; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020188 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020188
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein-like protein
Genome locationchr03:1096720..1097594
RNA-Seq ExpressionIVF0020188
SyntenyIVF0020188
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138634.1 uncharacterized protein LOC101215025 [Cucumis sativus]9.40e-10095.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDD--DNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDD D D  DNHNLIPEKNEKEVRARRKLKDLFVSSP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDD--DNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLEDRLSDRRIEEQE F+TS NTNAAGI SPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

XP_008441261.1 PREDICTED: uncharacterized protein LOC103485443 [Cucumis melo]8.49e-107100Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
        MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP

Query:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Subjt:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

XP_022939119.1 uncharacterized protein LOC111445119 [Cucurbita moschata]5.22e-8784.57Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
        MATLHKFKLLASQCAVAG PT+SP ASP+ HLRRRRRKTLRMLLNR DRRRFP+QDNSAD QD+DDDDDDD+ N+IPEKN+KEVRARRKLKDLFVSSPP 
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP

Query:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        LED++SDRRIEEQE  +T+ANT+AAGIG+PS TRRSLRP+SATFRYRFLRRAWRPVLV IPE
Subjt:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

XP_022993370.1 uncharacterized protein LOC111489414 [Cucurbita maxima]9.03e-8885.19Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
        MATLHKFKLLASQCAVAG PT+SP ASP+ HLRRRRRKTLRMLLNRTDRRRFP+QDNSAD QD+DDDDDDD+ N+IPEKN+KEVRARRKLKDLFVSSPP 
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP

Query:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        LED++SDRRIEEQE  +T+ANT+AAGIG+PS TRRSLRP+SATFRYRFLRRAWRPVLV IPE
Subjt:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

XP_038885993.1 uncharacterized protein LOC120076298 [Benincasa hispida]4.88e-9289.51Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
        MATLHKFKLLASQCAVAGSPTRSPNASP+IHLRRRRRKTLRMLLNRTDRRRFP+QDNSADSQD+DDDDDD +  +IPEKNEKEVRARRKLKDLFVSSPP 
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP

Query:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        LED++SDRRIEE+E F+T+ANT+AAGIGSPSTTRRSLRP+SATFRYRFLRRAWRPVLVAIPE
Subjt:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

TrEMBL top hitse value%identityAlignment
A0A0A0LQR3 Uncharacterized protein1.2e-7595.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLD--DDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLD  D D DDNHNLIPEKNEKEVRARRKLKDLFVSSP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLD--DDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLEDRLSDRRIEEQE F+TS NTNAAGI SPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

A0A1S3B320 uncharacterized protein LOC1034854435.6e-81100Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
        MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP

Query:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Subjt:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

A0A5D3C5R9 Protein PCF11-like5.6e-81100Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
        MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP

Query:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Subjt:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

A0A6J1FG66 uncharacterized protein LOC1114451195.1e-6684.57Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
        MATLHKFKLLASQCAVAG PT+SP ASP+ HLRRRRRKTLRMLLNR DRRRFP+QDNSAD QD+DDDDDDD+ N+IPEKN+KEVRARRKLKDLFVSS PP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP

Query:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        LED++SDRRIEEQE  +T+ANT+AAGIG+PS TRRSLRP+SATFRYRFLRRAWRPVLV IPE
Subjt:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

A0A6J1JYC4 uncharacterized protein LOC1114894141.3e-6685.19Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
        MATLHKFKLLASQCAVAG PT+SP ASP+ HLRRRRRKTLRMLLNRTDRRRFP+QDNSAD QD+DDDDDDD+ N+IPEKN+KEVRARRKLKDLFVSS PP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP

Query:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        LED++SDRRIEEQE  +T+ANT+AAGIG+PS TRRSLRP+SATFRYRFLRRAWRPVLV IPE
Subjt:  LEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown9.2e-2044Show/hide
Query:  TLHKFKLLASQCA-VAGSPTRSPNASPLIHLRRRRRKTLRMLLNR-TDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP
        +L KFKLLA+ C+ VA SPTR    SP+IHL  RRRKTLR+LL R +DR R P   N+ D     D                ++R+ RKL DLFVSSPP 
Subjt:  TLHKFKLLASQCA-VAGSPTRSPNASPLIHLRRRRRKTLRMLLNR-TDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPP

Query:  LE-------DRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRR-----SLRPVSA-TFRYRFLRRAWRPVLVAIPE
         E       D+ +   +E + +   +  +N AG G   T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Subjt:  LE-------DRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRR-----SLRPVSA-TFRYRFLRRAWRPVLVAIPE

AT1G68430.1 unknown protein2.3e-1036.53Show/hide
Query:  MATLHKFKLLASQCAVAG-SPTRSPN--ASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSS
        MATL +FK L +QC VA  SPTRSP+   SPL+ L RR++ TL+MLL+     R   Q                    +   + K+V A RKLKDLFVSS
Subjt:  MATLHKFKLLASQCAVAG-SPTRSPN--ASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSS

Query:  PPPLEDRLSDRRI--EEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
            E++  D R   + +EE + +                   PV   F  R L+RAWRP L  I E
Subjt:  PPPLEDRLSDRRI--EEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

AT5G16200.1 50S ribosomal protein-related1.8e-1539.05Show/hide
Query:  MATLHKFKLLAS----QCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNR-TDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFV
        ++ LHKFKL A+    + + AGSPT SP  SP+ +L  RRRKTLRML ++ +D RR   +    +S + D +  +       +K       RRKL++L V
Subjt:  MATLHKFKLLAS----QCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNR-TDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFV

Query:  SSP-PPLEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSA-TFRYRFLRRAWRPVLVAIPE
        +SP PP + R     I E+   ++  N  + G G   T RR     S  +FR R LR+ WRPVLV+IPE
Subjt:  SSP-PPLEDRLSDRRIEEQEEFVTSANTNAAGIGSPSTTRRSLRPVSA-TFRYRFLRRAWRPVLVAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTTTGCATAAATTCAAACTCTTAGCTTCTCAATGTGCCGTCGCTGGTAGCCCTACTCGAAGCCCCAACGCTAGTCCCCTCATTCATCTCCGTCGTCGCCGCCG
TAAAACCCTAAGAATGCTCCTTAATCGCACCGATCGCCGCCGATTTCCCTTCCAAGATAACTCCGCCGATTCCCAAGATCTCGACGACGACGACGACGACGATAACCACA
ATTTGATTCCGGAGAAAAACGAGAAGGAGGTTCGAGCCAGACGAAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCCGCTTGAGGATAGGCTCTCCGATAGGAGAATC
GAAGAACAGGAGGAATTCGTAACGTCGGCCAACACTAACGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTAAGACCTGTATCGGCGACATTCCGGTACAG
ATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
CTGCTCTCCTCTTCTCTCTCTCTCCACTCCAAAGAGTAAAGAACCCCTAAAACTCAACAAAAAAAAAGGATCCAAAATTCACATCACACACTTCTTCTTACTTCTTCTCA
CTTCTCACCCCTAATTCATTCAGATTCTTCAGATCTCTCTCTCTCATACACTCTCCTCAATTTCTTATTCCAATTTTCAGTTCTCTACACAACACAATTAACCAACGAAT
CTCCCAAATCTCATTCTCCCATGGCTACTTTGCATAAATTCAAACTCTTAGCTTCTCAATGTGCCGTCGCTGGTAGCCCTACTCGAAGCCCCAACGCTAGTCCCCTCATT
CATCTCCGTCGTCGCCGCCGTAAAACCCTAAGAATGCTCCTTAATCGCACCGATCGCCGCCGATTTCCCTTCCAAGATAACTCCGCCGATTCCCAAGATCTCGACGACGA
CGACGACGACGATAACCACAATTTGATTCCGGAGAAAAACGAGAAGGAGGTTCGAGCCAGACGAAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCCGCTTGAGGATA
GGCTCTCCGATAGGAGAATCGAAGAACAGGAGGAATTCGTAACGTCGGCCAACACTAACGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTAAGACCTGTA
TCGGCGACATTCCGGTACAGATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAGAAGATGCTCCTCTCCGGTAAAATCTGTACGAAGAAATTCCA
TAATTTTTGCCTTAATTATTATTATTATTAATTTTTTCTTTTAATAATTTTCATAACATTTTTTCCCTAATAAATTCCGACAAGTCGTCTAGCCGTGGGGAGGAG
Protein sequenceShow/hide protein sequence
MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRI
EEQEEFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE