CuGenDBv2

Gene ID	IVF0020047
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	CYSTM domain-containing protein
Genome location	chr08:4565736..4566155
RNA-Seq Expression	IVF0020047
Synteny	IVF0020047
Gene Ontology terms	GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR028144 - Cysteine-rich transmembrane CYSTM domain IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

DAD22205.1 TPA_asm: hypothetical protein HUJ06_023669 [Nelumbo nucifera]

2.94e-20

71.88

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQ-GPGCLEACLAALCCCCLVDQCCWCCDP
        MS  KYAYPY  +GYYQGPP   V+APPQYAA PP+ GPG LE CLAALCCCCL+D+CC  CDP
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQ-GPGCLEACLAALCCCCLVDQCCWCCDP

KAB2094453.1 hypothetical protein ES319_A02G159600v1 [Gossypium barbadense]

1.70e-19

71.88

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQG-PGCLEACLAALCCCCLVDQCCWCCDP
        MS  KYAYPY  +GYYQGPP   VVAPPQYAA PP+  PG LE CLAALCCCCL+D+CC  CDP
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQG-PGCLEACLAALCCCCLVDQCCWCCDP

KAG6594919.1 hypothetical protein SDJN03_11472, partial [Cucurbita argyrosperma subsp. sororia]

3.27e-34

85.51

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLFAY
         S  KYAYPYY  GYYQGPPPP VVAPP YAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDP+ LFA+
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLFAY

KGN48678.1 hypothetical protein Csa_004171 [Cucumis sativus]

8.82e-45

100

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLFA
        MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLFA
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLFA

XP_007047698.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Theobroma cacao]

2.94e-20

71.88

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQ-GPGCLEACLAALCCCCLVDQCCWCCDP
        MS  KYAYPY  +GYYQGPP   V+APPQYAA PP+ GPG LE CLAALCCCCL+D+CC  CDP
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQ-GPGCLEACLAALCCCCLVDQCCWCCDP

TrEMBL top hits

e value

%identity

Alignment

A0A061DHF5 CYSTM domain-containing protein

7.3e-14

69.12

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPP-QGPGCLEACLAALCCCCLVDQCCWCCDPWCLF
        MS  KYAYPY  +GYYQG   PPV+APPQYAA PP +GPG LE CLAALCCCCL+D+C  CCDP  +F
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPP-QGPGCLEACLAALCCCCLVDQCCWCCDPWCLF

A0A0A0KGL9 CYSTM domain-containing protein

9.1e-33

100

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLFA
        MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLFA
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLFA

A0A2P5YUE9 CYSTM domain-containing protein

2.8e-13

69.12

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPP-QGPGCLEACLAALCCCCLVDQCCWCCDPWCLF
        MS  KYAYPY  +GYYQG   PPVVAPPQYAA PP + PG LE CLAALCCCCL+D+C  CCDP  +F
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPP-QGPGCLEACLAALCCCCLVDQCCWCCDPWCLF

A0A5D2RJF5 CYSTM domain-containing protein

2.8e-13

69.12

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPP-QGPGCLEACLAALCCCCLVDQCCWCCDPWCLF
        MS  KYAYPY  +GYYQG   PPVVAPPQYAA PP + PG LE CLAALCCCCL+D+C  CCDP  +F
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPP-QGPGCLEACLAALCCCCLVDQCCWCCDPWCLF

U5D7A4 CYSTM domain-containing protein

2.1e-13

67.16

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLF
        MS  KYAYPY  +GYYQG   PPV+APPQYAA PP+  G LE CLAALCCCCL+D+C  CCDP  +F
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G41420.1 proline-rich family protein

6.7e-04

Show/hide

Query:  QGKYAYPYYGEGY-YQGPPPP--PVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQC
        QG     Y  +GY  QG PPP  P   PP         PG LE CLAALCCCCL+D C
Subjt:  QGKYAYPYYGEGY-YQGPPPP--PVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQC

AT4G33660.1 unknown protein

1.1e-11

56.94

Show/hide

Query:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGP---------GCLEACLAALCCCCLVDQCCWCCDP
        MS  KYAYPY   G Y   PPPPV  PPQY   PP  P         G LE  LAALCCCCLVD+C  CCDP
Subjt:  MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGP---------GCLEACLAALCCCCLVDQCCWCCDP

AT5G67600.1 unknown protein

1.0e-04

51.85

Show/hide

Query:  YAYPYYGEGYYQGPPPPPVVAPPQYAAAP--PQGPGCLEACLAALCCCCLVDQC
        Y  P Y +GY     P     PPQY+ AP   Q  G LE CLAALCCCCL+D C
Subjt:  YAYPYYGEGYYQGPPPPPVVAPPQYAAAP--PQGPGCLEACLAALCCCCLVDQC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCCAAGGCAAGTACGCTTATCCTTACTACGGTGAAGGTTACTATCAGGGACCGCCGCCGCCTCCAGTGGTAGCGCCACCACAATATGCAGCGGCTCCTCCCCAGGG
ACCCGGATGCCTGGAGGCTTGTCTTGCTGCCCTGTGCTGCTGCTGTCTTGTTGACCAATGCTGCTGGTGCTGTGATCCATGGTGTCTGTTTGCCTACTAG

mRNA sequence

Show/hide mRNA sequence

CTACTTGTCATCAACACTTCAATCTGCTAAGCCACGTTGGCAACAACAAACAACCATAAAAACTCTCTTTCTAATTCAATCGAAATGCTAATATCACATAAAATCTGCTC
TGGGTTTTGATCTGCATGAAGTAAAAGATGAGCCAAGGCAAGTACGCTTATCCTTACTACGGTGAAGGTTACTATCAGGGACCGCCGCCGCCTCCAGTGGTAGCGCCACC
ACAATATGCAGCGGCTCCTCCCCAGGGACCCGGATGCCTGGAGGCTTGTCTTGCTGCCCTGTGCTGCTGCTGTCTTGTTGACCAATGCTGCTGGTGCTGTGATCCATGGT
GTCTGTTTGCCTACTAG

Protein sequence

Show/hide protein sequence

MSQGKYAYPYYGEGYYQGPPPPPVVAPPQYAAAPPQGPGCLEACLAALCCCCLVDQCCWCCDPWCLFAY

IVF0020047 (gene) of Melon (IVF77) v1 genome