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IVF0020087 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020087
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRT_RNaseH domain-containing protein
Genome locationchr04:11606651..11607154
RNA-Seq ExpressionIVF0020087
SyntenyIVF0020087
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037872.1 uncharacterized protein E6C27_scaffold36G00360 [Cucumis melo var. makuwa]4.63e-10496.41Show/hide
Query:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
        MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
Subjt:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF

Query:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV
        IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDES  T +  V
Subjt:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV

KAA0067858.1 uncharacterized protein E6C27_scaffold2484G00710 [Cucumis melo var. makuwa]2.47e-6871.08Show/hide
Query:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
        +AL   TSDI KNG  +KMT   SF VPCSI+ MDLGHVLCDLGASINLMPLSIFKKL+I+EVQP HMR Q  DRSI   +GKIED+LVKVDKFLF ADF
Subjt:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF

Query:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESL
        IILDYEA++EV II  R FLSTG AL  +HQGELT+ FN+ E+KFNV+NAMKFP DD++ + IESL
Subjt:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESL

XP_008447648.1 PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo]2.29e-114100Show/hide
Query:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
        MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
Subjt:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF

Query:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV
        IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV
Subjt:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV

XP_008455795.1 PREDICTED: uncharacterized protein LOC103495890 [Cucumis melo]8.16e-6367.1Show/hide
Query:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
        + L QATS+I+KN V +KMTYP SF V CSID MDLGH LC+LGASINLM LSIFKKL + E QPT M  Q  DRSIT P+GKI+DVL+KVDKFLF ADF
Subjt:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF

Query:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPL
        IILDYEAD EV IIL   FL TG AL  +HQ ELT+  N+++I FN++NAM  PL
Subjt:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPL

XP_008465121.1 PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo]2.08e-7171.08Show/hide
Query:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
        +AL   TSDI KNG  +KMT   SF VPCSI+ MDLGHVLCDLGASINLMPLSIFKKL+I+EVQP HMR Q  DRSI   +GKIED+LVKVDKFLF ADF
Subjt:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF

Query:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESL
        IILDYEA++EV II  R FLSTG AL  +HQGELT+ FN+ E+KFNV+NAMKFP DD++ + IESL
Subjt:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESL

TrEMBL top hitse value%identityAlignment
A0A1S3BHX3 uncharacterized protein LOC1034900552.2e-88100Show/hide
Query:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
        MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
Subjt:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF

Query:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV
        IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV
Subjt:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV

A0A1S3C2F1 uncharacterized protein LOC1034958902.6e-4967.1Show/hide
Query:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
        + L QATS+I+KN V +KMTYP SF V CSID MDLGH LC+LGASINLM LSIFKKL + E QPT M  Q  DRSIT P+GKI+DVL+KVDKFLF ADF
Subjt:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF

Query:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPL
        IILDYEAD EV IIL   FL TG AL  +HQ ELT+  N+++I FN++NAM  PL
Subjt:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPL

A0A1S3CN55 uncharacterized protein LOC1035028058.3e-5671.08Show/hide
Query:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
        +AL   TSDI KNG  +KMT   SF VPCSI+ MDLGHVLCDLGASINLMPLSIFKKL+I+EVQP HMR Q  DRSI   +GKIED+LVKVDKFLF ADF
Subjt:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF

Query:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESL
        IILDYEA++EV II  R FLSTG AL  +HQGELT+ FN+ E+KFNV+NAMKFP DD++ + IESL
Subjt:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESL

A0A5A7VJ95 Uncharacterized protein8.3e-5671.08Show/hide
Query:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
        +AL   TSDI KNG  +KMT   SF VPCSI+ MDLGHVLCDLGASINLMPLSIFKKL+I+EVQP HMR Q  DRSI   +GKIED+LVKVDKFLF ADF
Subjt:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF

Query:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESL
        IILDYEA++EV II  R FLSTG AL  +HQGELT+ FN+ E+KFNV+NAMKFP DD++ + IESL
Subjt:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESL

A0A5D3BDT2 RT_RNaseH domain-containing protein7.2e-8496.41Show/hide
Query:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
        MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF
Subjt:  MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADF

Query:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV
        IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDES  T +  V
Subjt:  IILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTAAGGCAAGCAACAAGCGACATCTACAAGAATGGGGTGCTAGAGAAGATGACATACCCTGGTAGCTTCAAGGTACCTTGCTCGATAGACGGAATGGATTTGGG
TCATGTTTTATGCGACCTTGGGGCGAGCATCAACTTGATGCCTCTTTCTATCTTCAAGAAATTAAAGATAAAGGAGGTTCAACCAACTCATATGAGGTTTCAACTTGCAG
ACAGATCCATTACGAATCCTAAGGGTAAGATTGAAGACGTTTTGGTAAAGGTAGACAAATTTCTGTTTTTCGCAGACTTCATCATTCTAGACTACGAAGCTGATGAAGAG
GTTCTTATCATCTTAAGGCGGCTGTTCTTGTCAACTGGTCGTGCCCTCACATATATCCACCAAGGGGAGTTGACAGTGTTTTTCAATAACAAGGAAATCAAATTCAATGT
TATCAACGCGATGAAGTTCCCTCTTGATGATGAAAGTTGCAACACAATAGAGTCCCTAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTAAGGCAAGCAACAAGCGACATCTACAAGAATGGGGTGCTAGAGAAGATGACATACCCTGGTAGCTTCAAGGTACCTTGCTCGATAGACGGAATGGATTTGGG
TCATGTTTTATGCGACCTTGGGGCGAGCATCAACTTGATGCCTCTTTCTATCTTCAAGAAATTAAAGATAAAGGAGGTTCAACCAACTCATATGAGGTTTCAACTTGCAG
ACAGATCCATTACGAATCCTAAGGGTAAGATTGAAGACGTTTTGGTAAAGGTAGACAAATTTCTGTTTTTCGCAGACTTCATCATTCTAGACTACGAAGCTGATGAAGAG
GTTCTTATCATCTTAAGGCGGCTGTTCTTGTCAACTGGTCGTGCCCTCACATATATCCACCAAGGGGAGTTGACAGTGTTTTTCAATAACAAGGAAATCAAATTCAATGT
TATCAACGCGATGAAGTTCCCTCTTGATGATGAAAGTTGCAACACAATAGAGTCCCTAGTGTGA
Protein sequenceShow/hide protein sequence
MALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFFADFIILDYEADEE
VLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDDESCNTIESLV