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IVF0020204 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020204
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr05:6984377..6985120
RNA-Seq ExpressionIVF0020204
SyntenyIVF0020204
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032021.1 Gag-pro-like protein [Cucumis melo var. makuwa]2.21e-150100Show/hide
Query:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL
        MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL
Subjt:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL

Query:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP
        ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP
Subjt:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP

Query:  ASRWYMQFDGSQVH
        ASRWYMQFDGSQVH
Subjt:  ASRWYMQFDGSQVH

KAA0046607.1 Gag-pro-like protein [Cucumis melo var. makuwa]6.41e-14088.65Show/hide
Query:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDP
        MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAG SSQVEVDLNQVLEDM  YPPGFTPQ+SSSPR+ D TYPT     NPNTTTQQA H ++P
Subjt:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDP

Query:  ISTLITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDS
        IST I EG KKISEEQGSRRR+EFLEERLR IEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT+CPKSHLVMYCRKMSAYAHDDKLLI CFQDS
Subjt:  ISTLITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDS

Query:  LVGPASRWYMQFDGSQVHRWKDLADSFLK
        LVGPASRWYMQ DGSQVHRWKDLADSF K
Subjt:  LVGPASRWYMQFDGSQVHRWKDLADSFLK

TYK06464.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.30e-13988.31Show/hide
Query:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL
        MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDM  YPPGFTPQ+SSSPR+   TYPTQNPN  TQQA HVSDP+ST 
Subjt:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL

Query:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP
        ITE GKKISEEQGSR+R+EFLEERLRAI+GADMYGSIDA QLCLISDVVIP KFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLI C QD+LVG 
Subjt:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP

Query:  ASRWYMQFDGSQVHRWKDLADSFLKKYKYNI
         SR YMQ DGSQVHRWKDLADSFLK+YKYNI
Subjt:  ASRWYMQFDGSQVHRWKDLADSFLKKYKYNI

XP_008447676.1 PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo]2.39e-13787.45Show/hide
Query:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL
        MDEQ+NDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDM  YPPGFTPQ+SSSPR+   TY TQNPN  TQQ  HVSDP+ST 
Subjt:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL

Query:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP
        ITE GKKI EEQGSR+R+EF+EERLRAIEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYCRKMSAYA+DDKLLI CFQDSLVGP
Subjt:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP

Query:  ASRWYMQFDGSQVHRWKDLADSFLKKYKYNI
         SRWYMQ DGSQVHRWKDLADSFLK+YKYNI
Subjt:  ASRWYMQFDGSQVHRWKDLADSFLKKYKYNI

XP_016902756.1 PREDICTED: uncharacterized protein LOC107991868 [Cucumis melo]7.11e-13887.88Show/hide
Query:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL
        MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDM  YP GFTPQ+SSSPR+   TYPTQNPN  TQQA HVSDP+ST 
Subjt:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL

Query:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP
        ITE GKKISEEQGSR+R+EFLEERLRAI+GADMYGSIDA QLCLISDVVIP KFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLI C QD+LVG 
Subjt:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP

Query:  ASRWYMQFDGSQVHRWKDLADSFLKKYKYNI
         SR YMQ DGSQVHRWKDLADSFLK+YKYNI
Subjt:  ASRWYMQFDGSQVHRWKDLADSFLKKYKYNI

TrEMBL top hitse value%identityAlignment
A0A5A7SR42 Gag-pro-like protein3.3e-117100Show/hide
Query:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL
        MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL
Subjt:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL

Query:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP
        ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP
Subjt:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP

Query:  ASRWYMQFDGSQVH
        ASRWYMQFDGSQVH
Subjt:  ASRWYMQFDGSQVH

A0A5A7TXF2 Gag-pro-like protein2.5e-10988.65Show/hide
Query:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDP
        MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAG SSQVEVDLNQVLEDM  YPPGFTPQ+SSSPR+ D TYPT     NPNTTTQQA H ++P
Subjt:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDP

Query:  ISTLITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDS
        IST I EG KKISEEQGSRRR+EFLEERLR IEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT+CPKSHLVMYCRKMSAYAHDDKLLI CFQDS
Subjt:  ISTLITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDS

Query:  LVGPASRWYMQFDGSQVHRWKDLADSFLK
        LVGPASRWYMQ DGSQVHRWKDLADSF K
Subjt:  LVGPASRWYMQFDGSQVHRWKDLADSFLK

A0A5A7V681 Retrotrans_gag domain-containing protein1.2e-11489.36Show/hide
Query:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDP
        MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAG SSQVEVDLNQVLEDM  YPPGFTPQ+SSSPR+ DRTYPT     NPNTTTQQ  H ++P
Subjt:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDP

Query:  ISTLITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDS
        ISTLI EGGKKISEEQGSRRR+EFLEERLR IEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT+CPKSHLVMYCRKMSAYAHDDKLLI CFQD+
Subjt:  ISTLITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDS

Query:  LVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNI
        LVGPASRWYMQ DGSQVHRWKDLADSFLK+YKYNI
Subjt:  LVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNI

A0A5A7VAU5 Uncharacterized protein1.4e-11590.21Show/hide
Query:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDP
        MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV G SSQVEVDLNQVLEDM TYPPGFTPQ+SSSPR+ DRTYPT     NPNTTTQQA H ++P
Subjt:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDP

Query:  ISTLITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDS
        ISTLI EGGKKISEEQGSRRR+EFLEERLR IEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT+CPKSHLVMYCRKMSAYAHDDKLLI CFQDS
Subjt:  ISTLITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDS

Query:  LVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNI
        LVGPASRWYMQ DGSQVHRWKDLADSFLK+YKYNI
Subjt:  LVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNI

A0A5D3C562 Gag-pro-like protein7.4e-10988.31Show/hide
Query:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL
        MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDM  YPPGFTPQ+SSSPR+   TYPTQNPN  TQQA HVSDP+ST 
Subjt:  MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTL

Query:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP
        ITE GKKISEEQGSR+R+EFLEERLRAI+GADMYGSIDA QLCLISDVVIP KFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLI C QD+LVG 
Subjt:  ITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGP

Query:  ASRWYMQFDGSQVHRWKDLADSFLKKYKYNI
         SR YMQ DGSQVHRWKDLADSFLK+YKYNI
Subjt:  ASRWYMQFDGSQVHRWKDLADSFLKKYKYNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCAAAGTAATGATCAGGTTCAAGCAGTTCGTCAAGATGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTCCTCACTACTGGAAGAGGAAAGAG
TGTTGCAGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTACTAGAGGACATGACTACATACCCTCCAGGTTTTACTCCTCAACAGTCATCTAGTCCTCGCATAG
TGGATAGGACTTATCCTACACAAAATCCTAACACAACCACCCAACAAGCAGTCCATGTGAGTGATCCCATATCTACTCTAATTACGGAAGGTGGTAAGAAAATTTCAGAA
GAGCAGGGTAGTAGAAGAAGAATGGAATTTCTAGAAGAAAGACTGCGCGCCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGA
TGTGGTGATCCCTCCTAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCACTTGTCCAAAAAGTCACCTAGTTATGTACTGTCGAAAAATGTCAGCTTACGCTC
ATGATGATAAATTGTTGATTTGTTGCTTCCAAGACAGCTTAGTTGGCCCCGCTTCTCGATGGTACATGCAGTTTGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCC
GATTCATTCTTAAAAAAATATAAGTACAACATTTTTAAAAAGAACTTTGTAGTTGTTACAATTGTTCTAAAGTGCTACAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCAAAGTAATGATCAGGTTCAAGCAGTTCGTCAAGATGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTCCTCACTACTGGAAGAGGAAAGAG
TGTTGCAGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTACTAGAGGACATGACTACATACCCTCCAGGTTTTACTCCTCAACAGTCATCTAGTCCTCGCATAG
TGGATAGGACTTATCCTACACAAAATCCTAACACAACCACCCAACAAGCAGTCCATGTGAGTGATCCCATATCTACTCTAATTACGGAAGGTGGTAAGAAAATTTCAGAA
GAGCAGGGTAGTAGAAGAAGAATGGAATTTCTAGAAGAAAGACTGCGCGCCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGA
TGTGGTGATCCCTCCTAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCACTTGTCCAAAAAGTCACCTAGTTATGTACTGTCGAAAAATGTCAGCTTACGCTC
ATGATGATAAATTGTTGATTTGTTGCTTCCAAGACAGCTTAGTTGGCCCCGCTTCTCGATGGTACATGCAGTTTGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCC
GATTCATTCTTAAAAAAATATAAGTACAACATTTTTAAAAAGAACTTTGTAGTTGTTACAATTGTTCTAAAGTGCTACAAATGA
Protein sequenceShow/hide protein sequence
MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISE
EQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLA
DSFLKKYKYNIFKKNFVVVTIVLKCYK