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IVF0020186 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020186
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhloem lectin
Genome locationchr12:17652051..17652430
RNA-Seq ExpressionIVF0020186
SyntenyIVF0020186
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047060.1 protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis melo var. makuwa]9.98e-0733.05Show/hide
Query:  ITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFAL--PSQK--------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLACIPQRGS-K
        ++WL+A GKI+++MLS  + Y+VL  LL+KP  +G+ +P  F L  P  K        + +PR      K G+ +         T+    +     G  K
Subjt:  ITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFAL--PSQK--------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLACIPQRGS-K

Query:  SGLIFKGIHIRPKQPSYG
        + +I KG  IRPKQ S G
Subjt:  SGLIFKGIHIRPKQPSYG

KAA0047061.1 protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis melo var. makuwa]1.47e-3761.42Show/hide
Query:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQKQRK----------PRVFGLRSKWGKSRSKINMIVTVTRSTSLACIP
        MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFAL   K  K          PR      K G+ + +        +    +   
Subjt:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQKQRK----------PRVFGLRSKWGKSRSKINMIVTVTRSTSLACIP

Query:  Q-RGSKSGLIFKGIHIRPKQPSYGSSS
             KSGLIFKGIHIRPKQPSYGSSS
Subjt:  Q-RGSKSGLIFKGIHIRPKQPSYGSSS

KAE8653329.1 hypothetical protein Csa_023191 [Cucumis sativus]9.87e-2045.9Show/hide
Query:  EITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQK----------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLAC-IPQRGS
        EIT+LEA GKI+QHMLSSTLTYDVLFELL KPY TG+  PT F +   K          + +P       K G+ +          +    +  I     
Subjt:  EITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQK----------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLAC-IPQRGS

Query:  KSGLIFKGIHIRPKQPSYGSSS
        KS L+FKG+ IRPKQPSYG+SS
Subjt:  KSGLIFKGIHIRPKQPSYGSSS

XP_004135557.1 lectin [Cucumis sativus]5.47e-2145.67Show/hide
Query:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQK----------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLAC-I
        +A F EIT+LEA GKI+QHMLSSTLTYDVLFELL KPY TG+  PT F +   K          + +P       K G+ +          +    +  I
Subjt:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQK----------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLAC-I

Query:  PQRGSKSGLIFKGIHIRPKQPSYGSSS
             KS L+FKG+ IRPKQPSYG+SS
Subjt:  PQRGSKSGLIFKGIHIRPKQPSYGSSS

XP_008465823.1 PREDICTED: uncharacterized protein LOC103503413, partial [Cucumis melo]1.17e-2691.23Show/hide
Query:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQKQRK
        MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFAL   K  K
Subjt:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQKQRK

TrEMBL top hitse value%identityAlignment
A0A0A0LW08 Phloem lectin2.0e-1645.67Show/hide
Query:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQK----------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLAC-I
        +A F EIT+LEA GKI+QHMLSSTLTYDVLFELL KPY TG+  PT F +   K          + +P       K G+ +          +    +  I
Subjt:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQK----------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLAC-I

Query:  PQRGSKSGLIFKGIHIRPKQPSYGSSS
             KS L+FKG+ IRPKQPSYG+SS
Subjt:  PQRGSKSGLIFKGIHIRPKQPSYGSSS

A0A1S3CPT4 uncharacterized protein LOC1035034131.1e-1991.23Show/hide
Query:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQKQRK
        MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFAL   K  K
Subjt:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQKQRK

A0A5D3BZV6 Protein PHLOEM PROTEIN 2-LIKE A1-like1.0e-0433.05Show/hide
Query:  ITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFAL--PSQK--------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLACIPQRGS-K
        ++WL+A GKI+++MLS  + Y+VL  LL+KP  +G+ +P  F L  P  K        + +PR      K G+ +         T+    +     G  K
Subjt:  ITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFAL--PSQK--------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLACIPQRGS-K

Query:  SGLIFKGIHIRPKQPSYG
        + +I KG  IRPKQ S G
Subjt:  SGLIFKGIHIRPKQPSYG

A0A5D3C3U2 Protein PHLOEM PROTEIN 2-LIKE A1-like3.0e-2860.63Show/hide
Query:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQK----------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLACI-
        MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFAL   K          + +PR      K G+ + +        +    +   
Subjt:  MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQK----------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLACI-

Query:  PQRGSKSGLIFKGIHIRPKQPSYGSSS
             KSGLIFKGIHIRPKQPSYGSSS
Subjt:  PQRGSKSGLIFKGIHIRPKQPSYGSSS

Q8LK97 26 kDa phloem lectin1.0e-0433.05Show/hide
Query:  ITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFAL--PSQK--------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLACIPQRGS-K
        ++WL+A GKI+++MLS  + Y+VL  LL+KP  +G+ +P  F L  P  K        + +PR      K G+ +         T+    +     G  K
Subjt:  ITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFAL--PSQK--------QRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLACIPQRGS-K

Query:  SGLIFKGIHIRPKQPSYG
        + +I KG  IRPKQ S G
Subjt:  SGLIFKGIHIRPKQPSYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGTTTAAAGAAATAACTTGGCTAGAAGCACATGGGAAGATCAGGCAACATATGCTTTCATCTACCCTTACATATGACGTATTGTTTGAACTTCTGATAAAGCC
TTATGTCACTGGATTTATTAAACCTACTACCTTTGCATTACCTTCCCAAAAGCAGCGAAAACCACGAGTATTTGGTTTACGATCAAAGTGGGGGAAATCAAGGTCGAAGA
TAAACATGATTGTGACAGTGACAAGGAGTACGAGTTTAGCATGTATACCACAGCGAGGATCGAAATCGGGATTGATCTTTAAAGGTATTCACATTCGACCAAAGCAACCA
AGTTATGGAAGCTCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGTTTAAAGAAATAACTTGGCTAGAAGCACATGGGAAGATCAGGCAACATATGCTTTCATCTACCCTTACATATGACGTATTGTTTGAACTTCTGATAAAGCC
TTATGTCACTGGATTTATTAAACCTACTACCTTTGCATTACCTTCCCAAAAGCAGCGAAAACCACGAGTATTTGGTTTACGATCAAAGTGGGGGAAATCAAGGTCGAAGA
TAAACATGATTGTGACAGTGACAAGGAGTACGAGTTTAGCATGTATACCACAGCGAGGATCGAAATCGGGATTGATCTTTAAAGGTATTCACATTCGACCAAAGCAACCA
AGTTATGGAAGCTCTAGTTAA
Protein sequenceShow/hide protein sequence
MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALPSQKQRKPRVFGLRSKWGKSRSKINMIVTVTRSTSLACIPQRGSKSGLIFKGIHIRPKQP
SYGSSS