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IVF0020289 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020289
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosystem II reaction center protein H
Genome locationchr01:11701735..11701955
RNA-Seq ExpressionIVF0020289
SyntenyIVF0020289
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0050821 - protein stabilization (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0009536 - plastid (cellular component)
GO:0042301 - phosphate ion binding (molecular function)
InterPro domainsIPR001056 - Photosystem II reaction centre protein H
IPR036863 - Photosystem II reaction centre protein H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM91195.1 photosystem II phosphoprotein [Lagenaria siceraria]1.45e-1965.75Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        M TQT+DDSSR  P+R +V             V PGWGTTPLM V MGLFAIFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
QHB75993.1 photosystem II protein H [Cucumis melo subsp. melo]5.06e-2067.12Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+DDSS+  P+R VV             V PGWGTTPLM V MGLFAIFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
YP_004841812.1 photosystem II phosphoprotein [Cucumis melo subsp. melo]1.76e-2068.49Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+DDSSR  P+R VV             V PGWGTTPLM V MGLFAIFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
YP_009326018.1 photosystem II protein H [Citrullus lanatus]2.51e-2067.12Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+DDSSR  P+R +V             V PGWGTTPLM V MGLFAIFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
YP_009346513.1 photosystem II phosphoprotein [Cucumis x hytivus]7.18e-2067.12Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+DDSSR  P+R VV             V PGWGTTPLM V MGLF IFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
TrEMBL top hitse value%identityAlignment
A0A1S4EU35 Photosystem II reaction center protein H1.7e-1468.49Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+DDSSR  P+R VV             V PGWGTTPLM V MGLFAIFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
A0A249RXR3 Photosystem II reaction center protein H1.7e-1468.49Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+DDSSR  P+R VV             V PGWGTTPLM V MGLFAIFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
A0A249RZ09 Photosystem II reaction center protein H1.7e-1468.49Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+DDSSR  P+R VV             V PGWGTTPLM V MGLFAIFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
A0A249RZ75 Photosystem II reaction center protein H1.7e-1468.49Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+DDSSR  P+R VV             V PGWGTTPLM V MGLFAIFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
A0A286NFZ2 Photosystem II reaction center protein H1.7e-1468.49Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+DDSSR  P+R VV             V PGWGTTPLM V MGLFAIFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
SwissProt top hitse value%identityAlignment
A0A364 Photosystem II reaction center protein H1.8e-1360.27Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+D+SSR  P+R  V             V PGWGTTPLM V M LFA+FL IILEIYNSS LL GIS N
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
A0ZZ64 Photosystem II reaction center protein H2.3e-1361.64Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT++ SSR  P+R VV             V PGWGTTPLM V M LFAIFL IILEIYNSS LL GIS N
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
Q2L934 Photosystem II reaction center protein H2.3e-1361.64Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT++ SSR  P+R VV             V PGWGTTPLM V M LFAIFL IILEIYNSS LL GIS N
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
Q2PMQ6 Photosystem II reaction center protein H8.0e-1461.64Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT++D+SR  P+R VV             V PGWGTTPLM V M LFAIFL IILEIYNSS LL GIS N
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
Q4VZI9 Photosystem II reaction center protein H5.0e-1665.75Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT+DDSS+  P+R VV             V PGWGTTPLM V M LFAIFLCIILEIYNSS LL GISSN
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
Arabidopsis top hitse value%identityAlignment
ATCG00710.1 photosystem II reaction center protein H6.2e-1458.9Show/hide
Query:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN
        MATQT++DSSR  P+   V             V PGWGTTPLM V M LFA+FL IILEIYNSS LL GIS N
Subjt:  MATQTIDDSSRFVPKRIVV-------------VVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACACAAACCATTGACGATAGTTCTAGATTTGTGCCAAAACGAATTGTTGTAGTGGTTCCTGGGTGGGGAACTACACCTTTAATGAGTGTTGTGATGGGTTTATT
TGCGATATTCCTATGTATTATTTTGGAGATTTATAATTCTTCCAATTTACTGGTTGGAATTTCAAGCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACACAAACCATTGACGATAGTTCTAGATTTGTGCCAAAACGAATTGTTGTAGTGGTTCCTGGGTGGGGAACTACACCTTTAATGAGTGTTGTGATGGGTTTATT
TGCGATATTCCTATGTATTATTTTGGAGATTTATAATTCTTCCAATTTACTGGTTGGAATTTCAAGCAATTAG
Protein sequenceShow/hide protein sequence
MATQTIDDSSRFVPKRIVVVVPGWGTTPLMSVVMGLFAIFLCIILEIYNSSNLLVGISSN