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IVF0020291 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020291
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Genome locationchr04:28641840..28642981
RNA-Seq ExpressionIVF0020291
SyntenyIVF0020291
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR014012 - Helicase/SANT-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB93633.1 hypothetical protein L484_018018 [Morus notabilis]7.86e-6190.27Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        M SKGPRSKLDHESRAKRQKALEA REP RPKTHWDHVLEEMVWLSKDFESERKWKLAQAK+VAL+ASKGM+DQATR E+KLKEEEQRL+K+ALNISKDV
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKLASS
        KKFW+KIEKLASS
Subjt:  KKFWMKIEKLASS

KAA0043726.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucumis melo var. makuwa]1.63e-5999.1Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKLA
        KKFWMKIEKL 
Subjt:  KKFWMKIEKLA

XP_011652096.2 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1 [Cucumis sativus]4.12e-5998.2Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        MTSKGPRSKLDHESRAKRQKALEAS+EPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKLA
        KKFWMKIEKL 
Subjt:  KKFWMKIEKLA

XP_016899687.1 PREDICTED: LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucumis melo]1.63e-5999.1Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKLA
        KKFWMKIEKL 
Subjt:  KKFWMKIEKLA

XP_031739104.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X2 [Cucumis sativus]4.12e-5998.2Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        MTSKGPRSKLDHESRAKRQKALEAS+EPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKLA
        KKFWMKIEKL 
Subjt:  KKFWMKIEKLA

TrEMBL top hitse value%identityAlignment
A0A0A0LBB6 Uncharacterized protein3.5e-5199.09Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        MTSKGPRSKLDHESRAKRQKALEAS+EPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKL
        KKFWMKIEKL
Subjt:  KKFWMKIEKL

A0A1S4DUM1 LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 11.6e-51100Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKL
        KKFWMKIEKL
Subjt:  KKFWMKIEKL

A0A5A7TNS3 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 11.6e-51100Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKL
        KKFWMKIEKL
Subjt:  KKFWMKIEKL

A0A7J6FJ28 Uncharacterized protein6.3e-4890.27Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        M SKGPRSKLDHESRAKRQKALEA REP RPKTHWDHVLEEMVWLSKDFESERKWKL+QAK+VALRASKGM+DQATR E+KLKEEEQRL+K+ALNISKDV
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKLASS
        KKFW+KIEKLASS
Subjt:  KKFWMKIEKLASS

A0A7J6FV72 Uncharacterized protein6.3e-4890.27Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        M SKGPRSKLDHESRAKRQKALEA REP RPKTHWDHVLEEMVWLSKDFESERKWKL+QAK+VALRASKGM+DQATR E+KLKEEEQRL+K+ALNISKDV
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKLASS
        KKFW+KIEKLASS
Subjt:  KKFWMKIEKLASS

SwissProt top hitse value%identityAlignment
Q6ZRS2 Helicase SRCAP3.9e-1543.96Show/hide
Query:  KALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKL
        K L    EP RPK HWD++ EEM WLS DF  ER+WK   A++V     +   +Q  +EER  +EE+ +LR++A  ++KDV++FW  +EK+
Subjt:  KALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKL

Q7X9V2 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 12.8e-4584.55Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        M SK  +SK D+ESRAKRQK LEA +EP RPKTHWDHVLEEM WLSKDFESERKWKLAQAK+VALRASKGM+DQA+REERKLKEEEQRLRK+ALNISKD+
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKL
        KKFWMK+EKL
Subjt:  KKFWMKIEKL

Q8CHI8 E1A-binding protein p4006.7e-1541.76Show/hide
Query:  KALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKL
        + L   +E  RPK+HWD++LEEM W++ DF  ER+WKLA AK++    ++   ++  REER  KEE+ RLR++A   +++++ FW  IE++
Subjt:  KALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKL

Q96L91 E1A-binding protein p4001.1e-1441.3Show/hide
Query:  QKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKL
        Q+ L   +E  RPK+HWD++LEEM W++ DF  ER+WK+A AK++     +   ++  REER  KEE+ RLR++A + +++++ FW  IE++
Subjt:  QKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKL

Q9NDJ2 Helicase domino2.1e-1646.74Show/hide
Query:  QKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKL
        ++ L   +EP+RPK HWD++LEEMVWL+ DF  ERKWK   AK+ A    K   D+AT  +R  K +E +L+++A  I+++VK FW  +EKL
Subjt:  QKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKL

Arabidopsis top hitse value%identityAlignment
AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein2.0e-4684.55Show/hide
Query:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV
        M SK  +SK D+ESRAKRQK LEA +EP RPKTHWDHVLEEM WLSKDFESERKWKLAQAK+VALRASKGM+DQA+REERKLKEEEQRLRK+ALNISKD+
Subjt:  MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDV

Query:  KKFWMKIEKL
        KKFWMK+EKL
Subjt:  KKFWMKIEKL

AT3G24870.1 Helicase/SANT-associated, DNA binding protein3.1e-0734.69Show/hide
Query:  ESRAKRQKALEASREP--NRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIE
        +++ KR   L     P   R K+ WD VLEEM WL+ DF  ER WK+  A ++  R +  +  Q   EER    + ++L+K+A  +S  + +FW  +E
Subjt:  ESRAKRQKALEASREP--NRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIE

AT3G24870.2 Helicase/SANT-associated, DNA binding protein3.1e-0734.69Show/hide
Query:  ESRAKRQKALEASREP--NRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIE
        +++ KR   L     P   R K+ WD VLEEM WL+ DF  ER WK+  A ++  R +  +  Q   EER    + ++L+K+A  +S  + +FW  +E
Subjt:  ESRAKRQKALEASREP--NRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIE

AT3G24880.1 Helicase/SANT-associated, DNA binding protein1.8e-0734.69Show/hide
Query:  ESRAKRQKALEASREP--NRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIE
        +++ KR   L     P   R K+ WD VLEEM WL+ DF  ER WK+  A ++  R +  +  Q   EER    + ++L+K+A  +S  + +FW  +E
Subjt:  ESRAKRQKALEASREP--NRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTAAAGGTCCCAGGTCTAAACTTGATCACGAGTCGAGAGCTAAGCGCCAAAAGGCACTTGAAGCTTCAAGAGAACCCAATCGACCTAAAACACATTGGGATCA
TGTTTTAGAAGAAATGGTTTGGCTATCAAAGGACTTTGAGTCTGAGCGGAAATGGAAATTAGCTCAGGCAAAAAGGGTTGCTCTAAGAGCTAGCAAAGGCATGGTAGATC
AAGCAACAAGGGAAGAAAGGAAGTTGAAGGAGGAGGAGCAACGATTGAGAAAACTTGCTCTCAATATTTCAAAGGATGTAAAGAAGTTCTGGATGAAAATAGAAAAGCTG
GCAAGTTCATTGACACAATACTATTTTGGTTTCTTTTGGATGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTAAAGGTCCCAGGTCTAAACTTGATCACGAGTCGAGAGCTAAGCGCCAAAAGGCACTTGAAGCTTCAAGAGAACCCAATCGACCTAAAACACATTGGGATCA
TGTTTTAGAAGAAATGGTTTGGCTATCAAAGGACTTTGAGTCTGAGCGGAAATGGAAATTAGCTCAGGCAAAAAGGGTTGCTCTAAGAGCTAGCAAAGGCATGGTAGATC
AAGCAACAAGGGAAGAAAGGAAGTTGAAGGAGGAGGAGCAACGATTGAGAAAACTTGCTCTCAATATTTCAAAGGATGTAAAGAAGTTCTGGATGAAAATAGAAAAGCTG
GCAAGTTCATTGACACAATACTATTTTGGTTTCTTTTGGATGAGATGA
Protein sequenceShow/hide protein sequence
MTSKGPRSKLDHESRAKRQKALEASREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKL
ASSLTQYYFGFFWMR