; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020263 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020263
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L18, putative
Genome locationchr02:576105..583229
RNA-Seq ExpressionIVF0020263
SyntenyIVF0020263
Gene Ontology termsGO:0001731 - formation of translation preinitiation complex (biological process)
GO:0043086 - negative regulation of catalytic activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004857 - enzyme inhibitor activity (molecular function)
InterPro domainsIPR000039 - Ribosomal protein L18e
IPR002478 - PUA domain
IPR004521 - Uncharacterised domain CHP00451
IPR015947 - PUA-like superfamily
IPR021131 - Ribosomal protein L18e/L15P
IPR036227 - Ribosomal L18e/L15P superfamily
IPR036974 - PUA domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF49907.1 60S ribosomal protein L18, putative [Ricinus communis]1.14e-16681.43Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK--------------
        M+KLQVDRGAIKFVLAGANIMCPGLTSPGG LD+EVEAETPVAIMAEGKQHALAIGFTKMSAK+I+  NKGIGVDNMHYLNDGLWK              
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK--------------

Query:  ---------------------GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAV
                             GIDL AGGKSKKTKR APKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSK+NK PLSLSRLI FMKGKESK AV
Subjt:  ---------------------GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAV

Query:  VVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
        VVGT+TDDIRVYEVPALKV AL+FTETARARIEKAGGECLTFDQLA+RAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERARG+R
Subjt:  VVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR

Query:  NSRGYRV
        NSRG+RV
Subjt:  NSRGYRV

KAB1202145.1 60S ribosomal protein L18-3 [Morella rubra]9.21e-17592.28Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK
        M+KLQVDRGAIKFVLAGANIMCPGLTSPGG LD++V AETPVAIMAEGK+HALAIGFTKMSAK+I+A NKGIGVDNMHYLNDGLWKGIDLVAGGKSKK+K
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK

Query:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA
        R APKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLI++MKGK+ KIAVVVGT+TDDIRVYEVPALKV ALRFTETARARIEKA
Subjt:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA

Query:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        GGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFERARGKRNSRG+RV
Subjt:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

KAF9681543.1 hypothetical protein SADUNF_Sadunf05G0012500 [Salix dunnii]2.72e-16988.26Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK
        M+KLQVDRGAIKFVLAGANIMCPGLTS GGVLDDEV+AETPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWKGIDL  GGKSKKTK
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK

Query:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA
        R APKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSK+NK PLSLSRLI FMKGKE+KIAV+VGT+TDDIRVYEVPALKV ALRFTE ARARIEKA
Subjt:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA

Query:  GGECLTFDQLALRAPLGQNT---------VLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        GGECLTFDQLALRAPLGQNT         VLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKRNSRG+RV
Subjt:  GGECLTFDQLALRAPLGQNT---------VLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

OWM72463.1 hypothetical protein CDL15_Pgr018348 [Punica granatum]1.19e-17192.28Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK
        M+KLQVDRGAIKFVLAGANIMCPGLTSPGG LDD+VE+ETPVAIMAEGKQHALAIGFTKMSAK+IRA NKGIGVDNMHYLNDGLWKGIDL AGGKSKKT+
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK

Query:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA
        R APKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSKVNKPPLSLSRLI++M GK+ KIAVVVGT+TDDIRVYEVPALKV ALRFTETARARIEKA
Subjt:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA

Query:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        GGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERARG+RNSRG+RV
Subjt:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

RAL52647.1 hypothetical protein DM860_007415 [Cuscuta australis]2.95e-17188.6Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK
        M+KLQVDRGAIKFVL+GANIMCPGLTSPGGVLD+EVEAETPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWKGIDL AGGKSK+TK
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK

Query:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA
        R APKS+D+YLKLLVKLYRFLVRRTGS FNAV+LKRLFMSK N+PPLSLSRLI FM GKE KIAV+VGTITDD+RVYEVPA+KV ALRFT+TARARIEKA
Subjt:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA

Query:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        GGECLTFDQLALRAPLGQNT+LLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFE+ARG+RNSRGY+ 
Subjt:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

TrEMBL top hitse value%identityAlignment
A0A218WIU0 PUA domain-containing protein2.2e-13892.28Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK
        M+KLQVDRGAIKFVLAGANIMCPGLTSPGG LDD+VE+ETPVAIMAEGKQHALAIGFTKMSAK+IRA NKGIGVDNMHYLNDGLWKGIDL AGGKSKKT+
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK

Query:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA
        R APKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSKVNKPPLSLSRLI++M GK+ KIAVVVGT+TDDIRVYEVPALKV ALRFTETARARIEKA
Subjt:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA

Query:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        GGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERARG+RNSRG+RV
Subjt:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

A0A328E3X4 PUA domain-containing protein5.0e-13588.93Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK
        M+KLQVDRGAIKFVL+GANIMCPGLTSPGGVLD+EVEAETPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWKGIDL AGGKSK+TK
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK

Query:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA
        R APKS+D+YLKLLVKLYRFLVRRTGS FNAV+LKRLFMSK N+PPLSLSRLI FM GKE KIAV+VGTITDD+RVYEVPA+KV ALRFT+TARARIEKA
Subjt:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA

Query:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYR
        GGECLTFDQLALRAPLGQNT+LLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFE+ARG+RNSRGY+
Subjt:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYR

A0A5N5MMN8 PUA domain-containing protein1.0e-13590.81Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK
        M+KLQVDRGAIKFVLAGANIMCPGLTS GG LDDEV+AETPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWKGIDL  GGKSKKTK
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK

Query:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA
        R APKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSK+NK PLSLSRLI FMKGKE+K AV+VGT+TDDIRVYEVPALKV ALRFTETARARIEKA
Subjt:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA

Query:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKRNS+G+RV
Subjt:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

A0A6A1UNZ6 60S ribosomal protein L18-31.3e-13892.28Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK
        M+KLQVDRGAIKFVLAGANIMCPGLTSPGG LD++V AETPVAIMAEGK+HALAIGFTKMSAK+I+A NKGIGVDNMHYLNDGLWKGIDLVAGGKSKK+K
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTK

Query:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA
        R APKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLI++MKGK+ KIAVVVGT+TDDIRVYEVPALKV ALRFTETARARIEKA
Subjt:  RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKA

Query:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        GGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFERARGKRNSRG+RV
Subjt:  GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

B9RFD6 60S ribosomal protein L18, putative4.0e-13281.43Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK--------------
        M+KLQVDRGAIKFVLAGANIMCPGLTSPGG LD+EVEAETPVAIMAEGKQHALAIGFTKMSAK+I+  NKGIGVDNMHYLNDGLWK              
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK--------------

Query:  ---------------------GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAV
                             GIDL AGGKSKKTKR APKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSK+NK PLSLSRLI FMKGKESK AV
Subjt:  ---------------------GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAV

Query:  VVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
        VVGT+TDDIRVYEVPALKV AL+FTETARARIEKAGGECLTFDQLA+RAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERARG+R
Subjt:  VVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR

Query:  NSRGYRV
        NSRG+RV
Subjt:  NSRGYRV

SwissProt top hitse value%identityAlignment
O22254 Putative 60S ribosomal protein L18-16.7e-7677.01Show/hide
Query:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAA
        GIDL+AGGKSKKTKR  PKSDD+YLKLLVK  R+LVRRT S FNAVILKRLFMSKVNK PLSLSRL+++M GK+ KIAV+VGT+TDD+R+ +VPAL V A
Subjt:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAA

Query:  LRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        LRFTE+ARARI KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR  G+K E ARG+R SRG++V
Subjt:  LRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

O65729 60S ribosomal protein L18 (Fragment)8.1e-8283.7Show/hide
Query:  DLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALR
        DL AGGK+KKTKR +PKS+DIYLKLLVKLYRFLVRRT SNFNAVILKRLFMSKVN+PPLSLSRLI++M+GKE KI VVVG +TDDIRVY+VP +KV AL+
Subjt:  DLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALR

Query:  FTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        FTETARARI+KAGGECLTFDQLALR PL  +TVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFE+ARG+R SRG+RV
Subjt:  FTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

P12001 60S ribosomal protein L181.7e-6367.38Show/hide
Query:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMK--GKESKIAVVVGTITDDIRVYEVPALKV
        G+D +   K +K +R  PKS DIYL+LLVKLYRFL RRT S FN V+LKRLFMS+ N+PPLSLSR+I+ MK  G+E+K AVVVGTITDD+R+ EVP LKV
Subjt:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMK--GKESKIAVVVGTITDDIRVYEVPALKV

Query:  AALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYR
         ALR +  AR+RI KAGG+ LTFDQLAL +P G+ TVLL GP+  RE  +HFG APG PHSH+KPYVRSKGRKFERARG+R SRGY+
Subjt:  AALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYR

P42791 60S ribosomal protein L18-21.3e-8787.1Show/hide
Query:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAA
        GIDL+AGGKSKKTKR APKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK PLSLSRL++FM GKE KIAV+VGTITDD+RV+E+PA+KV A
Subjt:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAA

Query:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        LRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVR+KGRKFE+ARGKR SRG++V
Subjt:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

Q940B0 60S ribosomal protein L18-33.8e-8786.56Show/hide
Query:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAA
        GIDL+AGGKSKKTKR APKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK PLSLSRL++FM GK+ KIAV+VGTITDD+RV+E+PA+KV A
Subjt:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAA

Query:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        LRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS++KPYVR KGRKFE+ARGKR SRG++V
Subjt:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

Arabidopsis top hitse value%identityAlignment
AT1G09150.1 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein5.1e-3987.21Show/hide
Query:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK
        M++ QVDRGAIKFVL+GANIMCPGLTSPGGVLD EVEAE PVAI AEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWK
Subjt:  MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK

AT2G47570.1 Ribosomal protein L18e/L15 superfamily protein1.8e-5274.81Show/hide
Query:  MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFG
        MSKVNK PLSLSRL+++M GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFG
Subjt:  MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFG

Query:  PAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        PAPGVPHSH+KPYVR  G+K E ARG+R SRG++V
Subjt:  PAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

AT2G47570.2 Ribosomal protein L18e/L15 superfamily protein1.8e-5274.81Show/hide
Query:  MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFG
        MSKVNK PLSLSRL+++M GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFG
Subjt:  MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFG

Query:  PAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        PAPGVPHSH+KPYVR  G+K E ARG+R SRG++V
Subjt:  PAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

AT3G05590.1 ribosomal protein L189.2e-8987.1Show/hide
Query:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAA
        GIDL+AGGKSKKTKR APKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK PLSLSRL++FM GKE KIAV+VGTITDD+RV+E+PA+KV A
Subjt:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAA

Query:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        LRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVR+KGRKFE+ARGKR SRG++V
Subjt:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

AT5G27850.1 Ribosomal protein L18e/L15 superfamily protein2.7e-8886.56Show/hide
Query:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAA
        GIDL+AGGKSKKTKR APKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK PLSLSRL++FM GK+ KIAV+VGTITDD+RV+E+PA+KV A
Subjt:  GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAA

Query:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
        LRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS++KPYVR KGRKFE+ARGKR SRG++V
Subjt:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAATTACAAGTCGACAGAGGTGCAATAAAGTTTGTCCTTGCTGGTGCTAACATAATGTGTCCTGGTCTTACATCCCCTGGGGGTGTCTTGGATGATGAAGTAGA
AGCTGAAACACCTGTGGCAATAATGGCGGAAGGGAAGCAACATGCTCTTGCTATTGGCTTCACAAAGATGTCAGCGAAGGAAATAAGGGCGACAAACAAAGGGATCGGAG
TGGACAACATGCATTACCTTAACGATGGTCTTTGGAAGGGGATCGATCTCGTAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGGTTGCTCCCAAATCTGATGATATCTAC
CTAAAGTTACTCGTCAAGCTTTACCGCTTTCTTGTTCGTCGAACTGGAAGCAATTTCAATGCTGTGATTCTCAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCACT
TTCCCTCTCTCGGCTTATCCAGTTCATGAAAGGAAAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAG
TTGCAGCTTTGAGGTTCACTGAGACAGCAAGGGCAAGGATCGAAAAGGCTGGTGGGGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACG
GTTCTTCTTAGAGGTCCTAAGAATTCTCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTGCCACACAGCCATTCCAAGCCATATGTGAGGTCGAAGGGAAGGAA
GTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATTCTTTGTTTCTTTCTAGGCCTTTTTGTCATTATTTGTTCTGTACCATTTTACTTGACTGGAGCCTCTCCTCGTAGTTGGATCCCTTTTGTGGGTATGATTTTGGTACT
CTGTGTAAAAGAAAAAGAGAAAAAGATCTTCAAACTACAAGTAAGATTAATGAAACCTCCAAGGGTTCTTTGGGAGGCGTTTGATTGAAGCCTATTCAAACTATGCTCCA
AGAACTAAGCGATTGCTTTGGGGAAGTGCCAATTCACTAGTGGTTATCAACAATCTTCGAAGGTTCCATGGTTAACTAATGGTTGTACTGATAATGCCATTTTGAAGGTT
ATGGAACATATTTTTTACGCTAATATCATTTTGAAGACCAAAAAATTTTGGTATCAGACAAATATTCTTGGAGAACAAATCTAGATTCACACATTCACTTCAGTTCTTCA
TCACTAACTGCTTAAGCAAATGTTTGGTATTTAAATGCTTTCGCTCAATCACCCTCCTCCTCAAAGGTTGTCCAAGCCAACCAAAACTCCATTATATCTATTGTCTTAAT
TAACAAGCCTTTCTGTTGTACTTCATCACTATATTCTTTCCGGAACCTCAGTTCCAGATTATGACTTGTATTGTCCTATTCGGTTTGCAGATCCCAACATTATGAGAAAA
TTACAAGTCGACAGAGGTGCAATAAAGTTTGTCCTTGCTGGTGCTAACATAATGTGTCCTGGTCTTACATCCCCTGGGGGTGTCTTGGATGATGAAGTAGAAGCTGAAAC
ACCTGTGGCAATAATGGCGGAAGGGAAGCAACATGCTCTTGCTATTGGCTTCACAAAGATGTCAGCGAAGGAAATAAGGGCGACAAACAAAGGGATCGGAGTGGACAACA
TGCATTACCTTAACGATGGTCTTTGGAAGGGGATCGATCTCGTAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGGTTGCTCCCAAATCTGATGATATCTACCTAAAGTTA
CTCGTCAAGCTTTACCGCTTTCTTGTTCGTCGAACTGGAAGCAATTTCAATGCTGTGATTCTCAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCACTTTCCCTCTC
TCGGCTTATCCAGTTCATGAAAGGAAAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAGTTGCAGCTT
TGAGGTTCACTGAGACAGCAAGGGCAAGGATCGAAAAGGCTGGTGGGGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTTCTT
AGAGGTCCTAAGAATTCTCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTGCCACACAGCCATTCCAAGCCATATGTGAGGTCGAAGGGAAGGAAGTTTGAGAG
GGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGA
Protein sequenceShow/hide protein sequence
MRKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRVAPKSDDIY
LKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNT
VLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV