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IVF0020060 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020060
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr12:10469374..10469535
RNA-Seq ExpressionIVF0020060
SyntenyIVF0020060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026022.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]1.99e-0863.64Show/hide
Query:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP
        +RS G +NHWKC  SEG  LSSRTS    KKTR  MP+ QFSRP
Subjt:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP

KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]2.03e-0968.18Show/hide
Query:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP
        +RS GVKNHWKC   E   LSSRTS V  KKTR RMP+ QFSRP
Subjt:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP

KAA0037172.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]6.13e-0965.91Show/hide
Query:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP
        +R F V+NHWKC  SEG  LSSRTS    KKTR RMP  QFSRP
Subjt:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]3.62e-0865.12Show/hide
Query:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSR
        +RS GV+NHWKC  SEG  L+SRTS    KKTR RMP+ QFSR
Subjt:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSR

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]1.92e-0865.91Show/hide
Query:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP
        +RS GV+N WKC   EG  LSSRTS    KKTR RMPQ QFSRP
Subjt:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP

TrEMBL top hitse value%identityAlignment
A0A5A7SLK2 Retrovirus-related Pol polyprotein from transposon 17.61.2e-0563.64Show/hide
Query:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP
        +RS G +NHWKC  SEG  LSSRTS    KKTR  MP+ QFSRP
Subjt:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein9.5e-0665.12Show/hide
Query:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSR
        +RS GV+NHWKC  SEG  L+SRTS    KKTR RMP+ QFSR
Subjt:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSR

A0A5D3CQ36 Putative nuclease HARBI14.3e-0665.91Show/hide
Query:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP
        +R F V+NHWKC  SEG  LSSRTS    KKTR RMP  QFSRP
Subjt:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP

A0A5D3DFP2 Uncharacterized protein7.3e-0665.91Show/hide
Query:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP
        +RS GV+N WKC   EG  LSSRTS    KKTR RMPQ QFSRP
Subjt:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP

A0A5D3E5W4 NBS-LRR type resistance protein1.1e-0668.18Show/hide
Query:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP
        +RS GVKNHWKC   E   LSSRTS V  KKTR RMP+ QFSRP
Subjt:  QRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCTTCCAATGAGTGGCAACGCTCGTTTGGTGTCAAAAACCACTGGAAATGCATCTGGAGTGAAGGAAAAGAGCTGAGCTCAAGGACTTCTAAAGTTCATCT
CAAGAAAACGAGAGGGAGAATGCCCCAGATTCAGTTTTCTCGTCCTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCTTCCAATGAGTGGCAACGCTCGTTTGGTGTCAAAAACCACTGGAAATGCATCTGGAGTGAAGGAAAAGAGCTGAGCTCAAGGACTTCTAAAGTTCATCT
CAAGAAAACGAGAGGGAGAATGCCCCAGATTCAGTTTTCTCGTCCTGAGTAA
Protein sequenceShow/hide protein sequence
MANASNEWQRSFGVKNHWKCIWSEGKELSSRTSKVHLKKTRGRMPQIQFSRPE