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IVF0020116 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020116
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:6043833..6044105
RNA-Seq ExpressionIVF0020116
SyntenyIVF0020116
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK20957.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.40e-2694.55Show/hide
Query:  YIFSGFNERSFNGIGVPTDLGTFEDRFQRVWVTFGVSSDGFRSQFQRYPSLIFLA
        Y+  GFNERSFNGIGVPTDLGTFEDRFQRVWVTFGVSSDGFRSQFQRYPSLIFLA
Subjt:  YIFSGFNERSFNGIGVPTDLGTFEDRFQRVWVTFGVSSDGFRSQFQRYPSLIFLA
TrEMBL top hitse value%identityAlignment
A0A5D3DBE9 Retrovirus-related Pol polyprotein from transposon TNT 1-947.2e-2294.55Show/hide
Query:  YIFSGFNERSFNGIGVPTDLGTFEDRFQRVWVTFGVSSDGFRSQFQRYPSLIFLA
        Y+  GFNERSFNGIGVPTDLGTFEDRFQRVWVTFGVSSDGFRSQFQRYPSLIFLA
Subjt:  YIFSGFNERSFNGIGVPTDLGTFEDRFQRVWVTFGVSSDGFRSQFQRYPSLIFLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGCAACCGACAGTTACCTAAAGGCAAAGAGAGAGAGATGACAAGCCTAAGATTAACAGCGATCGGTGGTAGTCCTTGGCACATTTCGGGGCATTTTCATTACAT
TTTTTCAGGCTTCAACGAGCGTAGCTTCAACGGCATTGGGGTTCCAACAGATTTGGGTACATTTGAGGACAGATTCCAACGAGTATGGGTCACTTTTGGGGTCAGTTCCG
ATGGATTTAGGTCTCAATTTCAGAGGTATCCGTCTCTCATATTCTTGGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGCAACCGACAGTTACCTAAAGGCAAAGAGAGAGAGATGACAAGCCTAAGATTAACAGCGATCGGTGGTAGTCCTTGGCACATTTCGGGGCATTTTCATTACAT
TTTTTCAGGCTTCAACGAGCGTAGCTTCAACGGCATTGGGGTTCCAACAGATTTGGGTACATTTGAGGACAGATTCCAACGAGTATGGGTCACTTTTGGGGTCAGTTCCG
ATGGATTTAGGTCTCAATTTCAGAGGTATCCGTCTCTCATATTCTTGGCATAG
Protein sequenceShow/hide protein sequence
MEGNRQLPKGKEREMTSLRLTAIGGSPWHISGHFHYIFSGFNERSFNGIGVPTDLGTFEDRFQRVWVTFGVSSDGFRSQFQRYPSLIFLA