; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020182 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020182
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNuclear transcription factor Y subunit B
Genome locationchr02:728033..730208
RNA-Seq ExpressionIVF0020182
SyntenyIVF0020182
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050888.1 beta-galactosidase 15-like [Cucumis melo var. makuwa]6.75e-86100Show/hide
Query:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
        MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA

Query:  SDKAITFQHHQHGVEDHEYNYEHHQLS
        SDKAITFQHHQHGVEDHEYNYEHHQLS
Subjt:  SDKAITFQHHQHGVEDHEYNYEHHQLS

KAE8653368.1 hypothetical protein Csa_006911 [Cucumis sativus]1.33e-5986.55Show/hide
Query:  NIMGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERI
        N MGENWESLQLPIANVERIMKKI+P+KGKISKEAKK MQECANEFI+FVTSEAAQ+C NENRRTLNGDDIYWAF SLGLDNYAEASS  LLKFREAERI
Subjt:  NIMGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERI

Query:  KASDKAI-TFQHHQHGVED
        KASDKAI TFQ    G ED
Subjt:  KASDKAI-TFQHHQHGVED

XP_004135781.1 nuclear transcription factor Y subunit B-4 [Cucumis sativus]2.62e-6387.18Show/hide
Query:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
        MGENWESLQLPIANVERIMKKI+P+KGKISKEAKK MQECANEFI+FVTSEAAQ+C NENRRTLNGDDIYWAF SLGLDNYAEASS  LLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA

Query:  SDKAI-TFQHHQHGVED
        SDKAI TFQ    G ED
Subjt:  SDKAI-TFQHHQHGVED

XP_008451143.1 PREDICTED: beta-galactosidase 15-like [Cucumis melo]3.68e-7099.15Show/hide
Query:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
        MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA

Query:  SDKAITFQHHQHGVEDHE
        SDKAITFQHHQHGVEDH+
Subjt:  SDKAITFQHHQHGVEDHE

XP_038880507.1 nuclear transcription factor Y subunit B-4-like [Benincasa hispida]1.05e-5977.34Show/hide
Query:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
        MGENWE+LQLPIANV RIMKKI+PQK KISKEAK+TMQECA+EFISFV SEAA+KCH ENRRTLNGDDI WA GS GLDNYAE S+  LLKFREAERIK 
Subjt:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA

Query:  SDKAITFQH-HQHGVEDHEYNYEHHQLS
        S+KAITFQH HQ G +D   + + HQLS
Subjt:  SDKAITFQH-HQHGVEDHEYNYEHHQLS

TrEMBL top hitse value%identityAlignment
A0A0A0LW12 CBFD_NFYB_HMF domain-containing protein1.2e-3982.86Show/hide
Query:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKASDKAI
        E L+LPIANVERIMKKIIPQKGKISKEAKK MQECANEFISFVTSEAAQ+C NENRRTLNGDDIYWAFGSLGLDNYAEASS  LL FRE ERIK  +K  
Subjt:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKASDKAI

Query:  TFQHH
        +  +H
Subjt:  TFQHH

A0A0A0LZ17 CBFD_NFYB_HMF domain-containing protein1.6e-4787.18Show/hide
Query:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
        MGENWESLQLPIANVERIMKKI+P+KGKISKEAKK MQECANEFI+FVTSEAAQ+C NENRRTLNGDDIYWAF SLGLDNYAEASS  LLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA

Query:  SDKA-ITFQHHQHGVED
        SDKA ITFQ    G ED
Subjt:  SDKA-ITFQHHQHGVED

A0A1S3BQ87 Beta-galactosidase4.0e-5999.15Show/hide
Query:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
        MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA

Query:  SDKAITFQHHQHGVEDHE
        SDKAITFQHHQHGVEDH+
Subjt:  SDKAITFQHHQHGVEDHE

A0A5A7U6S7 Nuclear transcription factor Y subunit B-44.7e-3682.47Show/hide
Query:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKASD
        E L+LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQ+CH ENRRTLNGDDI WAF S GLDNYAE  +  LLK+RE ERIK  +
Subjt:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKASD

A0A5D3CFV4 Beta-galactosidase 15-like6.3e-65100Show/hide
Query:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
        MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKA

Query:  SDKAITFQHHQHGVEDHEYNYEHHQLS
        SDKAITFQHHQHGVEDHEYNYEHHQLS
Subjt:  SDKAITFQHHQHGVEDHEYNYEHHQLS

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-43.1e-2967.39Show/hide
Query:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAER
        E   LPIANV R+MK+I+P   KISKEAK+T+QECA EFISFVT EA++KCH ENR+T+NGDDI+WA  +LGLDNYA+A    L K+REAER
Subjt:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAER

P25207 Nuclear transcription factor Y subunit beta1.4e-2457.78Show/hide
Query:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREA
        + + LPIANV RIMK  IPQ GKI+K+AK+ +QEC +EFISF+TSEA+++CH E R+T+NG+DI +A  +LG D+Y E   + L KFREA
Subjt:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREA

P25208 Nuclear transcription factor Y subunit beta1.4e-2457.78Show/hide
Query:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREA
        + + LPIANV RIMK  IPQ GKI+K+AK+ +QEC +EFISF+TSEA+++CH E R+T+NG+DI +A  +LG D+Y E   + L KFREA
Subjt:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREA

Q32KW0 Nuclear transcription factor Y subunit beta1.4e-2457.78Show/hide
Query:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREA
        + + LPIANV RIMK  IPQ GKI+K+AK+ +QEC +EFISF+TSEA+++CH E R+T+NG+DI +A  +LG D+Y E   + L KFREA
Subjt:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREA

Q6RG77 Nuclear transcription factor Y subunit beta1.4e-2457.78Show/hide
Query:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREA
        + + LPIANV RIMK  IPQ GKI+K+AK+ +QEC +EFISF+TSEA+++CH E R+T+NG+DI +A  +LG D+Y E   + L KFREA
Subjt:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREA

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B42.2e-3067.39Show/hide
Query:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAER
        E   LPIANV R+MK+I+P   KISKEAK+T+QECA EFISFVT EA++KCH ENR+T+NGDDI+WA  +LGLDNYA+A    L K+REAER
Subjt:  ESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAER

AT2G38880.2 nuclear factor Y, subunit B11.4e-2456.32Show/hide
Query:  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAE
        LPIAN+ RIMKK +P  GKI K+AK T+QEC +EFISF+TSEA+ KC  E R+T+NGDD+ WA  +LG ++Y E   + L ++RE E
Subjt:  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAE

AT3G53340.1 nuclear factor Y, subunit B108.2e-2556.32Show/hide
Query:  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAE
        LPIAN+ RIMK+ +P  GKI+K+AK+TMQEC +EFISFVTSEA+ KC  E R+T+NGDD+ WA  +LG ++Y +   + L+++RE E
Subjt:  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAE

AT4G14540.1 nuclear factor Y, subunit B38.2e-2555.43Show/hide
Query:  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKAS
        LPIANV RIMKK +P   KISK+AK+T+QEC +EFISF+T EA+ KC  E R+T+NGDD+ WA  +LG ++Y E   + L K+RE E  K +
Subjt:  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKAS

AT5G47640.1 nuclear factor Y, subunit B24.8e-2559.77Show/hide
Query:  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAE
        LPIANV RIMKK +P   KISK+AK+TMQEC +EFISFVT EA+ KC  E R+T+NGDD+ WA  +LG ++Y E   + L +FRE E
Subjt:  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACAATCGGAAATTCCTTCAAATGAAGAATATTATGGGAGAGAATTGGGAAAGTCTTCAACTACCAATTGCCAATGTTGAGAGAATAATGAAGAAGATAATTCC
ACAAAAGGGGAAGATTTCAAAAGAAGCCAAGAAGACAATGCAAGAATGTGCAAATGAGTTCATCAGCTTTGTAACAAGTGAAGCAGCACAAAAATGTCACAATGAGAACA
GAAGAACTCTCAATGGTGATGATATCTATTGGGCATTTGGTTCTCTTGGCCTAGATAATTATGCTGAGGCTTCTTCCATGCTCTTGCTTAAGTTTAGAGAAGCTGAGAGA
ATCAAAGCTTCTGATAAAGCTATTACTTTCCAACATCATCAACATGGAGTAGAGGATCATGAGTACAATTATGAACATCATCAATTATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAACAATCGGAAATTCCTTCAAATGAAGAATATTATGGGAGAGAATTGGGAAAGTCTTCAACTACCAATTGCCAATGTTGAGAGAATAATGAAGAAGATAATTCC
ACAAAAGGGGAAGATTTCAAAAGAAGCCAAGAAGACAATGCAAGAATGTGCAAATGAGTTCATCAGCTTTGTAACAAGTGAAGCAGCACAAAAATGTCACAATGAGAACA
GAAGAACTCTCAATGGTGATGATATCTATTGGGCATTTGGTTCTCTTGGCCTAGATAATTATGCTGAGGCTTCTTCCATGCTCTTGCTTAAGTTTAGAGAAGCTGAGAGA
ATCAAAGCTTCTGATAAAGCTATTACTTTCCAACATCATCAACATGGAGTAGAGGATCATGAGTACAATTATGAACATCATCAATTATCATAA
Protein sequenceShow/hide protein sequence
MGNNRKFLQMKNIMGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAER
IKASDKAITFQHHQHGVEDHEYNYEHHQLS