CuGenDBv2

Gene ID	IVF0020115
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	serine/arginine-rich splicing factor 11 isoform X1
Genome location	chr02:564449..567333
RNA-Seq Expression	IVF0020115
Synteny	IVF0020115
Gene Ontology terms	GO:0016853 - isomerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]

1.25e-95

100

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Query:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
        MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
Subjt:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_011659818.1 NKAP family protein isoform X2 [Cucumis sativus]

3.28e-88

94.51

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Query:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
        MAA+SSA TSNSSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDY+RS   SESEPETSSRSKRHKKNDRTKKDK
Subjt:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]

1.97e-83

91.26

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Query:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSES+Y+RS SSS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_031738322.1 NKAP family protein isoform X1 [Cucumis sativus]

1.50e-89

95.6

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Query:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
        MAA+SSA TSNSSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDY+R NSSSESEPETSSRSKRHKKNDRTKKDK
Subjt:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_038879353.1 NKAP family protein [Benincasa hispida]

3.63e-88

92.86

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Query:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRR RREKDRDTLR+RKKSRSHSKRHRRHRRSSSDSLSSSDSESDY+R+NSSS+SEPETS RSKRHK+NDR K+DK
Subjt:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVZ3 Uncharacterized protein

3.6e-68

94.51

Show/hide

Query:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
        MAA+SSA TSNSSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDY+R   SSESEPETSSRSKRHKKNDRTKKDK
Subjt:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G

7.4e-74

100

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Query:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
        MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
Subjt:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1C3K8 serine/arginine-rich splicing factor 11

1.4e-64

91.26

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Query:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSES+Y+RS SSS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X1

2.6e-58

88.52

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Query:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
        MAASSS+ +  +SDSSSSSSRRRRRRRTRREKDRD LRIRKKSRSHSKR RRHRRSSS+SLSSSDSESDY+RS+SSS+SEPE S RSKRHKKND TK  K
Subjt:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+S HHKRRKHKAKEKQPEE SSSPVQLSKFLARE DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1I4D4 NKAP family protein isoform X2

9.7e-58

87.98

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Query:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK
        MAASSS+ +  +SDSSSSSSRRRRRRRTRREKDRD LRIRKKSRSHSKR RRHRRSSS+SLSSSDSESDY+RS+SSS+SEPE S RSKRHKKND TKK  
Subjt:  MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         RERS+S HHKRRKHKAKEKQPEE SSSPVQLSKFLARE DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27860.1 unknown protein

4.8e-33

60.54

Show/hide

Query:  MAASSSATTSNSSDSSSSSSRRR--RRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKK
        MAASSS+++S+ S  SS S RRR  RR   R ++DRD+L++RKKSRS SK+ RR R+ SSDS       SD + S+SSSES      +S+RHKK+++ KK
Subjt:  MAASSSATTSNSSDSSSSSSRRR--RRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKK

Query:  DKERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         K++ERS+SH HKR K++ ++K + E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  DKERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

AT5G27860.2 unknown protein

4.8e-33

60.54

Show/hide

Query:  MAASSSATTSNSSDSSSSSSRRR--RRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKK
        MAASSS+++S+ S  SS S RRR  RR   R ++DRD+L++RKKSRS SK+ RR R+ SSDS       SD + S+SSSES      +S+RHKK+++ KK
Subjt:  MAASSSATTSNSSDSSSSSSRRR--RRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKK

Query:  DKERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         K++ERS+SH HKR K++ ++K + E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  DKERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGCCTCATCTTCGGCTACGACATCCAATTCTTCTGATTCATCGTCTTCTTCTTCTCGCCGTCGTCGTCGCCGGAGAACTCGTCGTGAAAAAGATCGGGACACGCT
TAGGATTCGAAAGAAGTCTCGCTCTCATTCCAAACGCCATCGAAGGCACCGCCGCTCCTCCTCCGACTCTCTCTCTTCCTCAGACTCCGAATCCGATTACGCCCGAAGCA
ATAGCTCTTCTGAAAGTGAGCCTGAAACATCAAGCCGTTCGAAGCGGCATAAGAAGAATGATAGAACAAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGTCATCACCAT
AAAAGGCGTAAACATAAAGCTAAAGAGAAACAACCAGAGGAGAGTAGTAGTCCTGTGCAGCTGTCTAAGTTTTTAGCACGGGAGAAGGATGATGGTACACGGCGAAGTGC
CGTCTCTGGCAAAAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

mRNA sequence

Show/hide mRNA sequence

AATAACCTTATACCGAGGGTTTCCTAAACCTGTCGAGAACCTTACCCGCCGGCGCCGATGATTTATATAGCCTCACTGTAACTTGTGATATATTTGCTGATCAATGGCGG
CCTCATCTTCGGCTACGACATCCAATTCTTCTGATTCATCGTCTTCTTCTTCTCGCCGTCGTCGTCGCCGGAGAACTCGTCGTGAAAAAGATCGGGACACGCTTAGGATT
CGAAAGAAGTCTCGCTCTCATTCCAAACGCCATCGAAGGCACCGCCGCTCCTCCTCCGACTCTCTCTCTTCCTCAGACTCCGAATCCGATTACGCCCGAAGCAATAGCTC
TTCTGAAAGTGAGCCTGAAACATCAAGCCGTTCGAAGCGGCATAAGAAGAATGATAGAACAAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGTCATCACCATAAAAGGC
GTAAACATAAAGCTAAAGAGAAACAACCAGAGGAGAGTAGTAGTCCTGTGCAGCTGTCTAAGTTTTTAGCACGGGAGAAGGATGATGGTACACGGCGAAGTGCCGTCTCT
GGCAAAAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAATGACCGTT
TGTGTTGGAAATGAAGGTAAGAGGCATTGTTAGCTGCTGCATGAAAAAAATAGAGTTCTACCAACAGTTGTGTGGTGATTATGTTGTAGAGACATTTTAAGCCTTTGAAC
TTTCTTCCCTTGATGTTTTGATGCCCATATGGATCAAGATCTTGTTTTAATTCCTTATGGACAGGAGAAATTGAAATGAAAAATTATTTACTTTGCCTTTCTTTTCTTTT
TTCGATGAAATGGAATGGGAAGAACGATTGATTCTTGTT

Protein sequence

Show/hide protein sequence

MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHH
KRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

IVF0020115 (gene) of Melon (IVF77) v1 genome