EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
Subjt:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR

Query:  RRTYYSQGKSEIEANAFRR
        RRTYYSQGKSEIEANAFRR
Subjt:  RRTYYSQGKSEIEANAFRR

XP_022141219.1 pre-mRNA-splicing factor CWC25 homolog [Momordica charantia]

2.96e-214

84.01

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Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
        MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQI EEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGK SSSDGFKSLETLPS+S   
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA

Query:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
        A TEPS S+    PGALFE+KPHSAND+WRKLHSDPLLIIRQREQ+ALARVKNNPIQMAMIRKTV+VEKHK+KNPDDKR+RKKH HSKSKRHKD S ERD
Subjt:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD

Query:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
        YDSE+ASPERQRR HD DKSS+HD H +SEDRRSK D KNER  DRGSKYAA  S DQSDRKTSK++   SA +RHHDRSKR+RD  S+A+++K+SRRVG
Subjt:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG

Query:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
        E R YES++SETP+ESRH+HRR   KLSEEERAARLREMQQDAELH+EQRW+RLKKAAEDDALEAKQ A PS +NFLD AQKRMYGAEKGGSSTIEESIR
Subjt:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR

Query:  RRTYYSQGKSEIEANAFRR
        RRTYYSQGKSEIEANAFRR
Subjt:  RRTYYSQGKSEIEANAFRR

XP_023551879.1 LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC25 homolog, partial [Cucurbita pepo subsp. pepo]

3.74e-216

84.52

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Query:  ALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSS-STAA
        ALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQI EEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGK S+SDGFKSLETLP++ STAA
Subjt:  ALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSS-STAA

Query:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
        AATEPS S+    PGALFEDKPHSAND+WRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKR K SSPERD
Subjt:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD

Query:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDS-AADRHHDRSKRDRDRDSHANNDKDSRRV
        YDSE  SPE QRR HD DKSS+HD HS+SEDRRSK D  NERDRDRGSKY      DQSDRKT KSNP D  A +RHHD  KRDRD  S+ +N+KDS +V
Subjt:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDS-AADRHHDRSKRDRDRDSHANNDKDSRRV

Query:  GEPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESI
        GE R  E +AS++P E RH+HRRP TKLSEE RAARLREMQQDAE HEEQRW+RLKKAAEDDALEA+QNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESI
Subjt:  GEPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESI

Query:  RRRTYYSQGKSEIEANAFRR
          RTYYSQGKSEIEANAFRR
Subjt:  RRRTYYSQGKSEIEANAFRR

XP_038896474.1 pre-mRNA-splicing factor CWC25 homolog [Benincasa hispida]

8.39e-245

91.41

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Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
        MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQI EEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA

Query:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
        AATEPS S+    PGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHK+KNPD KRERKKHRHSKSKRHKDSS ERD
Subjt:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD

Query:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
        YDSEDASPERQRRKHDH+ SS+HD HSH EDRRSKADSKNERDRDRGSKYAART+YDQSDR+TSKSNP DSAA+RHHDRS+RDRD  S+ANN+K+SRRVG
Subjt:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG

Query:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
        EPR Y S+ASET +ESRH+HRRP TKLSEEER ARL EMQQDAELHEEQRW+RLKKAAEDDALEAKQNA PSSRNFLDTAQKRMYGAEKGGSSTIEESIR
Subjt:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR

Query:  RRTYYSQGKSEIEANAFRR
        RRTYYSQGKSEIEANAFRR
Subjt:  RRTYYSQGKSEIEANAFRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KU62 Cir_N domain-containing protein

1.3e-198

94.03

Show/hide

Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
        MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA

Query:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
        AATEPS S+    PGALFEDKPHSAND WRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
Subjt:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD

Query:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
        YDSED SPERQRRKHDHDKSSRHDGHSHSEDRRSKA++KNERDRDRGSKYAARTSYDQSDRKT KSNP DSAADR+HDRSK  RDRDS+A ND+DSRRVG
Subjt:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG

Query:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
        E RYYES+ASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQR+KRLKKA EDDALEAKQNAVPSSRNFLD AQKRMY AEKGGSSTIEESIR
Subjt:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR

Query:  RRTYYSQGKSEIEANAFRR
        RRTYYSQGKS+IEANAFRR
Subjt:  RRTYYSQGKSEIEANAFRR

A0A1S3BY15 pre-mRNA-splicing factor CWC25 homolog

2.7e-212

98.57

Show/hide

Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
        MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA

Query:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
        AATEPS S+    PGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
Subjt:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD

Query:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
        YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
Subjt:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG

Query:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
        EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
Subjt:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR

Query:  RRTYYSQGKSEIEANAFRR
        RRTYYSQGKSEIEANAFRR
Subjt:  RRTYYSQGKSEIEANAFRR

A0A5A7TSZ0 Pre-mRNA-splicing factor CWC25-like protein

2.7e-212

98.57

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Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
        MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA

Query:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
        AATEPS S+    PGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
Subjt:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD

Query:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
        YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
Subjt:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG

Query:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
        EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
Subjt:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR

Query:  RRTYYSQGKSEIEANAFRR
        RRTYYSQGKSEIEANAFRR
Subjt:  RRTYYSQGKSEIEANAFRR

A0A6J1CHZ1 pre-mRNA-splicing factor CWC25 homolog

1.4e-168

84.01

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Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA
        MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQI EEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGK SSSDGFKSLETLPS+S   
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAA

Query:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD
        A TEPS S+    PGALFE+KPHSAND+WRKLHSDPLLIIRQREQ+ALARVKNNPIQMAMIRKTV+VEKHK+KNPDDKR+RKKH HSKSKRHKD S ERD
Subjt:  AATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERD

Query:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG
        YDSE+ASPERQRR HD DKSS+HD H +SEDRRSK D KNER  DRGSKYAA  S DQSDRKTSK++   S A+RHHDRSK  R+RDS+A+++K+SRRVG
Subjt:  YDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG

Query:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR
        E R YES++SETP+ESRH+HRR   KLSEEERAARLREMQQDAELH+EQRW+RLKKAAEDDALEAKQ A PS +NFLD AQKRMYGAEKGGSSTIEESIR
Subjt:  EPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIR

Query:  RRTYYSQGKSEIEANAFRR
        RRTYYSQGKSEIEANAFRR
Subjt:  RRTYYSQGKSEIEANAFRR

A0A6J1E963 LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC25 homolog

4.5e-167

83.73

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Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLP-SSSTA
        MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQI EEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGK S+SDGFKSLETLP ++STA
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLP-SSSTA

Query:  AAATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPER
        AAA EPS S+    PGALFEDKPHSANDAWRKLHSDPLLIIRQREQ ALARVKNNPIQMAMIRKTVEVEKHK KNPDD+ ERKKH HSKSKR KDS P R
Subjt:  AAATEPSRSR---CPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPER

Query:  DYDSEDASPERQRRK---HDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRD-SAADRHHDRSKRDRDRDSHANNDKD
        +YDSE ASPERQRRK   HD DKSS+ D  S+SEDRRSK D  NERDRD GSK      YDQSDRKT KSNP D  A +RHHD SK  R RDS+ +N+KD
Subjt:  DYDSEDASPERQRRK---HDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRD-SAADRHHDRSKRDRDRDSHANNDKD

Query:  SRRVGEPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTI
        SRRVGE R YE +AS TP E RH+HRRP TKLSEEERAARLREMQQDAE HEEQRW+RLKKAAEDDALEA+QNAVPSSRNFLDTAQKRMY AEKGGSSTI
Subjt:  SRRVGEPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTI

Query:  EESIRRRTYYSQGKSEIEANAFRR
        EESIRRRTYYSQGKSEIEANAFRR
Subjt:  EESIRRRTYYSQGKSEIEANAFRR

SwissProt top hits

e value

%identity

Alignment

Q4P6I3 Pre-mRNA-splicing factor CWC25

2.2e-09

26.68

Show/hide

Query:  KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSD------GFKSLETLPSSSTAAA
        KK WH     N E VWK E++   E+KKL+ELR++  +E+E Q+ + LQE+AG   + +R+D++Y +    G  S+++      G K ++ L        
Subjt:  KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSD------GFKSLETLPSSSTAAA

Query:  ATEPSRSRCPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKR--ERKKHRHSKSK------RHKDSS
          E S++     +     +SA D   K+  DP+L I+Q+EQ A   +  +P ++  ++    ++       + +R  E K+ RH + +      RH +S 
Subjt:  ATEPSRSRCPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKR--ERKKHRHSKSK------RHKDSS

Query:  PERDYDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSN-------PRDSAADRHHDRSKRDRDRDSH
         E    S     +R+   ++   S RHDG    E+RRS    ++++DRDR  +Y  R       R  S+SN         D ++ R      R R R   
Subjt:  PERDYDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSN-------PRDSAADRHHDRSKRDRDRDSH

Query:  ANNDKDSRRVGEPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEK
        A + ++ +R+       S  +   N    R+R    +  ++ R  +L+EM+Q+A   E+QR   + K   ++A + ++ A    R  L  A+ + +G  K
Subjt:  ANNDKDSRRVGEPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEK

Query:  G
        G
Subjt:  G

Q4X1D7 Pre-mRNA-splicing factor cwc25

2.8e-09

28.84

Show/hide

Query:  KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYES-------------GLAVGKAS------SSDGFK
        KK WH   LRN E VW  E++   E+K++++LR++  EE++ QE + LQE +G   +  R+D++Y++             G  +GK         +D  K
Subjt:  KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYES-------------GLAVGKAS------SSDGFK

Query:  SLETLPSSSTAAAATEPSRSRCPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKH-KDKNPDDKRERKKHRHSKSK
         LE       A AA  P              ++  D   K+ +DPLL I++REQ A            M++++V   +H +DK+ D  RER++ R  + +
Subjt:  SLETLPSSSTAAAATEPSRSRCPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKH-KDKNPDDKRERKKHRHSKSK

Query:  -RHKDSSPERD-YDSEDASPERQRRKHDH-----------------------------DKSSRHDGHSHSEDRRSKADSKNER-DRDR-GSKYAARTS-Y
         R +D S  R  ++ EDA    + R H H                             D+   H GH   +DRRS+ D + +R D DR  S+Y  R   Y
Subjt:  -RHKDSSPERD-YDSEDASPERQRRKHDH-----------------------------DKSSRHDGHSHSEDRRSKADSKNER-DRDR-GSKYAARTS-Y

Query:  DQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVGEPRYYESH---ASETPNESRHRHRRPTT---------KLSEEERAARLREMQQDAE
        D S R+ S ++   S    +H   +R R  D      +DSR    P +Y  +    ++ P +S  R R   T         K+ EEER  +L EM  +A 
Subjt:  DQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVGEPRYYESH---ASETPNESRHRHRRPTT---------KLSEEERAARLREMQQDAE

Query:  LHEEQRWKRLKKAAEDDALEAKQ
          +E   KRL++ AE  A+E K+
Subjt:  LHEEQRWKRLKKAAEDDALEAKQ

Q5B0I1 Pre-mRNA-splicing factor cwc25

2.9e-14

29.79

Show/hide

Query:  KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYE--SGLAVGKASSSDGF----KSLETLPSSSTAAA
        KK WH   LRN E VW  E++   E+K++D+L+++  EE++ QE + LQE AG   + +R+D++Y+  S  +   A   +G+    + ++ +   +  + 
Subjt:  KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYE--SGLAVGKASSSDGF----KSLETLPSSSTAAA

Query:  ATEPSRSRCPGALFEDKP--HSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTV---EVEKHKDKNPDDKRERKKHRH--------SKSKR
          E   +  PGA     P  H+  D   K+ +DPLL IR+REQ A           AM++++V   E E+ ++++ + +RER  HRH         +S R
Subjt:  ATEPSRSRCPGALFEDKP--HSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTV---EVEKHKDKNPDDKRERKKHRH--------SKSKR

Query:  HKDSSPERDYDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKY---AARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDS
        H+  S  R         +R+ R  +HD+ S  D     E+R  +    + RD DR  +Y   A R++  + DR+      RD   D   DR+ R   RD+
Subjt:  HKDSSPERDYDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKY---AARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDS

Query:  HANNDKDSRRVGEPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSR
         ++ D+D+   G  R      S + N +   +     +  EE+R  RL EMQ +A+  E  R +R+   AE  ALE KQ      R
Subjt:  HANNDKDSRRVGEPRYYESHASETPNESRHRHRRPTTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSR

Q9DBF7 Pre-mRNA-splicing factor CWC25 homolog

2.6e-18

28.97

Show/hide

Query:  KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLV-PKQERLDFLYE--SGLA------VGKASSSDGFKSLETLPSSST
        KK WH  +LRN+E VWKAEQKHEAE+KK++EL++++ EE+ R+E +   E  G V  K+E+LD++Y+   G+       +G+      F+ +E       
Subjt:  KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLV-PKQERLDFLYE--SGLA------VGKASSSDGFKSLETLPSSST

Query:  AAAATEPSRSRCPGALFEDKPHSAN---DAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPE
          A         PG++F   P  AN   D   K+  DPL IIR++E++    V NNP++M  I++ +++   K +    K ++KKHR  K   H+ SS  
Subjt:  AAAATEPSRSRCPGALFEDKPHSAN---DAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPE

Query:  RDYDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRR
             ++ S  R ++K            ++S    SK      + RD       + S  +     + S  R S+  RH  +     +R     +   SRR
Subjt:  RDYDSEDASPERQRRKHDHDKSSRHDGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRR

Query:  VGEPRYYESHAS-------ETPNESRHRHRRP-----TTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPS-SRNFLDTAQKRMY
           PR  + H S       ++P+  +  ++R      T KLS EE   + +EM ++A+  EE+R   LK+ A +D  E +   + S S  FL   +    
Subjt:  VGEPRYYESHAS-------ETPNESRHRHRRP-----TTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPS-SRNFLDTAQKRMY

Query:  GAEKGGSSTIEESIRRRTYYSQGKS-EIEANAFRR
          E   +S++E+ ++R  +  Q  S  +E N  RR
Subjt:  GAEKGGSSTIEESIRRRTYYSQGKS-EIEANAFRR

Q9NXE8 Pre-mRNA-splicing factor CWC25 homolog

3.7e-17

29.68

Show/hide

Query:  KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLV-PKQERLDFLYE--SGLA------VGKASSSDGFKSLETLPSSST
        KK WH  +LRN+E VWKAEQKHEAE+KK++EL++++ EE+ R+E +   E  G V  K+E+LD++Y+   G+       +G+      F+ +E       
Subjt:  KKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLV-PKQERLDFLYE--SGLA------VGKASSSDGFKSLETLPSSST

Query:  AAAATEPSRSRCPGALFEDKPHSAN---DAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPE
          A         PG++F   P  AN   D   K+  DPL IIR++E++    V NNP++M  I++ +++   K +    K ++KKH   K  +H+ SS +
Subjt:  AAAATEPSRSRCPGALFEDKPHSAN---DAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPE

Query:  RDYDSEDASPERQRRKHDHDKS--SRHDGHS---HSEDRRSKADSKNERDRDRG----SKYAARTSYDQSDRKTSKSNPRDSAADRHHDRS--KRDRD-R
        R    ++ S  R ++K  +     S+  G+     + DR          ++ RG    +   +R+S     R  SK + R++ +     RS  +R R  R
Subjt:  RDYDSEDASPERQRRKHDHDKS--SRHDGHS---HSEDRRSKADSKNERDRDRG----SKYAARTSYDQSDRKTSKSNPRDSAADRHHDRS--KRDRD-R

Query:  DSHANNDKDSRR-VGEPRYYESHASETPNESRHRHRRP---TTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQK
         S  +N K +RR  G+ R      S +P +  ++ R     T KLS EE   + +EM ++A+  EE+R   LK+ A+D+  E +   + S         K
Subjt:  DSHANNDKDSRR-VGEPRYYESHASETPNESRHRHRRP---TTKLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQK

Query:  RMYGAEKGGSSTIEESIRRRTYYSQGKS-EIEANAFRR
             E   +S++E+ ++R  Y  Q  S  +E N  +R
Subjt:  RMYGAEKGGSSTIEESIRRRTYYSQGKS-EIEANAFRR

Arabidopsis top hits

e value

%identity

Alignment

AT2G44195.1 CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor

3.4e-34

56.85

Show/hide

Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQ-ERLDFLYESGLAVGKASSSDGFKSLETLPSSSTA
        MALKFLNKKGWHTGS+RN+E VWKAEQKHEAEQ+K++          ER EFR +QEQAGLVP++ ERL+FLY+  LAV K + S     +        A
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQ-ERLDFLYESGLAVGKASSSDGFKSLETLPSSSTA

Query:  AAATEPSRSRCPGALF--EDKPHSANDAWRKLHSDPLLIIRQREQQ
               R+  PGALF  +DK HSAND+WRK HSDPLL+IRQ+EQ+
Subjt:  AAATEPSRSRCPGALF--EDKPHSANDAWRKLHSDPLLIIRQREQQ

AT2G44200.1 CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor

2.6e-90

47.98

Show/hide

Query:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDG----FKSLETLPSS
        M +KFLNKKGWHTGSLRNIE VWKAEQK EAEQKKL+ELR QIL+E+ER EFR LQEQAGL+P+QERL+FLY+SGLAVGK S+S       K  + L  S
Subjt:  MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDG----FKSLETLPSS

Query:  STAAAATEPSRSRCPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPER
           ++A+E      PGALFE+K  SAND+WRKLHSDPLL+IRQREQ+ALA++KNNP++MA+IRK+VE EK K K+ D K  +KKH+    K  K SS  +
Subjt:  STAAAATEPSRSRCPGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPER

Query:  DYDS-EDASPERQRRKHDHDKSS-RHDGH-------------------SHSEDRRSKADSKNERDRDRGSKYAARTSY--DQSDRKTSKSN---------
          DS ED+  E   RK  H K+S  HD H                    H E RRS+ D  ++R     + Y  R S   D+S R+ S+ N         
Subjt:  DYDS-EDASPERQRRKHDHDKSS-RHDGH-------------------SHSEDRRSKADSKNERDRDRGSKYAARTSY--DQSDRKTSKSN---------

Query:  ----PRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG----EPRYYESHASE----------------------------------TPNESRHRHRRPTT
             R  + D+H +R + D D +      +D RR      EP+  ++  +E                                   PNE ++R R+  +
Subjt:  ----PRDSAADRHHDRSKRDRDRDSHANNDKDSRRVG----EPRYYESHASE----------------------------------TPNESRHRHRRPTT

Query:  KLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIRRRTYYSQGKSEIEANAFRR
        KLSEEERAARL++MQ DAE+HEEQRW RLKKA E DA+EA +N V + ++FLD A K +YG EKGGSSTIEES+RRR+YYSQ  +  E NAFRR
Subjt:  KLSEEERAARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIRRRTYYSQGKSEIEANAFRR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTTGAAGTTCTTGAACAAAAAAGGATGGCACACTGGCAGTCTCCGGAACATAGAGAACGTATGGAAGGCGGAGCAAAAGCATGAGGCCGAGCAGAAGAAGTTGGA
CGAGCTCCGCAAACAGATCCTGGAGGAGAAAGAACGCCAGGAGTTTCGTCTTCTTCAAGAACAAGCTGGCCTCGTTCCGAAGCAGGAGAGATTGGATTTTCTTTATGAAT
CGGGTTTGGCAGTTGGGAAAGCTAGCAGTTCCGATGGATTTAAAAGCCTTGAAACCCTACCTAGTTCGTCTACTGCAGCGGCTGCCACTGAACCATCTAGAAGCCGCTGC
CCTGGAGCTCTGTTTGAGGATAAACCTCATTCTGCCAATGATGCATGGAGGAAACTCCATTCTGATCCTTTGCTCATCATCCGACAGCGTGAGCAACAAGCTCTTGCTCG
TGTAAAAAACAATCCTATTCAGATGGCTATGATTCGCAAAACTGTTGAAGTGGAAAAACACAAGGATAAAAATCCTGATGACAAGAGAGAACGGAAGAAGCACCGCCATA
GTAAGTCTAAGCGCCATAAAGATTCTTCTCCAGAAAGAGATTATGATTCTGAAGATGCCAGCCCTGAAAGGCAGAGAAGGAAACACGATCATGACAAGAGTTCAAGACAT
GATGGCCATTCTCATTCAGAAGATAGAAGAAGCAAAGCAGATTCTAAGAACGAGAGGGATCGTGATAGAGGGTCAAAATATGCTGCACGAACGAGCTATGATCAGTCAGA
TCGAAAGACATCCAAAAGCAATCCTCGTGATTCTGCAGCAGATAGACATCATGACAGATCAAAGAGAGACAGAGACAGAGATTCTCATGCTAACAATGATAAGGACAGCA
GAAGAGTGGGGGAACCAAGATACTATGAATCCCATGCTTCTGAAACTCCTAACGAGTCTCGCCACAGGCATCGCAGACCTACCACAAAGCTTTCAGAGGAAGAGCGTGCT
GCTAGACTGCGTGAAATGCAGCAAGATGCTGAGTTACATGAAGAGCAACGATGGAAGCGTTTGAAGAAGGCAGCTGAGGATGATGCACTGGAAGCCAAACAAAATGCAGT
GCCCTCGAGCCGAAATTTCTTGGACACGGCTCAGAAACGCATGTACGGTGCAGAGAAGGGAGGAAGCTCAACGATCGAGGAGAGTATTCGCCGTAGGACATATTATTCAC
AGGGTAAATCTGAAATTGAAGCCAATGCTTTTAGACGGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAAAATEPSRSRC
PGALFEDKPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKRERKKHRHSKSKRHKDSSPERDYDSEDASPERQRRKHDHDKSSRH
DGHSHSEDRRSKADSKNERDRDRGSKYAARTSYDQSDRKTSKSNPRDSAADRHHDRSKRDRDRDSHANNDKDSRRVGEPRYYESHASETPNESRHRHRRPTTKLSEEERA
ARLREMQQDAELHEEQRWKRLKKAAEDDALEAKQNAVPSSRNFLDTAQKRMYGAEKGGSSTIEESIRRRTYYSQGKSEIEANAFRR

IVF0020045 (gene) of Melon (IVF77) v1 genome