CuGenDBv2

Gene ID	IVF0020138
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Photosystem II reaction center protein Z
Genome location	tig00007088:165676..165864
RNA-Seq Expression	IVF0020138
Synteny	IVF0020138
Gene Ontology terms	GO:0042549 - photosystem II stabilization (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0009539 - photosystem II reaction center (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR002644 - Photosystem II PsbZ, reaction centre IPR036512 - Photosystem II PsbZ superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_004841780.1 photosystem II protein Z [Cucumis melo subsp. melo]

2.98e-31

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

YP_009004041.1 photosystem II protein Z [Cucumis hystrix]

8.55e-31

98.39

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASP+GWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

YP_009430624.1 photosystem II protein z [Gynostemma cardiospermum]

1.22e-30

96.77

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVP+VFASP+GWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

YP_009751987.1 photosystem II subunit Z [Cionosicys macranthus]

1.22e-30

96.77

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASP+GWSGNKN+VFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

YP_010144251.1 photosystem II reaction center Z protein [Poikilospermum lanceolatum]

1.22e-30

96.77

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASP+GWSGNKNVVFSGTSLWIGLVFL+GILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU04 Photosystem II reaction center protein Z

2.9e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

A0A249RXJ9 Photosystem II reaction center protein Z

2.9e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

A0A249RZ13 Photosystem II reaction center protein Z

2.9e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

A0A249RZC1 Photosystem II reaction center protein Z

2.9e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

A0A286NG07 Photosystem II reaction center protein Z

2.9e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

SwissProt top hits

e value

%identity

Alignment

P56790 Photosystem II reaction center protein Z

1.1e-23

95.16

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI+TSSILLISVPVVFASP+GWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Q09MI1 Photosystem II reaction center protein Z

2.5e-23

95.16

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI TSSILLISVPVVFASP+GWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Q32902 Photosystem II reaction center protein Z

8.8e-24

96.77

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASP+GWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Q4VZN6 Photosystem II reaction center protein Z

1.8e-24

98.39

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASP+GWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Q9MTN5 Photosystem II reaction center protein Z

2.0e-23

95.16

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI TSS+LLISVPVVFASPEGWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00300.1 YCF9

8.1e-25

95.16

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI+TSSILLISVPVVFASP+GWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Sequences

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CDS sequence

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ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCGTTGTATTTGCTTCTCCTGAAGGTTGGTCGGGTAACAA
AAATGTTGTATTTTCCGGTACATCATTATGGATTGGATTAGTCTTTCTGGTGGGTATCCTTAATTCTCTTATCTCTTGA

mRNA sequence

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ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCGTTGTATTTGCTTCTCCTGAAGGTTGGTCGGGTAACAA
AAATGTTGTATTTTCCGGTACATCATTATGGATTGGATTAGTCTTTCTGGTGGGTATCCTTAATTCTCTTATCTCTTGA

Protein sequence

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MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

IVF0020138 (gene) of Melon (IVF77) v1 genome