; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020297 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020297
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:28578264..28579401
RNA-Seq ExpressionIVF0020297
SyntenyIVF0020297
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039748.1 uncharacterized protein E6C27_scaffold122G00080 [Cucumis melo var. makuwa]2.53e-111100Show/hide
Query:  MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP
        MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP
Subjt:  MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP

Query:  DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDD
        DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDD
Subjt:  DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDD

XP_004146827.2 uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus]1.30e-14378.35Show/hide
Query:  SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPD
        SFNF+VNNM+TL+DA ATLG+AD   DATFSPEMFC+M DSNVSIHS IGLQLWPPFFDHYFC +L+ SWFFF+EIFPLAQ L+D GYTSFSFSIG +P 
Subjt:  SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPD

Query:  LAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQFI
         AQI+FQGP  LL E    LV+ H PLRI  FDLSVFVSMDSQ+FSN+ISQYHMFDDVHVTITSERVIFSYS MQETIL+ QNGQCIIGG++AP++V+F+
Subjt:  LAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQFI

Query:  LTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR
        +TLGP EVFNHIASQTKRVWFFKQCNSN+GLITAPLGLN+RLVA F DVFA +R
Subjt:  LTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR

XP_008459734.1 PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo]2.91e-187100Show/hide
Query:  MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP
        MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP
Subjt:  MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP

Query:  DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQF
        DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQF
Subjt:  DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQF

Query:  ILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR
        ILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR
Subjt:  ILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR

XP_011652354.1 uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus]6.16e-13977.17Show/hide
Query:  SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPD
        SFNF+VNNM+TL+DA ATLG+AD   DATFSPEMFC+M DSNVSIHS IGLQLWPPFFDHYFC +L+ SWFFF+EIFPLAQ L+D GYTSFSFSIG +P 
Subjt:  SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPD

Query:  LAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQFI
         AQI+FQGP  LL E    LV+ H PLRI  FDLSVFVSMDSQ+FSN+ISQYHMFDDVHVTITSERVIFSYS MQETIL+ Q   CIIGG++AP++V+F+
Subjt:  LAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQFI

Query:  LTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR
        +TLGP EVFNHIASQTKRVWFFKQCNSN+GLITAPLGLN+RLVA F DVFA +R
Subjt:  LTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR

XP_038876014.1 uncharacterized protein LOC120068348 [Benincasa hispida]5.03e-12266.67Show/hide
Query:  MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFC-SELQYSWFFFNEIFPLAQDLQDSGYTSFSFSI-GP
        M FNFVVN+M+TLI+A   +G+ D +AD TFSPEM C+M DS VSI + IG+QLWPPFFDHYFC + LQ SWF+  +IFPL  +L DSGYTSF+FSI  P
Subjt:  MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFC-SELQYSWFFFNEIFPLAQDLQDSGYTSFSFSI-GP

Query:  NPDLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQV
          + A++KF+GPNGLLHE  F+L YSHHPL + +FDLSVFVS+DSQEFS+++ +YHMFD VHVTITS RV FSY+I+QETIL  Q+GQC+IGG++APNQ+
Subjt:  NPDLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQV

Query:  QFILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAE
        QFI+TL P+EVF HIA + KR+WFFK  NS KG+ITAP+GLN RLVA F DVFAE
Subjt:  QFILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAE

TrEMBL top hitse value%identityAlignment
A0A0A0KFM5 Uncharacterized protein2.9e-7657.71Show/hide
Query:  SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSEL-QYSWFFFNEIFPLAQDLQDSGYTSFSFSIGP-N
        SF   V++M+ LID+L TLG+ D +ADA FSP+ FC+M DS+ SIHS  G+QLWPPFFD ++  ++ Q  WF    +F LA +L +SGYTS +FSI    
Subjt:  SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSEL-QYSWFFFNEIFPLAQDLQDSGYTSFSFSIGP-N

Query:  PDLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQ
         + AQ KF+GPNGLL + NF L     PLRI   DLS FVSMDS+EFSN+IS+YHMFD V V ITS RV FSY+I+QETI+  ++GQC+IGG++APNQVQ
Subjt:  PDLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQ

Query:  FILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFA
        FI+T+     F H ASQ+KR+W FK+ NS KG+ITAPLGL  RLV+ F DV A
Subjt:  FILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFA

A0A0A0LIF2 Uncharacterized protein2.5e-11278.35Show/hide
Query:  SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPD
        SFNF+VNNM+TL+DA ATLG+AD   DATFSPEMFC+M DSNVSIHS IGLQLWPPFFDHYFC +L+ SWFFF+EIFPLAQ L+D GYTSFSFSIG +P 
Subjt:  SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPD

Query:  LAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQFI
         AQI+FQGP  LL E    LV+ H PLRI  FDLSVFVSMDSQ+FSN+ISQYHMFDDVHVTITSERVIFSYS MQETIL+ QNGQCIIGG++AP++V+F+
Subjt:  LAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQFI

Query:  LTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR
        +TLGP EVFNHIASQTKRVWFFKQCNSN+GLITAPLGLN+RLVA F DVFA +R
Subjt:  LTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR

A0A1S3CBB9 uncharacterized protein LOC1034987761.7e-145100Show/hide
Query:  MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP
        MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP
Subjt:  MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP

Query:  DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQF
        DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQF
Subjt:  DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQF

Query:  ILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR
        ILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR
Subjt:  ILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR

A0A5A7TA03 Uncharacterized protein3.1e-86100Show/hide
Query:  MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP
        MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP
Subjt:  MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNP

Query:  DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDD
        DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDD
Subjt:  DLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDD

A0A5D3DMK7 Uncharacterized protein1.4e-7558.4Show/hide
Query:  SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSEL-QYSWFFFNEIFPLAQDLQDSGYTSFSFSIGP-N
        SF   VN+M+ LID L TLG+ D +AD  FSP+MFC+M DS+VSIHS  G++L PPFFD ++  E+ Q  WF    +FPLA  L +SGYTSF+FSI    
Subjt:  SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSEL-QYSWFFFNEIFPLAQDLQDSGYTSFSFSIGP-N

Query:  PDLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQ
         + AQ +F+GPNGLL E NF L     PL I + DLS FV+MDSQEFSN+IS+YHMFD V V IT+ RV FSY+I+QETI+  Q+GQCIIGGI+ PN+VQ
Subjt:  PDLAQIKFQGPNGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQ

Query:  FILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFD
        FI+T+   + F H ASQ+KR+W FK+ NS KG+ITAPLGL+ RLV+ F D
Subjt:  FILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRLVACFFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTCAATTTCGTCGTCAACAATATGCAAACTCTGATAGATGCTTTAGCCACATTGGGAGTGGCGGATCAACTGGCAGATGCAACATTTTCACCGGAAATGTTCTG
CGTAATGGTGGATTCAAATGTTTCCATTCACAGCACCATTGGCCTTCAACTCTGGCCTCCATTCTTTGATCATTATTTCTGCAGCGAGCTTCAATATTCTTGGTTCTTTT
TCAATGAAATTTTCCCTCTTGCTCAAGATTTGCAGGATTCCGGTTACACTTCTTTCTCCTTCTCTATTGGCCCTAACCCTGACCTAGCCCAAATCAAATTCCAAGGCCCC
AATGGGCTTCTTCATGAAACTAATTTCGAGTTGGTTTATTCCCATCATCCACTGCGCATCCCCGATTTTGATCTGTCTGTTTTTGTTTCCATGGATTCTCAAGAATTCTC
CAACGTTATCTCTCAGTATCATATGTTTGATGACGTTCATGTCACTATAACGAGTGAACGAGTGATATTTTCTTATTCAATTATGCAAGAGACAATTCTTAATCAACAGA
ATGGGCAGTGCATAATCGGAGGTATTAAAGCACCAAATCAAGTTCAATTCATTTTAACTTTGGGTCCATCAGAAGTTTTCAACCATATTGCAAGTCAAACGAAGAGGGTA
TGGTTTTTTAAGCAATGTAATTCCAATAAAGGTTTAATTACAGCCCCTCTTGGATTGAATAGTCGACTTGTTGCTTGTTTCTTTGATGTCTTTGCCGAACATCGATGA
mRNA sequenceShow/hide mRNA sequence
TAAGAAAAGAAAAACCATGTCGTTCAATTTCGTCGTCAACAATATGCAAACTCTGATAGATGCTTTAGCCACATTGGGAGTGGCGGATCAACTGGCAGATGCAACATTTT
CACCGGAAATGTTCTGCGTAATGGTGGATTCAAATGTTTCCATTCACAGCACCATTGGCCTTCAACTCTGGCCTCCATTCTTTGATCATTATTTCTGCAGCGAGCTTCAA
TATTCTTGGTTCTTTTTCAATGAAATTTTCCCTCTTGCTCAAGATTTGCAGGATTCCGGTTACACTTCTTTCTCCTTCTCTATTGGCCCTAACCCTGACCTAGCCCAAAT
CAAATTCCAAGGCCCCAATGGGCTTCTTCATGAAACTAATTTCGAGTTGGTTTATTCCCATCATCCACTGCGCATCCCCGATTTTGATCTGTCTGTTTTTGTTTCCATGG
ATTCTCAAGAATTCTCCAACGTTATCTCTCAGTATCATATGTTTGATGACGTTCATGTCACTATAACGAGTGAACGAGTGATATTTTCTTATTCAATTATGCAAGAGACA
ATTCTTAATCAACAGAATGGGCAGTGCATAATCGGAGGTATTAAAGCACCAAATCAAGTTCAATTCATTTTAACTTTGGGTCCATCAGAAGTTTTCAACCATATTGCAAG
TCAAACGAAGAGGGTATGGTTTTTTAAGCAATGTAATTCCAATAAAGGTTTAATTACAGCCCCTCTTGGATTGAATAGTCGACTTGTTGCTTGTTTCTTTGATGTCTTTG
CCGAACATCGATGA
Protein sequenceShow/hide protein sequence
MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPDLAQIKFQGP
NGLLHETNFELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQNGQCIIGGIKAPNQVQFILTLGPSEVFNHIASQTKRV
WFFKQCNSNKGLITAPLGLNSRLVACFFDVFAEHR