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IVF0020119 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020119
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionextensin-like
Genome locationchr03:4762302..4762598
RNA-Seq ExpressionIVF0020119
SyntenyIVF0020119
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058957.1 hypothetical protein E6C27_scaffold98G001420 [Cucumis melo var. makuwa]9.84e-62100Show/hide
Query:  MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPPPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF
        MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPPPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF
Subjt:  MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPPPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF

TYK29731.1 hypothetical protein E5676_scaffold63236G00010 [Cucumis melo var. makuwa]6.79e-1945.71Show/hide
Query:  MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLP--------PPPPICR---------------------------QGAPPPAK
        MGF  LASYLF LL AFF LNLP+KLTAHYIH SS T L  Y  PPLPLP        PPPP  +                           +  PPPAK
Subjt:  MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLP--------PPPPICR---------------------------QGAPPPAK

Query:  KQNKLKQ-----LPSLSP--PPPMFKWPRRFTPKSPPPPF
        K++  K      +P L P  PPP + WPR+F   SPPPPF
Subjt:  KQNKLKQ-----LPSLSP--PPPMFKWPRRFTPKSPPPPF

XP_022939147.1 extensin-like [Cucurbita moschata]1.27e-1249.49Show/hide
Query:  YLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPP---------PPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF
        YLFSLLIA   L+LP+KL A  +H S  TN + Y  PP PLPP         PP +C Q APPP   +N+ K     SPP  M  W R+FT  SPPPPF
Subjt:  YLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPP---------PPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF

XP_022993352.1 extensin-like [Cucurbita maxima]7.69e-1350.48Show/hide
Query:  MGFETLAS-YLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLP------PPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKS
        MG   LAS YLFSLLIA   L+LP+KL A  +H S  TN + Y  PP P P      PPP +C Q APPP K ++K K  P    PP    W R+FT  S
Subjt:  MGFETLAS-YLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLP------PPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

XP_023551507.1 extensin-3-like [Cucurbita pepo subsp. pepo]8.50e-1353.54Show/hide
Query:  YLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPP---------PPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF
        YLFSLLIA   L+LP+KL A  +H S  TN + Y  PP PLPP         PP +C Q APPP  K N+ K  PS  PP PM  W R+FT KSPPPPF
Subjt:  YLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPP---------PPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0KI69 Uncharacterized protein9.0e-4292.86Show/hide
Query:  MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPPPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF
        MGFETLASYLFSLLIAFFFLNLP+KLTAHYIH+SSSTNLY YG PPLPL PPPPICRQGAPPPAKKQNKLK LPSLSPPPP FKWPRRFTPKSPPPPF
Subjt:  MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPPPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF

A0A5A7UW72 Uncharacterized protein9.3e-47100Show/hide
Query:  MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPPPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF
        MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPPPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF
Subjt:  MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPPPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF

A0A5D3E2A1 Uncharacterized protein1.6e-1445.71Show/hide
Query:  MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLP--------PPPPICR---------------------------QGAPPPAK
        MGF  LASYLF LL AFF LNLP+KLTAHYIH SS T L  Y  PPLPLP        PPPP  +                           +  PPPAK
Subjt:  MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLP--------PPPPICR---------------------------QGAPPPAK

Query:  KQNKLKQ-----LPSLSP--PPPMFKWPRRFTPKSPPPPF
        K++  K      +P L P  PPP + WPR+F   SPPPPF
Subjt:  KQNKLKQ-----LPSLSP--PPPMFKWPRRFTPKSPPPPF

A0A6J1FFZ9 extensin-like1.5e-0949.07Show/hide
Query:  MGFETLAS-YLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLP---------PPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFT
        MG   L+S YLFSLLIA   L+LP+KL A  +H S  TN + Y  PP PLP         PPP +C Q APPP   +N+ K     SPP  M  W R+FT
Subjt:  MGFETLAS-YLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLP---------PPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFT

Query:  PKSPPPPF
          SPPPPF
Subjt:  PKSPPPPF

A0A6J1JSJ5 extensin-like1.2e-0951.43Show/hide
Query:  MGFETLAS-YLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLP------PPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKS
        MG   LAS YLFSLLIA   L+LP+KL A  +H S  TN + Y  PP P P      PPP +C Q APPP K ++K K     SPP  M  W R+FT  S
Subjt:  MGFETLAS-YLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLP------PPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTGAAACATTGGCCTCCTATCTTTTCTCCCTTCTCATTGCATTTTTCTTTTTAAATCTCCCAACCAAATTGACTGCACATTACATTCACAAATCTTCATCCAC
CAACCTTTATGGATATGGAGCTCCTCCCCTGCCACTGCCACCGCCACCTCCGATATGCAGGCAAGGCGCACCACCGCCAGCCAAGAAACAAAACAAATTGAAGCAGCTGC
CATCGTTGTCGCCACCACCACCCATGTTCAAATGGCCACGAAGGTTTACCCCTAAATCACCTCCGCCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTGAAACATTGGCCTCCTATCTTTTCTCCCTTCTCATTGCATTTTTCTTTTTAAATCTCCCAACCAAATTGACTGCACATTACATTCACAAATCTTCATCCAC
CAACCTTTATGGATATGGAGCTCCTCCCCTGCCACTGCCACCGCCACCTCCGATATGCAGGCAAGGCGCACCACCGCCAGCCAAGAAACAAAACAAATTGAAGCAGCTGC
CATCGTTGTCGCCACCACCACCCATGTTCAAATGGCCACGAAGGTTTACCCCTAAATCACCTCCGCCTCCTTTCTAA
Protein sequenceShow/hide protein sequence
MGFETLASYLFSLLIAFFFLNLPTKLTAHYIHKSSSTNLYGYGAPPLPLPPPPPICRQGAPPPAKKQNKLKQLPSLSPPPPMFKWPRRFTPKSPPPPF